Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G20960 3239 / 0 EMB1507 embryo defective 1507, U5 small nuclear ribonucleoprotein helicase, putative (.1.2) AT2G42270 3058 / 0 U5 small nuclear ribonucleoprotein helicase (.1) AT5G61140 1563 / 0 U5 small nuclear ribonucleoprotein helicase (.1.2) AT3G27730 279 / 1e-76 MER3, RCK ROCK-N-ROLLERS, ATP binding;ATP-dependent helicases;DNA helicases (.1) AT4G32700 115 / 5e-25 TEB TEBICHI, helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding (.2) AT1G79940 96 / 1e-19 ATERDJ2A DnaJ / Sec63 Brl domains-containing protein (.1.2.3.4) AT1G59760 84 / 1e-15 AtMTR4 homolog of yeast MTR4, RNA helicase, ATP-dependent, SK12/DOB1 protein (.1) AT4G21180 83 / 1e-15 ATERDJ2B DnaJ / Sec63 Brl domains-containing protein (.1) AT3G28870 76 / 5e-14 unknown protein AT3G46960 72 / 3e-12 RNA helicase, ATP-dependent, SK12/DOB1 protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10025168 [exp] 3845 / 0 AT1G20960 3286 / 0.0 embryo defective 1507, U5 small nuclear ribonucleoprotein helicase, putative (.1.2) Lus10040524 [exp] 1434 / 0 AT5G61140 3299 / 0.0 U5 small nuclear ribonucleoprotein helicase (.1.2) Lus10042628 [exp] 1098 / 0 AT1G20960 921 / 0.0 embryo defective 1507, U5 small nuclear ribonucleoprotein helicase, putative (.1.2) Lus10022082 [exp] 471 / 4e-146 AT1G20960 379 / 2e-114 embryo defective 1507, U5 small nuclear ribonucleoprotein helicase, putative (.1.2) Lus10042629 [exp] 437 / 1e-139 AT1G20960 402 / 3e-128 embryo defective 1507, U5 small nuclear ribonucleoprotein helicase, putative (.1.2) Lus10025169 [exp] 369 / 5e-116 AT1G20960 283 / 3e-87 embryo defective 1507, U5 small nuclear ribonucleoprotein helicase, putative (.1.2) Lus10014551 [exp] 259 / 1e-69 AT3G27730 1354 / 0.0 ROCK-N-ROLLERS, ATP binding;ATP-dependent helicases;DNA helicases (.1) Lus10032137 [exp] 226 / 2e-59 AT3G27730 1291 / 0.0 ROCK-N-ROLLERS, ATP binding;ATP-dependent helicases;DNA helicases (.1) Lus10022081 [exp] 174 / 1e-46 AT1G20960 218 / 1e-68 embryo defective 1507, U5 small nuclear ribonucleoprotein helicase, putative (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.015G095500 [exp] 3752 / 0 AT1G20960 3326 / 0.0 embryo defective 1507, U5 small nuclear ribonucleoprotein helicase, putative (.1.2) Potri.012G097300 [exp] 3323 / 0 AT1G20960 3440 / 0.0 