Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G17450 206 / 5e-60 B-block binding subunit of TFIIIC (.1.2) AT1G59077 201 / 7e-60 unknown protein AT1G58766 201 / 7e-60 unknown protein AT1G59453 200 / 3e-58 B-block binding subunit of TFIIIC (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10037675 [exp] 539 / 3e-178 AT1G17450 1340 / 0.0 B-block binding subunit of TFIIIC (.1.2) Lus10000369 [exp] 366 / 7e-126 AT1G17450 294 / 2e-88 B-block binding subunit of TFIIIC (.1.2) Lus10022088 [exp] 278 / 9e-95 AT1G17450 205 / 6e-61 B-block binding subunit of TFIIIC (.1.2) Lus10022089 [exp] 61 / 3e-10 AT1G59077 210 / 1e-62 unknown protein
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.003G064000 [exp] 259 / 1e-78 AT1G17450 1446 / 0.0 B-block binding subunit of TFIIIC (.1.2)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10015660 pacid=23147233 polypeptide=Lus10015660 locus=Lus10015660.g ID=Lus10015660.BGIv1.0 annot-version=v1.0 ATGTTGGGAGAAACCTTACGGCATTATTCCGAACATGATATTTTTGCTGCCTTCAGCTATCTCAGGGAGAACAAAATATTGATTGGGAGCAGCGGTGGTC CTTTTGTTCTGTCTCAACAGTTTTTGCACAACATTTCTAGATCTCATTTTCCCACCAATACTGGAAAAAGAGCAGCTAGATTTTCTAATTGGCTTCATAA AGGAAATAACTTCGGCGCAGGAGGTAGCATTGATTTGAAAGAAGATCTGCATTGCGGGGACATTTTTCAGCCGTTTGCTCTAGTTTCTTCAGGTGAAATG TCTGTGTCTCTATGCTTACCTGGTGAGGGTCTAGGAATGGCTGATGACCAGAGAAGCTCCAAAAGGAAACCCGAGGATGATGGATTTTGTGATAGGGGCA AGGCTAAGAAATTAAAACCGATTGCAGACAGTGAAACCTGTTCTCGGCGCGAAAAAGGCTTCCCTGGCATACGAGTGTCAATCTGCTGTGCAACAATCTT GCCCGTCAATGCTCTTGATTCTCTCAATGATGGTGAAAATGGTATTGATATATCTCAGAAGGATAAAGTAGACAATGGTTTTCCCGATTTCGACAGCATT ACTCCTTCAGCAAGAATATCGAGTCAATCCTCTTGGGAAACCATGGCAGACTATGCGAACTATCTCCATGAAAATGCTTCTGGCCTAACAGAAGGAAGTT CCTTCAGTTCTGAGGTCTTCAGGGCTACTTACACGGCAATTCATAAAGCTGGTGATCAAGGCTTGGGCATTGAGGAAGTTTCATACTCTCTAAACATGGC AGGTGTGTATACTCTATTTTCTTGA
AA sequence Show only first row Show all	>Lus10015660 pacid=23147233 polypeptide=Lus10015660 locus=Lus10015660.g ID=Lus10015660.BGIv1.0 annot-version=v1.0 MLGETLRHYSEHDIFAAFSYLRENKILIGSSGGPFVLSQQFLHNISRSHFPTNTGKRAARFSNWLHKGNNFGAGGSIDLKEDLHCGDIFQPFALVSSGEM SVSLCLPGEGLGMADDQRSSKRKPEDDGFCDRGKAKKLKPIADSETCSRREKGFPGIRVSICCATILPVNALDSLNDGENGIDISQKDKVDNGFPDFDSI TPSARISSQSSWETMADYANYLHENASGLTEGSSFSSEVFRATYTAIHKAGDQGLGIEEVSYSLNMAGVYTLFS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G17450			B-block binding subunit of TFI...		Lus10015660 [exp]	0	1
AT1G17450			B-block binding subunit of TFI...		Lus10015659 [exp]	1.0	0.8832
AT2G37520			Acyl-CoA N-acyltransferase wit...		Lus10025315 [exp]	3.7	0.8634
AT1G17450			B-block binding subunit of TFI...		Lus10015661 [exp]	3.9	0.8460
					Lus10039535 [exp]	4.2	0.7223
AT1G67120			ATPases;nucleotide binding;ATP...		Lus10037616 [exp]	6.3	0.7949
AT3G45940			Glycosyl hydrolases family 31 ...		Lus10000778 [exp]	7.7	0.7084
AT5G66050			Wound-responsive family protei...		Lus10041852 [exp]	9.5	0.7562
AT1G51590		MNS1, MANIB	ALPHA-MANNOSIDASE IB, alpha-ma...		Lus10037312 [exp]	13.3	0.6830
AT3G21810	C3HZnF		Zinc finger C-x8-C-x5-C-x3-H t...		Lus10015103 [exp]	16.3	0.7502
AT3G50670		U1SNRNP, U1-70K	U1 small nuclear ribonucleopro...		Lus10014317 [exp]	20.1	0.7306

Compare expression of checked genes

Lus10015660 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.