Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G36530 803 / 0 ENO2, LOS2 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) AT1G74030 595 / 0 ENO1 enolase 1 (.1) AT2G29560 489 / 3e-171 ENOC cytosolic enolase (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10038904 [exp] 895 / 0 AT2G36530 792 / 0.0 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) Lus10002844 [exp] 796 / 0 AT2G36530 800 / 0.0 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) Lus10003374 [exp] 795 / 0 AT2G36530 799 / 0.0 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) Lus10035579 [exp] 764 / 0 AT2G36530 775 / 0.0 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) Lus10008647 [exp] 684 / 0 AT2G36530 687 / 0.0 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) Lus10038963 [exp] 604 / 0 AT1G74030 808 / 0.0 enolase 1 (.1) Lus10027255 [exp] 604 / 0 AT1G74030 799 / 0.0 enolase 1 (.1) Lus10040711 [exp] 479 / 5e-167 AT2G29560 789 / 0.0 cytosolic enolase (.1) Lus10016447 [exp] 433 / 2e-148 AT2G29560 713 / 0.0 cytosolic enolase (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.015G131100 [exp] 850 / 0 AT2G36530 811 / 0.0 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) Potri.006G116800 [exp] 809 / 0 AT2G36530 814 / 0.0 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) Potri.012G057500 [exp] 588 / 0 AT1G74030 810 / 0.0 enolase 1 (.1) Potri.009G040700 [exp] 511 / 4e-180 AT2G29560 809 / 0.0 cytosolic enolase (.1) Potri.012G129300 [exp] 278 / 1e-92 AT2G36530 260 / 1e-85 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0227 [flax] [poplar] Enolase_N PF03952 [flax] [poplar] Enolase_N Enolase, N-terminal domain CL0256 [flax] [poplar] Enolase_TIM PF00113 [flax] [poplar] Enolase_C Enolase, C-terminal TIM barrel domain
Representative CDS sequence Show only first row Show all	>Lus10015028 pacid=23152840 polypeptide=Lus10015028 locus=Lus10015028.g ID=Lus10015028.BGIv1.0 annot-version=v1.0 ATGGCGACGATCAAGGTTATCAAAGCTAGGCAGATATTCGACAGCCGTGGCAATCCAACTGTTGAGGTTGATGTTACACTGACCGACGGGACATTTGCCA GGGCCGCCGTGCCGAGCGGAGCTTCAACTGGTGTGTATGAGGCTCTGGAGTTGAGGGATGGAGGATCTGATTATCTCGGGAAGGGTGTGCTTAAGGCTGT GGATAATGTGAACTCCATCATTGCGCCTGCTTTGATTGGCAAGGATCCGACCAAACAAACTGAGCTCGACAACTTCATGGTGCAACATCTTGACGGAACC TCCAATGAGTGGGGTTGGTGCAAGCAGAAGCTTGGAGCGAATGCTATTTTGGCTGTTTCACTTGCTATCTGTAAAGCTGGTGCTATTGTCAACAAAATCC CTCTCTATCAGCACATTGCAAATCTTGCTGGCAATAAGAACTTGGTCTTGCCGGTCCCTGCATTCAATGTCATCAATGGAGGTTCCCATGCCGGCAATAA GCTGGCGATGCAGGAATTCATGATTCTCCCAACTGGGGCAGAGTCTTTCAAGGAAGCCATGAAGATGGGAGTTGAAGTCTATCATCACTTGAAGGCTGTG ATCAAGAAGAAGTATGGTCAAGATGCCACCAATGTAGGTGATGAAGGTGGATTTGCTCCTAATATTCAGGAAAACAAAGAGGGACTTGAACTGCTGAAAA CCGCCATAGCCAAAGCTGGATATACTGGCAAGGTTGTGATTGGTATGGACGTTGCTGCTTCTGAGTTCTATGACGGCAAAGACAAAAGCTACGACCTGAA TTTCAAGGAAGAGAACAATGATGGATCCCAGAAGATCTCAGGAGACAGTCTGAAGAACGTTTACAAGTCATTTGTGTCTGATTATCCAATTGTATCCATC GAAGACCCCTTTGATCAGGATGACTGGGAGCACTACGCTAAGTTAACTTCTGAGATCGGTGAGAATGTGCAGATTGTTGGTGATGACCTCCTCGTCACAA ACCCCACGCGTGTCTCAAAAGCTATCAATGAAAAGAGTTGCAACGCCCTTCTGCTCAAGGTGAACCAAATCGGTTCAGTAACCGAAAGCATTGAAGCTGT GAAGATGTCAAAACGCGCTGGCTGGGGTGTCATGGCAAGCCACAGAAGTGGCGAAACCGAGGACACTTTCATCGCTGACCTTTCAGTCGGACTCTCCACT GGACAGATCAAAACCGGAGCTCCTTGCAGGTCTGAAAGGCTTGCTAAATACAATCAGCTGCTGAGGATAGAGGAAGAGCTCGGATCGGCTGCAGTGTACG CTGGATTGAAGTTCCGAGCACCTGTCGAGCCATACTGA
AA sequence Show only first row Show all	>Lus10015028 pacid=23152840 polypeptide=Lus10015028 locus=Lus10015028.g ID=Lus10015028.BGIv1.0 annot-version=v1.0 MATIKVIKARQIFDSRGNPTVEVDVTLTDGTFARAAVPSGASTGVYEALELRDGGSDYLGKGVLKAVDNVNSIIAPALIGKDPTKQTELDNFMVQHLDGT SNEWGWCKQKLGANAILAVSLAICKAGAIVNKIPLYQHIANLAGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPTGAESFKEAMKMGVEVYHHLKAV IKKKYGQDATNVGDEGGFAPNIQENKEGLELLKTAIAKAGYTGKVVIGMDVAASEFYDGKDKSYDLNFKEENNDGSQKISGDSLKNVYKSFVSDYPIVSI EDPFDQDDWEHYAKLTSEIGENVQIVGDDLLVTNPTRVSKAINEKSCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLST GQIKTGAPCRSERLAKYNQLLRIEEELGSAAVYAGLKFRAPVEPY

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G36530		ENO2, LOS2	LOW EXPRESSION OF OSMOTICALLY ...		Lus10015028 [exp]	0	1
AT5G62750			unknown protein		Lus10042178 [exp]	1.0	0.9818
AT3G10920		MSD1, MEE33, AT...	MATERNAL EFFECT EMBRYO ARREST ...		Lus10030534 [exp]	3.7	0.9810
AT1G72360	AP2_ERF	AtERF73, HRE1	HYPOXIA RESPONSIVE ERF \(ETHYL...		Lus10008214 [exp]	6.0	0.9805
AT2G36530		ENO2, LOS2	LOW EXPRESSION OF OSMOTICALLY ...		Lus10038904 [exp]	6.6	0.9800
AT3G50390			Transducin/WD40 repeat-like su...		Lus10016779 [exp]	8.4	0.9729
AT5G25940			early nodulin-related (.1)		Lus10030052 [exp]	8.8	0.9725
AT2G03800		GEK1	GEKO1, D-aminoacyl-tRNA deacyl...		Lus10036828 [exp]	9.3	0.9454
AT5G59350			unknown protein		Lus10004955 [exp]	9.9	0.9724
					Lus10002596 [exp]	12.0	0.9716
AT2G18670			RING/U-box superfamily protein...		Lus10019979 [exp]	12.0	0.9689

Compare expression of checked genes

Lus10015028 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.