embryo defective 1507, U5 small nuclear ribonucleoprotein helicase, putative (.1.2) Potri.015G056501 [exp] 1542 / 0 AT5G61140 3496 / 0.0 U5 small nuclear ribonucleoprotein helicase (.1.2) Potri.001G348200 [exp] 272 / 7e-74 AT3G27730 1542 / 0.0 ROCK-N-ROLLERS, ATP binding;ATP-dependent helicases;DNA helicases (.1) Potri.018G036600 [exp] 107 / 1e-22 AT4G32700 2501 / 0.0 TEBICHI, helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding (.2) Potri.004G228700 [exp] 89 / 2e-17 AT1G59760 1581 / 0.0 homolog of yeast MTR4, RNA helicase, ATP-dependent, SK12/DOB1 protein (.1) Potri.004G072200 [exp] 87 / 7e-17 AT1G79940 1087 / 0.0 DnaJ / Sec63 Brl domains-containing protein (.1.2.3.4) Potri.017G148800 [exp] 84 / 8e-16 AT1G79940 1062 / 0.0 DnaJ / Sec63 Brl domains-containing protein (.1.2.3.4) Potri.006G078000 [exp] 79 / 5e-14 AT2G06990 1634 / 0.0 hua enhancer 2, RNA helicase, ATP-dependent, SK12/DOB1 protein (.1) Potri.018G146001 [exp] 77 / 1e-13 AT2G06990 972 / 0.0 hua enhancer 2, RNA helicase, ATP-dependent, SK12/DOB1 protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0023 [flax] [poplar] P-loop_NTPase PF00271 [flax] [poplar] Helicase_C Helicase conserved C-terminal domain CL0023 [flax] [poplar] PF02889 [flax] [poplar] Sec63 Sec63 Brl domain CL0023 [flax] [poplar] P-loop_NTPase PF00270 [flax] [poplar] DEAD DEAD/DEAH box helicase
Representative CDS sequence Show only first row Show all	>Lus10016048 pacid=23154438 polypeptide=Lus10016048 locus=Lus10016048.g ID=Lus10016048.BGIv1.0 annot-version=v1.0 ATGGCTAATCTCGGTGGTGGTGCCGAGGCTCATGCTCGATTCAGGCAATACGAGTACAAAGCTAATTCTAGTCTGGTCCTCACAACAGACTCTCGTCCCC GAGACACTCATGAGCCTACTGGCGAGCCTGAGTCTCTCTGGGGCAGGATGGACCCCAAAAGCTTTGGCGATCGCGCTTTCATAGGCCGACCGCCTGAGCT AGACGAGAAGATTCAGAAATCTAAGAAAAAGAAGGAGAGGGATAGGCTAGCTGAACCTGTTCCTAGCCGCCAAGCAAAACGCCGCCGCATCAGAGAAGAG AGTGTGCTCACCTCAACTGAGGAAGGAGTATACCAGCCAAAGACCAAGGAAACTAGAGCTGCATATGAAGCCATGCTTAGTGTTATTCAAAGACAACTGG GTGGTCAGCCTCTTAATATTGTCAGCGCTGCTGCTGATGAAATTCTGGCTGTCCTTAAGAACGAGTCTTTCAAGACCCCTGACAAGAAGAAGGAAATTGA GAAGTTATTGAATCCAATTCCTGGAAGTGTGTTTGATGAGATGGTTTCCATTGGCCGTCTGATCACAGATTACCAAGATGCAGTTGATGTTGGGGGAGAT ACTGCAGCTAATGGCGATGATGCTCTTGACGATGATGTTGGTGTGGCTGTTGAGTTTGACGAAGACAATGAGGACGAGGATGACGAGAGTGATCTTGATG TGGTCCACGAAGATGAAGAGGATGATGATGATGATATGGTTGAGCGAGATGGTGGTCACGGTATGCAGGTGGGTGGCATGATTGATGACGATGACATGGG