Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G22380 290 / 6e-93 ATUGT85A3 UDP-glucosyl transferase 85A3 (.1) AT1G78270 286 / 3e-91 ATUGT85A4 UDP-glucosyl transferase 85A4 (.1) AT1G22360 282 / 9e-90 ATUGT85A2, AT2 UDP-glucosyl transferase 85A2 (.1.2) AT1G22400 276 / 1e-87 ATUGT85A1, UGT85A1 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) AT1G22370 276 / 2e-87 ATUGT85A5 UDP-glucosyl transferase 85A5 (.1.2) AT1G22340 275 / 4e-87 ATUGT85A7 UDP-glucosyl transferase 85A7 (.1) AT3G11340 225 / 3e-68 UGT76B1 UDP-dependent glycosyltransferase 76B1, UDP-Glycosyltransferase superfamily protein (.1) AT3G46660 223 / 3e-67 UGT76E12 UDP-glucosyl transferase 76E12 (.1) AT5G05880 220 / 3e-66 UDP-Glycosyltransferase superfamily protein (.1) AT5G05860 218 / 1e-65 UGT76C2 UDP-glucosyl transferase 76C2 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10009876 [exp] 924 / 0 AT1G22380 295 / 2e-94 UDP-glucosyl transferase 85A3 (.1) Lus10004670 [exp] 493 / 6e-172 AT1G22340 313 / 1e-101 UDP-glucosyl transferase 85A7 (.1) Lus10017201 [exp] 360 / 4e-120 AT1G22380 337 / 4e-111 UDP-glucosyl transferase 85A3 (.1) Lus10031388 [exp] 312 / 3e-101 AT1G22400 644 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) Lus10013924 [exp] 294 / 3e-94 AT1G22400 551 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) Lus10013925 [exp] 290 / 6e-93 AT1G22380 560 / 0.0 UDP-glucosyl transferase 85A3 (.1) Lus10032218 [exp] 286 / 3e-91 AT1G22380 564 / 0.0 UDP-glucosyl transferase 85A3 (.1) Lus10000993 [exp] 285 / 1e-90 AT1G22380 563 / 0.0 UDP-glucosyl transferase 85A3 (.1) Lus10032220 [exp] 284 / 2e-90 AT1G22380 601 / 0.0 UDP-glucosyl transferase 85A3 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.008G062400 [exp] 575 / 0 AT1G22380 344 / 8e-114 UDP-glucosyl transferase 85A3 (.1) Potri.016G105400 [exp] 405 / 1e-137 AT1G22380 324 / 6e-106 UDP-glucosyl transferase 85A3 (.1) Potri.016G105300 [exp] 404 / 5e-137 AT1G22380 327 / 8e-107 UDP-glucosyl transferase 85A3 (.1) Potri.002G098400 [exp] 327 / 3e-107 AT1G22360 640 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.002G098300 [exp] 302 / 3e-97 AT1G22360 602 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.001G313000 [exp] 300 / 1e-96 AT1G22360 564 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.016G021500 [exp] 296 / 3e-95 AT1G22360 501 / 3e-175 UDP-glucosyl transferase 85A2 (.1.2) Potri.006G023101 [exp] 294 / 3e-94 AT1G22360 516 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.017G052400 [exp] 293 / 6e-94 AT1G22360 620 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.007G095000 [exp] 291 / 2e-93 AT1G22340 543 / 0.0 UDP-glucosyl transferase 85A7 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [flax] [poplar] GT-B PF00201 [flax] [poplar] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Lus10014831 pacid=23150181 polypeptide=Lus10014831 locus=Lus10014831.g ID=Lus10014831.BGIv1.0 annot-version=v1.0 ATGGAACATTCCGGTCGACCGCCGCCTCACGTTTTAATATTCCCTTACCCGTTGCAAGGCCACGTCACCTCCATGCTAAACTTAGCAGAGGTGCTCTGCC