Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G05680 120 / 8e-33 UGT74E2 Uridine diphosphate glycosyltransferase 74E2 (.1) AT1G05675 118 / 7e-32 UDP-Glycosyltransferase superfamily protein (.1) AT2G31750 114 / 3e-30 UGT74D1 UDP-glucosyl transferase 74D1 (.1) AT2G36970 110 / 1e-28 UDP-Glycosyltransferase superfamily protein (.1) AT2G43840 108 / 2e-28 UGT74F1 UDP-glycosyltransferase 74 F1 (.1.2) AT1G07260 108 / 2e-28 UGT71C3 UDP-glucosyl transferase 71C3 (.1) AT1G78270 108 / 4e-28 ATUGT85A4 UDP-glucosyl transferase 85A4 (.1) AT3G02100 108 / 5e-28 UDP-Glycosyltransferase superfamily protein (.1) AT1G22380 108 / 5e-28 ATUGT85A3 UDP-glucosyl transferase 85A3 (.1) AT5G14860 107 / 1e-27 UDP-Glycosyltransferase superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10003455 [exp] 289 / 2e-97 AT3G02100 291 / 1e-93 UDP-Glycosyltransferase superfamily protein (.1) Lus10015749 [exp] 268 / 5e-89 AT3G02100 274 / 6e-87 UDP-Glycosyltransferase superfamily protein (.1) Lus10015751 [exp] 257 / 6e-85 AT3G02100 281 / 7e-90 UDP-Glycosyltransferase superfamily protein (.1) Lus10003454 [exp] 255 / 5e-84 AT3G02100 268 / 1e-84 UDP-Glycosyltransferase superfamily protein (.1) Lus10015746 [exp] 230 / 2e-74 AT3G02100 300 / 4e-97 UDP-Glycosyltransferase superfamily protein (.1) Lus10015745 [exp] 221 / 7e-71 AT3G02100 288 / 1e-92 UDP-Glycosyltransferase superfamily protein (.1) Lus10003453 [exp] 214 / 3e-68 AT3G02100 276 / 6e-88 UDP-Glycosyltransferase superfamily protein (.1) Lus10015744 [exp] 209 / 1e-66 AT3G02100 271 / 6e-86 UDP-Glycosyltransferase superfamily protein (.1) Lus10015753 [exp] 193 / 7e-60 AT3G02100 297 / 1e-95 UDP-Glycosyltransferase superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.010G084900 [exp] 162 / 3e-48 AT3G02100 307 / 9e-100 UDP-Glycosyltransferase superfamily protein (.1) Potri.017G091500 [exp] 161 / 5e-48 AT3G02100 454 / 9e-158 UDP-Glycosyltransferase superfamily protein (.1) Potri.004G123500 [exp] 161 / 6e-48 AT3G02100 439 / 9e-152 UDP-Glycosyltransferase superfamily protein (.1) Potri.004G119700 [exp] 151 / 3e-44 AT3G02100 457 / 8e-159 UDP-Glycosyltransferase superfamily protein (.1) Potri.013G022800 [exp] 139 / 1e-39 AT3G02100 302 / 9e-98 UDP-Glycosyltransferase superfamily protein (.1) Potri.005G073766 [exp] 123 / 1e-33 AT1G22400 562 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) Potri.005G073800 [exp] 123 / 1e-33 AT1G22400 562 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) Potri.016G105300 [exp] 121 / 6e-33 AT1G22380 327 / 8e-107 UDP-glucosyl transferase 85A3 (.1) Potri.016G105400 [exp] 120 / 1e-32 AT1G22380 324 / 6e-106 UDP-glucosyl transferase 85A3 (.1) Potri.007G095000 [exp] 114 / 4e-30 AT1G22340 543 / 0.0 UDP-glucosyl transferase 85A7 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [flax] [poplar] GT-B PF00201 [flax] [poplar] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Lus10015748 pacid=23167618 polypeptide=Lus10015748 locus=Lus10015748.g ID=Lus10015748.BGIv1.0 annot-version=v1.0 ATGCCATTCCTTTGGGTGATCAGAACAGATTTTGTGATGCAAGGGTCGTCAGGTCTGGAGTTCCCAGATGGATACCTAGAGAGGGTTGTGAATCGGGGAA AAATGGTGGAGTGGACGGATCAAGAGCAAGTGCTTTCTCACCCTTCTGTAGGGTGTTTCCTGAGTCATTGCAGATGGAACTCGACACTGGATGGGTTGTG GTGCGGAGTTCCGTTTCTGTGTTGGCCTTACTTTGTGGATCAGTTCCATAAAAAGGAGGCTATATGTGAAGCTTGGAAAGTTGGTGTGAAACTGAAGGCT GAAGAAGATGGAACTGCAGGATTGATCACCAAGTCTGAAATTGCCAACAAGGTTGAACAACTTCTTAATGATGATACCATAAAAGAGAATGCAAATAGGT TGAGGGATGTTGCTAGGGAAACTGTGAAAGAGGGTGGCTCTTCGTTTCAGAGTTTATTTAGTATCATCAACCAATTATGTATTGGTTTGTGA
AA sequence Show only first row Show all	>Lus10015748 pacid=23167618 polypeptide=Lus10015748 locus=Lus10015748.g ID=Lus10015748.BGIv1.0 annot-version=v1.0 MPFLWVIRTDFVMQGSSGLEFPDGYLERVVNRGKMVEWTDQEQVLSHPSVGCFLSHCRWNSTLDGLWCGVPFLCWPYFVDQFHKKEAICEAWKVGVKLKA EEDGTAGLITKSEIANKVEQLLNDDTIKENANRLRDVARETVKEGGSSFQSLFSIINQLCIGL

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G05680		UGT74E2	Uridine diphosphate glycosyltr...		Lus10015748 [exp]	0	1
AT4G09990			Protein of unknown function (D...		Lus10007374 [exp]	4.0	0.6228
AT3G13790		ATCWINV1, ATBFR...	ARABIDOPSIS THALIANA CELL WALL...		Lus10022696 [exp]	7.7	0.6314
					Lus10016844 [exp]	7.9	0.6863
AT1G21270		WAK2	wall-associated kinase 2 (.1)		Lus10013385 [exp]	8.5	0.6492
					Lus10019981 [exp]	10.6	0.6947
AT3G03470		CYP89A9	"cytochrome P450, family 87, s...		Lus10020354 [exp]	11.3	0.5634
AT1G79500		ATKDSA1, KDSA	Aldolase-type TIM barrel famil...		Lus10027741 [exp]	16.9	0.5984
AT2G26820		ATPP2-A3	phloem protein 2-A3 (.1)		Lus10026891 [exp]	17.1	0.6592
AT4G29530			Pyridoxal phosphate phosphatas...		Lus10008573 [exp]	24.1	0.6303
AT5G58380		PKS2, CIPK10, S...	SNF1-RELATED PROTEIN KINASE 3....		Lus10030546 [exp]	25.3	0.6431

Compare expression of checked genes

Lus10015748 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.