Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G11000 192 / 8e-58 ATMLO4, MLO4 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) AT5G53760 89 / 2e-20 ATMLO11, MLO11 MILDEW RESISTANCE LOCUS O 11, Seven transmembrane MLO family protein (.1.2) AT1G26700 86 / 4e-19 ATMLO14, MLO14 MILDEW RESISTANCE LOCUS O 14, Seven transmembrane MLO family protein (.1) AT4G02600 76 / 8e-16 MLO1, ATMLO1 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2) AT4G24250 71 / 2e-14 ATMLO13, MLO13 MILDEW RESISTANCE LOCUS O 13, Seven transmembrane MLO family protein (.1) AT2G39200 71 / 3e-14 ATMLO12, MLO12 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) AT1G11310 70 / 8e-14 PMR2, ATMLO2, MLO2 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2) AT1G61560 68 / 3e-13 ATMLO6, MLO6 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) AT2G17480 65 / 5e-12 ATMLO8, MLO8 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) AT2G44110 64 / 1e-11 ATMLO15, MLO15 MILDEW RESISTANCE LOCUS O 15, Seven transmembrane MLO family protein (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10001370 [exp] 360 / 9e-124 AT1G11000 406 / 1e-136 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) Lus10012698 [exp] 219 / 6e-69 AT1G11000 305 / 2e-97 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) Lus10001292 [exp] 113 / 2e-32 AT1G11000 86 / 2e-21 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) Lus10032669 [exp] 97 / 4e-23 AT5G53760 777 / 0.0 MILDEW RESISTANCE LOCUS O 11, Seven transmembrane MLO family protein (.1.2) Lus10043085 [exp] 94 / 4e-22 AT5G53760 776 / 0.0 MILDEW RESISTANCE LOCUS O 11, Seven transmembrane MLO family protein (.1.2) Lus10041893 [exp] 79 / 9e-17 AT1G11000 353 / 1e-114 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) Lus10028440 [exp] 79 / 1e-16 AT1G11000 366 / 9e-120 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) Lus10036519 [exp] 77 / 6e-16 AT1G61560 763 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10001336 [exp] 75 / 2e-15 AT4G02600 644 / 0.0 MILDEW RESISTANCE LOCUS O 1, Seven transmembrane MLO family protein (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.004G218500 [exp] 207 / 8e-64 AT1G11000 735 / 0.0 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) Potri.001G402400 [exp] 98 / 2e-23 AT5G53760 828 / 0.0 MILDEW RESISTANCE LOCUS O 11, Seven transmembrane MLO family protein (.1.2) Potri.005G111400 [exp] 97 / 4e-23 AT1G11000 434 / 8e-147 MILDEW RESISTANCE LOCUS O 4, Seven transmembrane MLO family protein (.1) Potri.011G121600 [exp] 86 / 3e-19 AT5G53760 723 / 0.0 MILDEW RESISTANCE LOCUS O 11, Seven transmembrane MLO family protein (.1.2) Potri.008G041400 [exp] 73 / 8e-15 AT1G61560 768 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.011G059200 [exp] 72 / 1e-14 AT2G39200 424 / 2e-143 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Potri.004G050000 [exp] 70 / 9e-14 AT2G39200 490 / 4e-170 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Potri.009G011900 [exp] 70 / 9e-14 AT1G61560 603 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.001G078800 [exp] 69 / 2e-13 AT4G24250 549 / 0.0 MILDEW RESISTANCE LOCUS O 13, Seven transmembrane MLO family protein (.1) Potri.007G064300 [exp] 67 / 7e-13 AT2G17480 669 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF03094 [flax] [poplar] Mlo Mlo family
Representative CDS sequence Show only first row Show all	>Lus10015461 pacid=23173612 polypeptide=Lus10015461 locus=Lus10015461.g ID=Lus10015461.BGIv1.0 annot-version=v1.0 ATGGTGGTCGGGACCAAGCTCCAGCATGTCGTGTCCATGCTAGCTCTTGGAATCGTCGAACAATCAGGGCCACCTGTCGGAACTCAAGTCAAGCCTCGAG ATGATTTGTTTTGGTTTGGTAAACCGGAAATTCTTGTGAGGTTGATTCAGTTCATAATCTTTCAGAATGCATTTGAAATGGCAACATTCATCTGGTCCTT GATGGGTTCAAAGTGCAGGAAAGCACTAGTTGCTGAGAGTGTGAGAGATTCACTCCACAGCTGGTGTAAGAGAGTGAAGGAGAGGTCAAAGCACGATGCT GCACTGTCGATAGCCACGAGATCAGTGTGTTCGCTCGACACAGCCATGATCGACGAAGGGGATGAGGAGGAGGTGAACACGGTTGCATCAGGAGGAACCA TCTCCAGGTCCTCATCCATGAACTCCCTTCATGAGATAACAACAGTAGAGGCTGCTGCTGAGGGAGACAGGGATCGTGGCGATTCAAACAATGGCCGGCA TCGACAAGATGATGAGCTGTCATTGAGGATAGAAGAGTACTTGAACAACAATGTAGCAGAACTTCATCATGTTAGTGATGATGAAGAAGAAGATGATCAT GCACACGGCAGCAATGATGAAGAAGAGTCCAAAGTTGAGACCTTGCTGGACTTGTTTAATAAAACTTAA
AA sequence Show only first row Show all	>Lus10015461 pacid=23173612 polypeptide=Lus10015461 locus=Lus10015461.g ID=Lus10015461.BGIv1.0 annot-version=v1.0 MVVGTKLQHVVSMLALGIVEQSGPPVGTQVKPRDDLFWFGKPEILVRLIQFIIFQNAFEMATFIWSLMGSKCRKALVAESVRDSLHSWCKRVKERSKHDA ALSIATRSVCSLDTAMIDEGDEEEVNTVASGGTISRSSSMNSLHEITTVEAAAEGDRDRGDSNNGRHRQDDELSLRIEEYLNNNVAELHHVSDDEEEDDH AHGSNDEEESKVETLLDLFNKT

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G11000		ATMLO4, MLO4	MILDEW RESISTANCE LOCUS O 4, S...		Lus10015461 [exp]	0	1
AT5G01930		MAN6, AtMAN6	endo-beta-mannase 6, Glycosyl ...		Lus10014184 [exp]	5.7	0.9528
AT2G03500	GARP		Homeodomain-like superfamily p...		Lus10023857 [exp]	7.1	0.9431
AT5G03260		LAC11	laccase 11 (.1)		Lus10002227 [exp]	9.9	0.9482
AT4G16480		ATINT4	inositol transporter 4 (.1)		Lus10010500 [exp]	10.6	0.8612
AT2G44480		BGLU17	beta glucosidase 17 (.1.2)		Lus10039541 [exp]	11.0	0.9404
AT2G45720			ARM repeat superfamily protein...		Lus10016848 [exp]	11.3	0.8928
AT4G34180			Cyclase family protein (.1)		Lus10001509 [exp]	11.7	0.9404
AT4G34180			Cyclase family protein (.1)		Lus10031453 [exp]	12.1	0.9403
AT5G03260		LAC11	laccase 11 (.1)		Lus10023189 [exp]	13.7	0.9414
AT1G66240		ATX1, ATATX1	homolog of anti-oxidant 1 (.1....		Lus10034138 [exp]	18.3	0.8886

Compare expression of checked genes

Lus10015461 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.