TCTCCAACATCAGAGTCACCTTCCTCAACTCCGACCACATCCAGCGCCGCCTCCTCCAGTTCACCTCCGTCCAATCCCGTTTCGCCAAATACCCTAATCT CTTCCACTTCCAAACCATTTCCGACGGCCTGCCGCCCGACCACTCCCGCAGCGGAAAAGACGTCTTGGACCTCTTTCTGTCGATGAGCTCCATAACCAGG CCCCTTTTCAAGGAGCTGCTCATCTCAAATCAACCTCCCATTGACTGTGTAATTAGCGACGGAGGTTTAGAGTTCACCGTGGAAGTCGCCGATGAGGTCG GTATTCCGTTGGTTTATTTCCGTACAATTGGAGCAAGCTGTTTCTGGGTTTATTTCTGCATTCCTGACATCATTGAAGCAGGGGAGCTTCCGATTCGAGT TGAAGAAGAAGAGGATATGGAGAGGGTGATAACAAAAGTACCAGGAGCAGAGGGGTTTCTGAGGTGCAGAGATCTTCCGAGCTTGTGCCGCGTGGGAGAC CTCTCGGATCCGTTCCTTCAAGCTATAGTATCAACTACCAGAAAGTCCCCAAAAGCTTACGCCCTTATCCTCAACACCTTCGAGGACTTGGAAGGTCCAA TACTCGGCAGAATCAGAACTCGTTGCCCGAAAACTTACCCGATCGGACCCATCCACGAGCAGTTAAGATTAAAGCTTGTCAACCTCAAAACTCCTCAAGA ATCATCATCATCATCATCGTCAAGTCTGTGGGAAGAAGACAGAAGCTGTATGAAGTGGCTAGACTTGCAGCCACCCAAATCTGTACTCTATGTGAACTTC GGCAGCATAACGGTGATGAAGCCAGAGGAACTGGTGGAAATCTGGCACGGTCTAATCAACAGCAAACAAAAGTTCTTGTGGGTACTAAGACAAGGTACAA TCACTACTAGCAAATTTCCAGAGGAGCTTGTGAAAGGGGGTAGTAAGGGAGATGAGTTCATGGTGTTGTCAGGATGGGTGGCGCAGAAGGAAGTGCTGGA TCATGAATCAATTGGTGGGTTTCTGACGCACAGTGGGTGGAACTCGACGTTGGAGACGATAGTGGCTGGAGTGCCGATGATTTGCTTGCCTTATTTCGCT GACCAGCAAGTGAACAGCAGGTTTACGAGTGAGGTGTGGAAGCTGGGGCTGGACATGAAGGATTCGTGCGAGAGAGGTGTGGTGGAGAGGATGGTGAATG AACTAATGGTGGAGAGGAAGGAAGAGTTTGGGAGACGTGCTGCTAAGATGGCCGAGTTGGCCGGAATGAGTGTGAGTTCGGATGGATGTTCTAGTCGGAA TCTGGAGGATTTGATTGAGGAGATCAGGTCAATGAGGTCTAGCTAG
AA sequence Show only first row Show all	>Lus10014831 pacid=23150181 polypeptide=Lus10014831 locus=Lus10014831.g ID=Lus10014831.BGIv1.0 annot-version=v1.0 MEHSGRPPPHVLIFPYPLQGHVTSMLNLAEVLCLSNIRVTFLNSDHIQRRLLQFTSVQSRFAKYPNLFHFQTISDGLPPDHSRSGKDVLDLFLSMSSITR PLFKELLISNQPPIDCVISDGGLEFTVEVADEVGIPLVYFRTIGASCFWVYFCIPDIIEAGELPIRVEEEEDMERVITKVPGAEGFLRCRDLPSLCRVGD LSDPFLQAIVSTTRKSPKAYALILNTFEDLEGPILGRIRTRCPKTYPIGPIHEQLRLKLVNLKTPQESSSSSSSSLWEEDRSCMKWLDLQPPKSVLYVNF GSITVMKPEELVEIWHGLINSKQKFLWVLRQGTITTSKFPEELVKGGSKGDEFMVLSGWVAQKEVLDHESIGGFLTHSGWNSTLETIVAGVPMICLPYFA DQQVNSRFTSEVWKLGLDMKDSCERGVVERMVNELMVERKEEFGRRAAKMAELAGMSVSSDGCSSRNLEDLIEEIRSMRSS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G22380		ATUGT85A3	UDP-glucosyl transferase 85A3 ...		Lus10014831 [exp]	0	1
AT1G76690		OPR2, ATOPR2	ARABIDOPSIS 12-OXOPHYTODIENOAT...		Lus10009473 [exp]	1.0	0.9763
AT4G23100		ATECS1, CAD2, G...	ROOT MERISTEMLESS 1, PHYTOALEX...		Lus10002001 [exp]	2.0	0.9439
AT1G47530			MATE efflux family protein (.1...		Lus10002365 [exp]	3.9	0.9405
AT4G15550		IAGLU	indole-3-acetate beta-D-glucos...		Lus10019989 [exp]	4.5	0.9406
AT5G42020		BIP2, BIP	luminal binding protein, Heat ...		Lus10007778 [exp]	4.7	0.9284
AT1G75130		CYP721A1	"cytochrome P450, family 721, ...		Lus10016310 [exp]	5.5	0.9416
AT1G10370		GST30B, ATGSTU1...	GLUTATHIONE S-TRANSFERASE U17,...		Lus10037234 [exp]	5.7	0.9344
AT1G65820			microsomal glutathione s-trans...		Lus10020793 [exp]	6.0	0.9339
AT1G78780			pathogenesis-related family pr...		Lus10018919 [exp]	6.9	0.9145
AT3G47780		ABCA7, ATATH6	A. THALIANA ABC2 HOMOLOG 6, AT...		Lus10023612 [exp]	6.9	0.9232

Compare expression of checked genes

Lus10014831 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.