Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G15780 77 / 2e-15 unknown protein AT1G15790 55 / 6e-09 unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10025452 [exp] 84 / 1e-17 AT1G15780 248 / 3e-68 unknown protein Lus10015323 [exp] 83 / 1e-17 AT1G15780 587 / 0.0 unknown protein Lus10015322 [exp] 71 / 1e-13 AT1G15780 164 / 1e-41 unknown protein Lus10023978 [exp] 52 / 3e-08 AT1G15780 71 / 4e-15 unknown protein Lus10025448 [exp] 52 / 6e-08 AT1G15780 80 / 9e-18 unknown protein
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.003G025200 [exp] 82 / 1e-19 AT1G15780 139 / 2e-39 unknown protein Potri.003G012400 [exp] 83 / 1e-17 AT1G15780 557 / 2e-175 unknown protein Potri.003G028089 [exp] 83 / 1e-17 AT1G15780 223 / 5e-60 unknown protein Potri.001G204900 [exp] 83 / 1e-17 AT1G15780 575 / 0.0 unknown protein Potri.003G026510 [exp] 77 / 2e-17 AT1G15780 160 / 2e-46 unknown protein Potri.003G014156 [exp] 71 / 1e-15 AT1G15780 110 / 4e-30 unknown protein Potri.003G028245 [exp] 71 / 1e-15 AT1G15780 110 / 4e-30 unknown protein Potri.006G031200 [exp] 45 / 5e-05 AT1G15780 242 / 1e-65 unknown protein Potri.016G028200 [exp] 42 / 0.0006 AT1G15780 252 / 4e-69 unknown protein
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10015321 pacid=23178756 polypeptide=Lus10015321 locus=Lus10015321.g ID=Lus10015321.BGIv1.0 annot-version=v1.0 ATGAATACTTCGACGCCTGCTGTGAAGCCGACTGACTGGAGAGCGACGATGACGCCCAACACGAGAGAAGGAATCGTGAACAAAGTAATGGAATCAATGA AGAAGAGTTTACCTTTTACTGGTGAAGAGGATGTGAAAGATCTAAAGAACATTGCTGAACGATTTGAGGAAAAGATTTACACTGCTGCCACTAGTCAGGC ATCCTCGGTCGAACAGTCAACGCGATCCGTACTTGAGGAACAACAGAGGATGATCAACCAGATGATTGCTAAGCATAGAAAACAACTGGATTCTCTTTCG GATCTGCAGAAGCAAACACAACAGCAGTTGCTCGAAACGCAGTCGTTTGGTAACAACATTAACTCGAGCATTATGCAGCAGCAACAGTCTATGATTGGTT TCTGTCCACAAAGTTCATTGCCGTCATCCCAAGGACGACATTTTGTGCCGCAACAGCTTGCTCCTGTCCAACCAATGTTTGATATAGATTCGAAGGTACA AACTAGCCAGACAAATGGAATGGATTGGCAAGAGGAAGTCCTTCAAAAGAAGGGATGGTTTTGTTGTCCAGTCTATCTTCAAGGTTATCATCTGATGTCC AAGCAGCCAAGTCAGACGGAGATTTTCAATAGCCCCTCTGAATTCTGCACGAATAATGAAACAACTTTCGAGATTGATGACTTACGTCCTCCAGATGCTG CTAGTCGGAACAAAGGCAAGAAGGAACTTTCAGAATTAACTGTAACCCAACCATGTGGTGTCGGTCTCCATCTAACGTTCATATCTCGACCTGACGCTAA GTTCCCCAATCCAAAACTCAGCGTGACATTAGTAGTATTATACTCCAGGCAAAGGTCCTAG
AA sequence Show only first row Show all	>Lus10015321 pacid=23178756 polypeptide=Lus10015321 locus=Lus10015321.g ID=Lus10015321.BGIv1.0 annot-version=v1.0 MNTSTPAVKPTDWRATMTPNTREGIVNKVMESMKKSLPFTGEEDVKDLKNIAERFEEKIYTAATSQASSVEQSTRSVLEEQQRMINQMIAKHRKQLDSLS DLQKQTQQQLLETQSFGNNINSSIMQQQQSMIGFCPQSSLPSSQGRHFVPQQLAPVQPMFDIDSKVQTSQTNGMDWQEEVLQKKGWFCCPVYLQGYHLMS KQPSQTEIFNSPSEFCTNNETTFEIDDLRPPDAASRNKGKKELSELTVTQPCGVGLHLTFISRPDAKFPNPKLSVTLVVLYSRQRS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G15780			unknown protein		Lus10015321 [exp]	0	1
AT4G09960	MADS	AGL11, STK	SEEDSTICK, AGAMOUS-like 11, K-...		Lus10008264 [exp]	3.2	0.9005
AT5G42785			unknown protein		Lus10002541 [exp]	5.3	0.9087
AT3G29635			HXXXD-type acyl-transferase fa...		Lus10021388 [exp]	6.2	0.8879
AT1G27040			Major facilitator superfamily ...		Lus10006477 [exp]	6.8	0.9156
					Lus10014856 [exp]	12.0	0.8237
AT4G37980		ELI3-1, ATCAD7	CINNAMYL-ALCOHOL DEHYDROGENASE...		Lus10023268 [exp]	16.3	0.9065
AT2G36800		UGT73C5, DOGT1	UDP-GLUCOSYL TRANSFERASE 73C5,...		Lus10022627 [exp]	18.7	0.8510
AT4G23430		AtTic32-IVa	translocon at the inner envelo...		Lus10024685 [exp]	18.8	0.9012
AT1G19630		CYP722A1	"cytochrome P450, family 722, ...		Lus10014285 [exp]	19.8	0.8878
AT5G15630		IRX6, COBL4	IRREGULAR XYLEM 6, COBRA-LIKE4...		Lus10034666 [exp]	19.9	0.8651

Compare expression of checked genes

Lus10015321 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.