Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G32120 350 / 2e-112 unknown protein AT1G55240 127 / 1e-34 Family of unknown function (DUF716) (.1) AT1G55230 124 / 6e-34 Family of unknown function (DUF716) (.1) AT1G49470 106 / 5e-27 Family of unknown function (DUF716) (.1) AT5G19870 97 / 1e-23 Family of unknown function (DUF716) (.1) AT3G01360 42 / 0.0002 Family of unknown function (DUF716) (.1), Family of unknown function (DUF716) (.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10038547 [exp] 440 / 6e-158 AT1G32120 429 / 3e-142 unknown protein Lus10039191 [exp] 110 / 2e-28 AT1G55230 391 / 1e-137 Family of unknown function (DUF716) (.1) Lus10013749 [exp] 108 / 1e-27 AT1G55230 386 / 1e-135 Family of unknown function (DUF716) (.1) Lus10023842 [exp] 98 / 1e-23 AT1G49470 275 / 6e-92 Family of unknown function (DUF716) (.1) Lus10021008 [exp] 87 / 5e-20 AT1G49470 257 / 2e-85 Family of unknown function (DUF716) (.1) Lus10011779 [exp] 44 / 6e-05 AT1G32120 69 / 9e-13 unknown protein
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.003G100700 [exp] 361 / 1e-126 AT1G32120 382 / 2e-124 unknown protein Potri.001G132800 [exp] 354 / 6e-124 AT1G32120 377 / 2e-122 unknown protein Potri.003G216500 [exp] 137 / 2e-38 AT1G55230 383 / 3e-134 Family of unknown function (DUF716) (.1) Potri.001G009000 [exp] 127 / 7e-35 AT1G55230 364 / 7e-127 Family of unknown function (DUF716) (.1) Potri.003G216600 [exp] 115 / 3e-30 AT1G55230 419 / 9e-149 Family of unknown function (DUF716) (.1) Potri.009G108900 [exp] 114 / 8e-30 AT1G49470 308 / 5e-105 Family of unknown function (DUF716) (.1) Potri.001G008900 [exp] 97 / 3e-23 AT1G55230 345 / 3e-119 Family of unknown function (DUF716) (.1) Potri.005G122800 [exp] 47 / 8e-06 AT3G01360 240 / 1e-77 Family of unknown function (DUF716) (.1), Family of unknown function (DUF716) (.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF04819 [flax] [poplar] DUF716 Family of unknown function (DUF716)
Representative CDS sequence Show only first row Show all	>Lus10014806 pacid=23150219 polypeptide=Lus10014806 locus=Lus10014806.g ID=Lus10014806.BGIv1.0 annot-version=v1.0 ATGGGTTCCTTCAAAGGTCATGTTGTACCAGGATCATTGTTTTTTATCATTGGTGTATGGCACATATGGTGTTCCTTGGTTCGCTATGTCTCCAATCCAA AGTGTTTCCGTGTACGTGTTTGGAATCCCGTCCCTGGTTTTGAAGGGAAGTTGAAGTACTTGGAGATCTACGTTATCGTTATTGGAGCCTTTATAGACCT ATGTATTGAGCTTTTGTACTCAACACACCTCAGGTTTTTCGTTAATGGAGTGCTGAATCCTAGTCACATGAACAATTTTGAACACTCAGGAATGTTATTG ATGTTCTTTATCCTTGGTGTTATCACTTTGCTATCCGAGACAACAAGATTTCTAACTTTGCCAGAAGGAGCTCTTAGTTTGGTAGCTGCCGCAGCATTCT GTGCAGAGTACTTGCTGTTTTACTTCCATTCAACAACCCATAAGGGCCTCGAAGGTTTTTACCATCTCATTCTGGTCCTCCTGATAGGACTCTGTTTAGT GTCTGCTGTTGCTGGAGCAATCCTACCGACAAGCTTTCCAGTTGACTTGTCTAATGGCATTGCCATGACTCTTCAAGGCCTCTGGTTCTATCAGACAGCC TTCAGCCTCTACGGCCCAATGATGCCAAATGGTTGTAGCCTCAAAGAAGATCAAATTGTATGCGAGTCTGGAGTCAGCCGGGTTCGAGGCGAGTTGCTGG CTAACTTTCAGCTCTTCTTCTTGGTCTTTGGGGTACTTGTCGCGGTTGTCGTCGCATATTGTTTTGCAGCTTCAAGATATGGGAACCGTTTGCTGATTAC ACACCCAAGATAA
AA sequence Show only first row Show all	>Lus10014806 pacid=23150219 polypeptide=Lus10014806 locus=Lus10014806.g ID=Lus10014806.BGIv1.0 annot-version=v1.0 MGSFKGHVVPGSLFFIIGVWHIWCSLVRYVSNPKCFRVRVWNPVPGFEGKLKYLEIYVIVIGAFIDLCIELLYSTHLRFFVNGVLNPSHMNNFEHSGMLL MFFILGVITLLSETTRFLTLPEGALSLVAAAAFCAEYLLFYFHSTTHKGLEGFYHLILVLLIGLCLVSAVAGAILPTSFPVDLSNGIAMTLQGLWFYQTA FSLYGPMMPNGCSLKEDQIVCESGVSRVRGELLANFQLFFLVFGVLVAVVVAYCFAASRYGNRLLITHPR

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G32120			unknown protein		Lus10014806 [exp]	0	1
AT4G38260			Protein of unknown function (D...		Lus10012253 [exp]	1.7	0.8940
AT1G08230		ATGAT1	L-GAMMA-AMINOBUTYRIC ACID TRAN...		Lus10038640 [exp]	3.7	0.8911
AT3G49420			Got1/Sft2-like vescicle transp...		Lus10026704 [exp]	17.6	0.8727
AT4G39870			TLD-domain containing nucleola...		Lus10041697 [exp]	25.0	0.8801
AT5G03560			Tetratricopeptide repeat (TPR)...		Lus10027932 [exp]	25.5	0.8748
AT2G44180		MAP2A	methionine aminopeptidase 2A (...		Lus10000403 [exp]	29.5	0.8709
AT4G17720			RNA-binding (RRM/RBD/RNP motif...		Lus10025743 [exp]	31.4	0.8609
AT1G63855			Putative methyltransferase fam...		Lus10028415 [exp]	32.8	0.8552
AT5G51160			Ankyrin repeat family protein ...		Lus10041537 [exp]	36.4	0.8632
AT2G14255			Ankyrin repeat family protein ...		Lus10012455 [exp]	38.5	0.8423

Compare expression of checked genes

Lus10014806 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.