TCAGGCAAATGAGGGTCTGAATCTTAGTGTTCAGGATATTGATGCTTACTGGCTGCAGAGGAAGATCTCTCAGGCTTATGAACAACAGATTGACCCACAG CAGTGTCAAAAGCTTGCTGAAGAGGTGCTAAAGATACTTGCTGAGGGAGATGATAGGGAAGTTGAGACAAAGTTGGTGGTGCTCCTTGACTTTGAAAAGT TCAGCCTTATAAAATTTCTCTTACATAATAGACTGAAGATCGTGTGGTGTACCCGATTGGCTCGTGCGAAGGACCAAGAAGAGAGGAACCATATTGAAGA GGAAATGATGAACTCTGGTGCAGATTTGGCTGCGATTCTACAACAGCTTCGAGCTACTCGAGCAACAGCAAAAGAAAGGCAAAAGAACCTGGAGAAGAGC ATAAGAGAAGAGGCTCGCAGACTGAAGGATGATATTGTTGGTGATGAGGATAAGGACAGGACTGCCCTCGTGGACAGAGATGCAAACAGTGGTTGGGTCA AGAGCCAACTCAAGCTACTAGACCTGGACGATATTGCTTTCGCACAGGGCGGTCTGCTGATGGCAAATAAGAAGTGTGATCTTCCTCAAGGTTCTTACAG ACATATGAGCAAGGGTTTTGAAGAAGTTCACGTGCCAGCTTTGAAACCAAAACCTCTGGGTCCTGATGAGAAACTTGTGAGAATATCCGAGATGCCAGAA TGGGCACAGCCTGCTTTTAAAGGTATGCAACAACTGAACAGGGTGCAGAGTAAGGTCTATCAGACTGCCTTTTTCTGTGCCGACAACATTCTCTTGTGTG CCCCAACTGGGGCTGGGAAAACTAATGTTGCAGTTCTCACGATACTTCAGCAGCTTGGCCTTTACAGGAACAAGGATGGATCGTTTGATCATAACGGCTA TAAAATAGTTTATGTGGCGCCCATGAAAGCTCTTGTGGCTGAGGTTGTTGGCAATTTGTCCAATCGTCTGCAAGAATACGGGGTGAATGTGAAGGAACTA AGTGGAGATCAGACACTGACTCGTCAACAAATTGAAGAAACTCAGATAATTGTTACTACTCCAGAGAAATGGGATATCATTACCAGGAAATCTGGGGATC GCACTTACACTCGTCTAGTAAAACTTCTTATAATCGATGAGATCCATCTTCTTCATGATAACAGAGGTCCTGTACTGGAAAGTATAGTTGCTAGAACTAT TAGACAGGTTGAAACTACAAGGGACCATATCAGAATGGTGGGGTTGTCAGCTACACTGCCGAACTATGAAGATGTGGCACTTTTTTTAAGAGTTGACGTG GGAAAAGGAGTTGACGAGCGAAAAGGCCTTTTCCACTTTGATAATAGCTACAGACCTGTTCCTCTTGCACAACAGTATATTGGCGTCTCAGTCAAGAAGC CATTGCAGAGATTTCAGTTAATGAATGATCTTTGTTACGAGAAGGTGATGGCTGTAGCTGGAAAGCACCAAACTCTCATTTTTGTGCACTCAAGAAAGGA AACGGCTAAAACTGCGAGAGCAATACGAGACACTGCACTTGGTAAAGATACTCTCGGAAGATTCTTGAAGGAGGACAGTGCTAGCCGTGAGATCCTCCAG AGTCATACAGATATGGTTAGAAGTAATGATCTGAAAGATCTTTTGCCGTATGGCTTTGCGGTTCATCATGCAGGTTTGTCAAGGCCTGATCGTCAAATTG TGGAGGATCTTTTTGCCGGTGGGCATATACAAGTTTTGGTTTCTACTGCAACTCTAGCTTGGGGTGTAAATTTGCCAGCTCATACTGTGATCATTAAAGG GACCCAGATTTACAATCCAGAAAAAGGTGCATGGACTGAACTAAGTCCACTTGATGTTATGCAGATGTTGGGTCGTGCAGGTCGACCACAGTATGATACC TATGGTGAAGGTATTATCATCACGGGTCACAGTGAGCTGCAGTATTATCTTTCTTTGATGAATCAACAGCTTCCTATTGAAAGCCAATTCATATCCAAAT TGGCTGATCAGTTGAATGCGGAAATTGTTCTTGGTACCGTTCAGAATGCTAGAGAAGCCTGTAATTGGCTTGGTTATACATACTTGTATGTTCGAATGTT GAGGAATCCTACCCTTTATGGTCTACCAGCTGATATTCTTACCAGAGATATTACACTGGAGGAGAGGAGGGCTGATTTGGTTCATTCAGCTGCTACAATT TTGGACAAGAATAACTTGGTCAAGTATGACCGGAAAAGTGGATATTTCCAGGTTACCGACCTTGGTCGGATTGCCAGCTACTATTATATTACACACGGCA