Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G42570 225 / 6e-75 B-cell receptor-associated 31-like (.1) AT1G11905 169 / 9e-53 B-cell receptor-associated protein 31-like (.1.2) AT5G48660 114 / 2e-31 B-cell receptor-associated protein 31-like (.1) AT3G07190 103 / 3e-27 B-cell receptor-associated protein 31-like (.1) AT3G20450 100 / 8e-27 B-cell receptor-associated protein 31-like (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10031546 [exp] 323 / 2e-113 AT5G42570 287 / 3e-99 B-cell receptor-associated 31-like (.1) Lus10030043 [exp] 221 / 2e-73 AT5G42570 241 / 1e-81 B-cell receptor-associated 31-like (.1) Lus10035283 [exp] 196 / 1e-63 AT5G42570 244 / 9e-83 B-cell receptor-associated 31-like (.1) Lus10020025 [exp] 174 / 9e-55 AT1G11905 225 / 9e-75 B-cell receptor-associated protein 31-like (.1.2) Lus10011842 [exp] 119 / 3e-33 AT5G48660 270 / 1e-92 B-cell receptor-associated protein 31-like (.1) Lus10038188 [exp] 117 / 1e-32 AT3G07190 265 / 1e-90 B-cell receptor-associated protein 31-like (.1) Lus10022777 [exp] 115 / 1e-31 AT5G48660 271 / 9e-93 B-cell receptor-associated protein 31-like (.1) Lus10000048 [exp] 48 / 3e-07 AT1G11905 81 / 3e-20 B-cell receptor-associated protein 31-like (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.011G007200 [exp] 208 / 3e-68 AT5G42570 278 / 1e-95 B-cell receptor-associated 31-like (.1) Potri.004G007900 [exp] 204 / 1e-66 AT5G42570 259 / 3e-88 B-cell receptor-associated 31-like (.1) Potri.014G154800 [exp] 184 / 1e-58 AT5G42570 152 / 2e-46 B-cell receptor-associated 31-like (.1) Potri.014G191500 [exp] 127 / 2e-36 AT5G48660 237 / 2e-79 B-cell receptor-associated protein 31-like (.1) Potri.002G245300 [exp] 127 / 3e-36 AT3G07190 239 / 3e-80 B-cell receptor-associated protein 31-like (.1) Potri.011G089100 [exp] 122 / 2e-35 AT5G42570 140 / 5e-43 B-cell receptor-associated 31-like (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10015132 pacid=23149541 polypeptide=Lus10015132 locus=Lus10015132.g ID=Lus10015132.BGIv1.0 annot-version=v1.0 ATGGCGGTGATTCTGACGCTGCTGTTCAAGACGCCGCTGCGGAAGCTGGTGATCGTGGCGCTGGATCGGGTCAAGCGCGGGAGAGGCCCCGTCATGGTGA AGACCGTCTCCGGGACGGTGTTCGTCGTCCTCTGCTCCAGCCTTTACAGTATGGTCACGATTCAGAATCGCTCCATCGAGGCCGGCTCTCCCAATCCTAC CGATCAGGTTCTCGAGTCCACGCACCTGCTCGAAGCCTCTCTCATGGGTAAAACAGTCTGCCTTAAATCTGCTCACGGGTTTCTGCTTTTTCTCGCGCTG ATGATTGACAGGCTGCACTACTACATCAGGGAGCTCCGCCAGCTAAGGAAGACGATGGAAGCCGTGAAGAAGCAGACTCAAGGTCTCGACGATAGCAAAA GCAGCAGCAGCAACAACCCAGATGAGCTCAAAGCACTAGGAGAAGAGGTTGCTACCCTACGCAGCAAGGTGAAGAAGATGGAAGCCGAATGTGAAGCCAA GACAAAGGAAGCTAAGGCCGCAGCTGAGAAAGCTGGTGCTGTGAGGAAACAAACCGAAGGGTTTATTCAAGACTACGAGCAATTACAAGAAGACAACCAG AACCTCCGTAGCCAGATCGAGTCGTTAGAATCTGAGGGCAAGAAGGATATGTGA
AA sequence Show only first row Show all	>Lus10015132 pacid=23149541 polypeptide=Lus10015132 locus=Lus10015132.g ID=Lus10015132.BGIv1.0 annot-version=v1.0 MAVILTLLFKTPLRKLVIVALDRVKRGRGPVMVKTVSGTVFVVLCSSLYSMVTIQNRSIEAGSPNPTDQVLESTHLLEASLMGKTVCLKSAHGFLLFLAL MIDRLHYYIRELRQLRKTMEAVKKQTQGLDDSKSSSSNNPDELKALGEEVATLRSKVKKMEAECEAKTKEAKAAAEKAGAVRKQTEGFIQDYEQLQEDNQ NLRSQIESLESEGKKDM

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G42570			B-cell receptor-associated 31-...		Lus10015132 [exp]	0	1
AT5G27920			F-box family protein (.1)		Lus10029869 [exp]	84.1	0.7941
AT1G54740			Protein of unknown function (D...		Lus10035353 [exp]	156.9	0.7728
AT3G13780			SMAD/FHA domain-containing pro...		Lus10037628 [exp]	183.0	0.7561
AT5G06060			NAD(P)-binding Rossmann-fold s...		Lus10040732 [exp]	184.4	0.7623
AT5G13070			MSF1-like family protein (.1)		Lus10031261 [exp]	223.9	0.7516
AT1G52600			Peptidase S24/S26A/S26B/S26C f...		Lus10023131 [exp]	279.3	0.7421

Compare expression of checked genes

Lus10015132 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.