Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G15190 70 / 7e-14 Fasciclin-like arabinogalactan family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10023183 [exp] 310 / 4e-107 AT1G15190 67 / 3e-13 Fasciclin-like arabinogalactan family protein (.1) Lus10023801 [exp] 125 / 3e-33 AT1G15190 125 / 1e-33 Fasciclin-like arabinogalactan family protein (.1) Lus10003958 [exp] 120 / 2e-31 AT1G15190 129 / 1e-34 Fasciclin-like arabinogalactan family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G306800 [exp] 56 / 5e-09 AT1G15190 52 / 8e-08 Fasciclin-like arabinogalactan family protein (.1) Potri.019G002300 [exp] 45 / 3e-05 AT1G15190 93 / 3e-22 Fasciclin-like arabinogalactan family protein (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10015081 pacid=23171540 polypeptide=Lus10015081 locus=Lus10015081.g ID=Lus10015081.BGIv1.0 annot-version=v1.0 ATGAACTCCTCCTCCTCCAAGCAACTGTTTCTTGATCTTCCAATCGTCTTCCTCCTCCGCACCCCCCCCGCCGGCTTCTTTTTCTCAAATCAGAAGCCAG TGGAAGCCATCACCACCGAAGCTCTCGACTACATCCTCTACCTGCTCAGAAGCCGCGGCCATTCCCTGTTCTCAAATGGAATCTCAACATCCGACCTCCT CTTTGACGTCCTCTCCCTTCCTTCCCTCACTCTCTTTCCTCCTCCCGATTCCGCCCTCTTCGGACTCGATCTGACGGCCAAATCCCCGGCGTTTTACCTG GCCACCCTCCGCCTCCACGTCGTCCCTTTCCGCATCACCGATTTCCGCAACAACGCATCTCTGCACACTCTTGTCCATTCCCGCCGCCGCCTTCACGTCG CCCAAAACAACAACGGCGTCGTTTTTGTTGACGGGGTGGAGGTCGTCTTCCCGCCTCTCTACTACCAGAGCAATGTCGCTGTCTATGCGCTACGAGGTTT GCTTCCTCCTGACCGACTGGCCTCTGTTTCACCTCCTCCGTTTCAGTGGTTTCGACCTAGAATTCCGAGCACCGACGGATCGTATTTCCAATCTCCGGCA TCCAAGCATAAGCTGGTTCCAGCGTTTCCTCCGGTGATGTGGAGCAATGTTTCTTTGCCACCGGCGGAAGTGGAATCCAACAAGCCAAGAAGAGTTGTCC CTCCGACGACAGCAAAAAGTGTAAAGGAATCAGGGGAAGAGGAGACGGACTATCCGGAAGAGAAGGATGGGGATGAGGAAAGCTACAGTGAGGATTACGC AATGCAGCAGAGCCACAGGGATTGA
AA sequence Show only first row Show all	>Lus10015081 pacid=23171540 polypeptide=Lus10015081 locus=Lus10015081.g ID=Lus10015081.BGIv1.0 annot-version=v1.0 MNSSSSKQLFLDLPIVFLLRTPPAGFFFSNQKPVEAITTEALDYILYLLRSRGHSLFSNGISTSDLLFDVLSLPSLTLFPPPDSALFGLDLTAKSPAFYL ATLRLHVVPFRITDFRNNASLHTLVHSRRRLHVAQNNNGVVFVDGVEVVFPPLYYQSNVAVYALRGLLPPDRLASVSPPPFQWFRPRIPSTDGSYFQSPA SKHKLVPAFPPVMWSNVSLPPAEVESNKPRRVVPPTTAKSVKESGEEETDYPEEKDGDEESYSEDYAMQQSHRD

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G15190			Fasciclin-like arabinogalactan...		Lus10015081 [exp]	0	1
AT2G32600			hydroxyproline-rich glycoprote...		Lus10021506 [exp]	2.6	0.8632
AT4G04860		DER2.2	DERLIN-2.2 (.1)		Lus10018347 [exp]	3.7	0.8254
AT2G45590			Protein kinase superfamily pro...		Lus10036534 [exp]	4.9	0.8280
AT3G13060		ECT5	evolutionarily conserved C-ter...		Lus10015778 [exp]	8.5	0.8451
AT3G10490	NAC	ANAC051, ANAC05...	Arabidopsis NAC domain contain...		Lus10037939 [exp]	11.2	0.8205
AT5G62640		AtELF5, ELF5	EARLY FLOWERING 5, proline-ric...		Lus10042169 [exp]	14.1	0.8079
AT1G16520			unknown protein		Lus10031771 [exp]	18.4	0.7804
AT1G15190			Fasciclin-like arabinogalactan...		Lus10023183 [exp]	20.0	0.8519
AT4G02590	bHLH	bHLH059, UNE12	unfertilized embryo sac 12, ba...		Lus10018761 [exp]	23.0	0.7925
AT1G48480		RKL1	receptor-like kinase 1 (.1)		Lus10017996 [exp]	23.6	0.8291

Compare expression of checked genes

Lus10015081 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.