CCATATCCACTTATAATGAGCATCTGAAGCCCACTATGGGTGACATTGAGCTCTGCCGCTTGTTCTCACTCAGCGAAGAATTTAAGTATGTAACAGTGAG ACAAGATGAGAAAATGGAACTAGCAAAGCTGTTGGACCGTGTTCCAATTCCTGTCAAGGAGAGTCTGGAGGAGCCTAGTGCCAAGATTAATGTTCTTCTT CAAGCTTACATATCACAGCTGAAGCTTGAAGGTCTGTCGTTGACTACTGACATGGTTTATATAACTCAGAGTGCTGGTCGTCTTCTTCGAGCACTTTTTG AGATTGTATTGAAAAGAGGGTGGGCGCAATTGACTGAGAAGGCTTTAAACTTATGTAAGATGGTTAACAAGAAGATGTGGAGTGTTCAGACCCCCCTTCG TCAATTTAATGGGATACAGAAAGAGATTCTTATGAAATTGGAAAAGAAAGACTTGTCATGGGAAAGGTACTATGATCTTACATCCCAGGAAATTGGGGAA CTAATCCGTCTCCCAAAGATGGGCAGAGTACTGCATAAGTTCATCCATCAGTTCCCAAAGCTGAACCTTGCAGCTCATGTGCAGCCAATTACACGGACCA TTTTGAGGGTAGAGCTCACCATAACACCTGACTTCCAGTGGGATGACAGGGTTCATGGATATGTGGAGCCATTTTGGGTTATTGTTGAGGACAACGATGG GGAGGATATCCTGCACCACGAGTATTTTATGTTGAAGAAGCAGTATGTTGATGAGGACCACACGTTGAATTTCACAGTGCCCATCTACGAGCCGCTTCCA CCTCAGTACTTCATCCGTATTGTATCTGATAGGTGGCTTGGATCGCAAACTGTCCTGCCTGTGTCCTTCCGGCACCTAATTTTACCTGAAAAGTACCCAC CCCCAACTGAGCTGTTGGATTTGCAGCCTCTTCCAGTGACAGCTTTGAGAAATCCTATATATGAAGCTCTGTATAAGGGTTTTAAGCATTTTAATCCAGT CCAGACTCAGGTGTTCACTGTTCTGTATAATACAGATGACAATGTCTTGGTTGCTGCACCAACCGGGAGCGGGAAGACCATATGTGCCGAGTTTGCAATA TTGAGGAACTACCAAAAGGTACCCGATAGTGTGATGCGAGCTGTTTACATTGCTCCCCTTGAAGCAATTGCTAAAGAGAGGTATGGCGATTGGAAAGAGA AATTTGGTAAAGGGCTTGGGTTGACAGTTGTGGAGCTCAGTGGGGAAACGGCTACTGATCTGAAACTTATTGAGAAGGGACAAATAATTGTAAGCACTCC AGAGAAATGGGATGCTTTGTCTCGGCGTTGGAAGCAGAGGAAGTATGTTCAACAAGTTAGTCTGTTCGTAACGGATGAGCTTCATTTGATAGGTGGTCAG GGTGGTCCCGTGCTGGAGGTGATTGTCTCTCGGATGAGATATATTGCTAGTCAGACTGAGAACAAGATAAGAATTGTGGCTCTTTCATCTTCTCTTGCCA ATGCAAAAGATCTTGGAGAATGGATAGGTGCTACCACGCACGGTCTTTTCAATTTCCCACCTGGTGTTCGTCCTGTACCCCTTGAGATACACATTCAAGG GGTGGATATTGCTAATTTCGAGGCGAGGATGCAAGCTATGACAAAGCCAACTTATACTGCAATAGTTCAGCATGCAATGAACGGGAAGAATCGGAAGCCT GCTATTGTCTATGTTCCAACTAGGAGATATGTGAAAGTTACTGCAGAGGACTTGATGTCATACTCGGCAGTTGATGGTGGAGAGCAGCCTGCCTTTTTGT TACAACCCGTTGAAGAACTAGAGCCTTTCATAAATAAAATTAATGATGAAACTTTGAAGGTCACTTTGACATTTGGGGTTGGTTTCTTGCATGAAGGCTT GAGCAGTTCAGATCAGGAGGTTGTTTCCCGGTTGTTTGAAGTTGGGTGGATTCTGGTCTGTGTTGTGAGCAGTTCAATGTCATGGGGAGTGCCTTTGTTA GCACACTTGGTGGTTGTGATGGGAACTCAGTACTACGATGGCAGGGAAAATGCTCATACTGACTATCCGGTCACCGATCTTTTACAGATGATGGGCCATG CCAGTCGACCTTTGCTGGATAATTCTGGCAAGTGCGTCATTCTTTGTCACGCACCTCGCAAAGAATACTACAAGAAGTTCCTATATGAAGCCTTCCCTGT GGAAAGTCACTTGCACCATTTTCTGCATGATAATTTCAATGCTGAGATAGTTGCTGGAGTTATTGAGAACAAGCAGGATGCTGTAGATTATCTTACATGG