Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10037654 [exp] 161 / 2e-52 ND 41 / 2e-05 Lus10023327 [exp] 74 / 1e-17 AT5G02640 79 / 3e-19 unknown protein Lus10038485 [exp] 72 / 1e-16 AT5G02640 73 / 9e-17 unknown protein
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10015636 pacid=23147276 polypeptide=Lus10015636 locus=Lus10015636.g ID=Lus10015636.BGIv1.0 annot-version=v1.0 ATGAACTACGTCGTCGCAGCAGTTCACCTGCCGGTCCGTAGGTTTCCTACGACGACTAGACTCATCGACCAAAGAGAGCCTCTGGTTGGAGAGTCTGGCC GAAAGTTTGCAAGCTTCGAGGAGCGTAGCTACAAGCAGTTGTACCTCAGGAGCTACACCTTTCGTAGGAAGGAGACGTTTCGAGGGAAGGCGAAGCGGGG TATTCGGAATGTCTTCGAAGGATTAAAGAGGAGGAGATTAACTACGACAGCGGCTGCGGAGAAGAGGAGGAAGAAGAAGATGATATGTTTGAGGAAGGCA AGGAAGGTGATGTATGCAGCGTTGCTTAGGATTTTGAGGAGATTGATGATGAATTGTACCTCAAGGGTTGACACGGTGTCGTAA
AA sequence Show only first row Show all	>Lus10015636 pacid=23147276 polypeptide=Lus10015636 locus=Lus10015636.g ID=Lus10015636.BGIv1.0 annot-version=v1.0 MNYVVAAVHLPVRRFPTTTRLIDQREPLVGESGRKFASFEERSYKQLYLRSYTFRRKETFRGKAKRGIRNVFEGLKRRRLTTTAAAEKRRKKKMICLRKA RKVMYAALLRILRRLMMNCTSRVDTVS

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10015636 [exp]	0	1
AT4G02340			alpha/beta-Hydrolases superfam...		Lus10008682 [exp]	4.1	0.8897
AT1G14600	GARP		Homeodomain-like superfamily p...		Lus10029808 [exp]	5.5	0.7850
AT2G40190		LEW3	LEAF WILTING 3, UDP-Glycosyltr...		Lus10007909 [exp]	7.2	0.8381
AT1G65450			HXXXD-type acyl-transferase fa...		Lus10029920 [exp]	9.9	0.8104
AT5G11730			Core-2/I-branching beta-1,6-N-...		Lus10034348 [exp]	11.5	0.8104
AT5G37060		ATCHX24	cation/H+ exchanger 24, ARABID...		Lus10031852 [exp]	13.2	0.8004
AT4G00350			MATE efflux family protein (.1...		Lus10036374 [exp]	13.4	0.7970
AT2G06090			Plant self-incompatibility pro...		Lus10023196 [exp]	13.7	0.6961
AT5G45670			GDSL-like Lipase/Acylhydrolase...		Lus10011999 [exp]	15.2	0.7967
					Lus10011637 [exp]	16.5	0.7922

Compare expression of checked genes

Lus10015636 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.