Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10015131 pacid=23149579 polypeptide=Lus10015131 locus=Lus10015131.g ID=Lus10015131.BGIv1.0 annot-version=v1.0 ATGGCCGGAGTACTAGTAATCAGTTCGAAATGGGTGTCTTTGTTTTTGGTTTTGGCGTGCGTTGTGCTTCAACTGAGTGCCGACATTGTGTTCGCCGACG AGGTGGCGAGGTACGGTGACGACTGCCGCTGGAGCCGCCGTGGTTGCGGTGGTCGTTATGGTCGTGGACCTTGGGGACGTCCTGGCCGGGGTCGAGGCGG TGGGTTTGGAGGCGGTGGTGGGCTAGGTGGAGGTGCTGGAGGTGGTGGGGGTTTGGGAGGTGGAGCCGGAGGTGGTGGAGGGTTGGGAGGAGGCGCTGGA GGTGGTGGCGGTTTAGGTGGTGGAGCTGGAGGCGGTGGAGGGTTGGGTGGAGGTGCTGGAGGTGGTGGCGGTTTGGGAGGTGGAGGTGGTGGCGGTTTGG GAGGGGGTGCTGGAGGTGGTGGCGGTTTGGGAGGTGGAGGTGGTGGCGGTTTGGGAGGGGGTGCTGGAGGTGGTGGCGGTTTGGGAGGTGGAGGTGGTGG CGGTTTGGGAGGGGGTGCTGGAGGTGGTGGCGGTTTGGGAGGTGGAGGTGGTGGCGGTTTGGGAGGGGGTGCTGGAGGTGGTGGCGGTTTGGGAGGTGGA GGTGGTGGCGGTTTGGGAGGGGGTGCTGGAGGTGGTGGCGGTTTGGGAGGTGGAGGTGGTGGCGGTTTGGGAGGGGGTGCTGGAGGTGGTGGCGGTTTGG GAGGTGGAGGTGGTGGCGGTTTGGGAGGGGGTGCTGGAGGTGGTGGCGGTTTGGGAGGTGGAGGTGGTGGCGGTTTGGGAGGGGGTGCTGGAGGTGGTGG CGGTTTGGGAGGTGGAGGTGGTGGCGGTTTGGGAGGGGGTGCTGGAGGTGGTGGCGGTTTGGGAGGTGGAGGTGGTGGCGGTTTGGGAGGGGGTGCTGGA GGTGGTGGCGGTTTGGGAGGTGGAGGTGGTGGCGGTTTGGGAGGGGGTGCTGGAGGTGGTGGCGGTTTGGGAGGTGGAGGTGGTGGCGGTTTGGGAGGGG GTGCTGGAGGTGGTGGCGGTTTGGGAGGTGGAGGTGGTGGCGGTTTGGGAGGGGGTGCTGGAGGTGGTGGCGGTTTGGGAGGTGGAGGTGGTGGCGGTTT GGGAGGGGGTGCTGGAGGTGGTGGCGGTTTGGGAGGTGGAGGTGGTGGCGGTTTGGGAGGGGGTGCTGGAGGTGGTGGCGGTTTGGGAGGTGGAGGTGGT GGCGGTTTGGGAGGGGGTGCTGGAGGTGGTGGCGGTTTGGGAGGTGGAGGTGGTGGCGGTTTGGGAGGGGGTGCTGGAGGTGGTGGCGGTTTGGGAGGTG GAGGTGGTGGCGGTTTTGAAACCTTTGTTGAGTTAAACGTTAGATTTGAATTCTTAAGCTTGTAA
AA sequence Show only first row Show all	>Lus10015131 pacid=23149579 polypeptide=Lus10015131 locus=Lus10015131.g ID=Lus10015131.BGIv1.0 annot-version=v1.0 MAGVLVISSKWVSLFLVLACVVLQLSADIVFADEVARYGDDCRWSRRGCGGRYGRGPWGRPGRGRGGGFGGGGGLGGGAGGGGGLGGGAGGGGGLGGGAG GGGGLGGGAGGGGGLGGGAGGGGGLGGGGGGGLGGGAGGGGGLGGGGGGGLGGGAGGGGGLGGGGGGGLGGGAGGGGGLGGGGGGGLGGGAGGGGGLGGG GGGGLGGGAGGGGGLGGGGGGGLGGGAGGGGGLGGGGGGGLGGGAGGGGGLGGGGGGGLGGGAGGGGGLGGGGGGGLGGGAGGGGGLGGGGGGGLGGGAG GGGGLGGGGGGGLGGGAGGGGGLGGGGGGGLGGGAGGGGGLGGGGGGGLGGGAGGGGGLGGGGGGGLGGGAGGGGGLGGGGGGGLGGGAGGGGGLGGGGG GGLGGGAGGGGGLGGGGGGGLGGGAGGGGGLGGGGGGGFETFVELNVRFEFLSL

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10015131 [exp]	0	1
AT5G02540			NAD(P)-binding Rossmann-fold s...		Lus10025321 [exp]	1.4	0.9630
					Lus10004133 [exp]	2.0	0.8835
AT2G36110			Polynucleotidyl transferase, r...		Lus10043049 [exp]	2.0	0.9621
AT5G45950			GDSL-like Lipase/Acylhydrolase...		Lus10005279 [exp]	4.2	0.9145
AT1G11600		CYP77B1	"cytochrome P450, family 77, s...		Lus10018351 [exp]	5.5	0.8818
					Lus10034269 [exp]	6.7	0.8118
AT1G78960		ATLUP2	lupeol synthase 2 (.1)		Lus10033355 [exp]	8.1	0.8810
AT5G55150			Protein of unknown function (D...		Lus10007081 [exp]	9.8	0.7770
AT4G23060		IQD22	IQ-domain 22 (.1)		Lus10024498 [exp]	11.0	0.8035
AT1G74670		GASA6	GA-stimulated Arabidopsis 6, G...		Lus10042203 [exp]	11.3	0.8302

Compare expression of checked genes

Lus10015131 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.