ACTCTCATGTATAGGAGGTTGACTCAGAATCCAAATTACTACAATCTTCAAGGTGTGAGTCACAGGCATCTCTCTGACCATCTCTCGGAACTTGTGGAGA ATACCTTGAGCGATTTGGAAGCAAGTAGGTGCATTTCAATCGAGGACGACATGGACCTTTCTCCCTTGAATCTCGGCATGATAGCATCGTACTATTACAT CAGCTATACAACGATTGAGCGTTTCAGCTCGTCCTTGACTCCTAAAACAAAGATGAGGGGTCTTCTCGAGATTCTGGCTTCTTCCTCAGAGTATGGTCAG CTTCCAGTAAGACCCGGAGAGGAGGAGAAGCTCCGAAGGCTGTTGAACCACCAGAGGTTCTCAATTGAAAGTCCGAGATTCAGCGACCCACAGGTGAAGG CCAATGTTCTGCTCCAAGCTCATTTTTCGAGGCAAACAGTTGGCAAGAATCTGGCTCTTGACCAGCGAGAGGTTCTCCTATCTGCCGGCCGATTACTTCA AGCAATGGTGGATGTCATATCGAGCAACGGTTGGTTAAACCTCGCACTCCTCGCAATGGAAGTCAGCCAGATGGTGACGCAAGGGATGTGGGAGCGAGAT TCCGTGCTGATGCAGCTTCCACACTTCACAAGGGAGCTGGCCAAGAAGTGTCAGGAGAATCCCGGGAAGAACATAGAGACTGTTTTCGATTTGGTGGAGA TGGAGGATGATGAGAGACGCGAGCTTCTGCAGATGTCTGACCCCGAGTTGCTGGACATAGCCAAGTTCTGCAATCGCTACCCCAACATCGATATGGTATA CGAGGTGGTGGATGCCGAGAATGTGAGGGCAGGGGATGACGTCACCCTACAGGTGGTGCTGGAGCGGGATCTTGAAGGGAGGACAGAGGTGGGACCCGTG GAGACTTCAAGGTACCCGAAGGCGAAAGAAGAAGGATGGTGGCTGGTGGTTGGTGACACCAAGACAAATCAGCTGCTGGCGATCAAGAGGGTGTCACTGC AGAGGAAGCTGAAAGTGAAGCTTGAGTTTGCGGCGCCTGCTGAAGCTGGGAAGAAAAGCTACACGCTCTACTTCATGTGCGATTCTTATCTGGGTTGCGA TCAAGAGTATGGTTTTAGTGTTGATGTTGGTGCACCTGAGGAGGAGGGTGGTGCAAGAGAGTGA
AA sequence Show only first row Show all	>Lus10016048 pacid=23154438 polypeptide=Lus10016048 locus=Lus10016048.g ID=Lus10016048.BGIv1.0 annot-version=v1.0 MANLGGGAEAHARFRQYEYKANSSLVLTTDSRPRDTHEPTGEPESLWGRMDPKSFGDRAFIGRPPELDEKIQKSKKKKERDRLAEPVPSRQAKRRRIREE SVLTSTEEGVYQPKTKETRAAYEAMLSVIQRQLGGQPLNIVSAAADEILAVLKNESFKTPDKKKEIEKLLNPIPGSVFDEMVSIGRLITDYQDAVDVGGD TAANGDDALDDDVGVAVEFDEDNEDEDDESDLDVVHEDEEDDDDDMVERDGGHGMQVGGMIDDDDMGQANEGLNLSVQDIDAYWLQRKISQAYEQQIDPQ QCQKLAEEVLKILAEGDDREVETKLVVLLDFEKFSLIKFLLHNRLKIVWCTRLARAKDQEERNHIEEEMMNSGADLAAILQQLRATRATAKERQKNLEKS IREEARRLKDDIVGDEDKDRTALVDRDANSGWVKSQLKLLDLDDIAFAQGGLLMANKKCDLPQGSYRHMSKGFEEVHVPALKPKPLGPDEKLVRISEMPE WAQPAFKGMQQLNRVQSKVYQTAFFCADNILLCAPTGAGKTNVAVLTILQQLGLYRNKDGSFDHNGYKIVYVAPMKALVAEVVGNLSNRLQEYGVNVKEL SGDQTLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTRLVKLLIIDEIHLLHDNRGPVLESIVARTIRQVETTRDHIRMVGLSATLPNYEDVALFLRVDV GKGVDERKGLFHFDNSYRPVPLAQQYIGVSVKKPLQRFQLMNDLCYEKVMAVAGKHQTLIFVHSRKETAKTARAIRDTALGKDTLGRFLKEDSASREILQ SHTDMVRSNDLKDLLPYGFAVHHAGLSRPDRQIVEDLFAGGHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDT YGEGIIITGHSELQYYLSLMNQQLPIESQFISKLADQLNAEIVLGTVQNAREACNWLGYTYLYVRMLRNPTLYGLPADILTRDITLEERRADLVHSAATI LDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKESLEEPSAKINVLL QAYISQLKLEGLSLTTDMVYITQSAGRLLRALFEIVLKRGWAQLTEKALNLCKMVNKKMWSVQTPLRQFNGIQKEILMKLEKKDLSWERYYDLTSQEIGE LIRLPKMGRVLHKFIHQFPKLNLAAHVQPITRTILRVELTITPDFQWDDRVHGYVEPFWVIVEDNDGEDILHHEYFMLKKQYVDEDHTLNFTVPIYEPLP PQYFIRIVSDRWLGSQTVLPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPIYEALYKGFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAI LRNYQKVPDSVMRAVYIAPLEAIAKERYGDWKEKFGKGLGLTVVELSGETATDLKLIEKGQIIVSTPEKWDALSRRWKQRKYVQQVSLFVTDELHLIGGQ GGPVLEVIVSRMRYIASQTENKIRIVALSSSLANAKDLGEWIGATTHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAIVQHAMNGKNRKP AIVYVPTRRYVKVTAEDLMSYSAVDGGEQPAFLLQPVEELEPFINKINDETLKVTLTFGVGFLHEGLSSSDQEVVSRLFEVGWILVCVVSSSMSWGVPLL AHLVVVMGTQYYDGRENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNFNAEIVAGVIENKQDAVDYLTW TLMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLSDLEASRCISIEDDMDLSPLNLGMIASYYYISYTTIERFSSSLTPKTKMRGLLEILASSSEYGQ LPVRPGEEEKLRRLLNHQRFSIESPRFSDPQVKANVLLQAHFSRQTVGKNLALDQREVLLSAGRLLQAMVDVISSNGWLNLALLAMEVSQMVTQGMWERD SVLMQLPHFTRELAKKCQENPGKNIETVFDLVEMEDDERRELLQMSDPELLDIAKFCNRYPNIDMVYEVVDAENVRAGDDVTLQVVLERDLEGRTEVGPV ETSRYPKAKEEGWWLVVGDTKTNQLLAIKRVSLQRKLKVKLEFAAPAEAGKKSYTLYFMCDSYLGCDQEYGFSVDVGAPEEEGGARE

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G20960		EMB1507	embryo defective 1507, U5 smal...		Lus10016048 [exp]	0	1
AT1G20960		EMB1507	embryo defective 1507, U5 smal...		Lus10025168 [exp]	1.0	0.9909
AT1G20960		EMB1507	embryo defective 1507, U5 smal...		Lus10022082 [exp]	2.4	0.9675
AT1G36990			unknown protein		Lus10029655 [exp]	3.3	0.9502
AT5G02950			Tudor/PWWP/MBT superfamily pro...		Lus10040367 [exp]	4.0	0.9519
AT1G20960		EMB1507	embryo defective 1507, U5 smal...		Lus10042628 [exp]	4.5	0.9610
AT1G70640			octicosapeptide/Phox/Bem1p (PB...		Lus10038115 [exp]	5.5	0.9579
AT3G06010		ATCHR12	Homeotic gene regulator (.1)		Lus10034064 [exp]	6.0	0.9369
AT1G20960		EMB1507	embryo defective 1507, U5 smal...		Lus10025169 [exp]	7.7	0.9633
AT1G70640			octicosapeptide/Phox/Bem1p (PB...		Lus10008047 [exp]	9.5	0.9518
AT3G55160			unknown protein		Lus10007253 [exp]	9.5	0.9578

Compare expression of checked genes

Lus10016048 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.