Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G08060 146 / 7e-35 MOM1, MOM MORPHEUS MOLECULE 1, MORPHEUS MOLECULE, MAINTENANCE OF METHYLATION, ATP-dependent helicase family protein (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10021457 [exp] 2276 / 0 AT1G08060 152 / 8e-37 MORPHEUS MOLECULE 1, MORPHEUS MOLECULE, MAINTENANCE OF METHYLATION, ATP-dependent helicase family protein (.1.2) Lus10041322 [exp] 353 / 8e-99 AT1G08060 440 / 4e-125 MORPHEUS MOLECULE 1, MORPHEUS MOLECULE, MAINTENANCE OF METHYLATION, ATP-dependent helicase family protein (.1.2) Lus10037390 [exp] 344 / 6e-96 AT1G08060 455 / 7e-130 MORPHEUS MOLECULE 1, MORPHEUS MOLECULE, MAINTENANCE OF METHYLATION, ATP-dependent helicase family protein (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.005G010133 [exp] 258 / 1e-69 AT1G08060 166 / 5e-41 MORPHEUS MOLECULE 1, MORPHEUS MOLECULE, MAINTENANCE OF METHYLATION, ATP-dependent helicase family protein (.1.2) Potri.013G006000 [exp] 225 / 5e-59 AT1G08060 474 / 6e-136 MORPHEUS MOLECULE 1, MORPHEUS MOLECULE, MAINTENANCE OF METHYLATION, ATP-dependent helicase family protein (.1.2) Potri.004G212700 [exp] 186 / 5e-47 AT1G08060 464 / 2e-133 MORPHEUS MOLECULE 1, MORPHEUS MOLECULE, MAINTENANCE OF METHYLATION, ATP-dependent helicase family protein (.1.2)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10016103 pacid=23171816 polypeptide=Lus10016103 locus=Lus10016103.g ID=Lus10016103.BGIv1.0 annot-version=v1.0 ATGGCAGTAGAAACTAGGGCTAGCAGTGCATCTAAAGTAGACGAAAGCACAAATTCGAGAACTCTGAGGTCCTCATCGCGGTTAGCTAGGGAGAAATTGT TGAGGAGTGATACAAAGGCTAGTCCTTTGAACGTTCGGAAGTCGGTTAAGAGGAAACACAAGACCACTGTAAGGAAGTCTGAGAAGAGTAAGGAGGAATC TGTACCGGGTTCTTCGAGGTTGAAGAAGCCAAGGATGGCAAAGTTGACTAGTAAAACCAAAGAGGTGAACAACAGTGAAGTGGAGTTGTCCAAGGGGAAG ACGAGATATAATGCTCTTTCGTACAAAGCACTTTTCACGAAGAAGAAGAAGAAACAGAGAACTAATGTAGAAGCTGATTCGGTTAGTCCAACAACTTCAA AGACGGTTGATGATCAGTCTAGCAAAGCTTCTGCGACAGAAGATCGTGCACAACCGCAGCTTGGGGATGACATAGTGCTCGAGGCTGGATCTGATAATGA GATTGTTTCGGTGAGCATTGACAAATCCATGGCGTCGAAAAGAAAAAGAATAGAAGCCGGTTTAGTTGATGAGACTGCATTGGTGTCAAGTAAAGATGCC GATATCTCGCCCACTGATGCTGCTGCTGCAGGGGAAGATCAATCTCGAGTGAAGCGTGTTTCGAATGATTTTGCTGGAGGCCTTAAGAGGCAGAGGGTTA ATGATGAAGGAAAACAGCAAGAAGTTTGCTATTTGAACATCGAGTCAGATTGGGGCGATGCCTGTCACAAGTCGAAGTTAGATGGGAGTAATCCATCAGA AGTTGAAGTAATTATTATCGACAAGTCCATTGAACCCGATTGGCTGCAGAATTCACAGAGCAATCTACATTGTGATCTGAAGCCGAAAATAGCATCGCTT TGTGAAGTTCTAAGATTCCCGGATGATGTCAAATGTATAGTTGTAAGCTTTCTCGACTACATAGTGAACAATCAATATCATCAACTGGCTTCAAAGCGAG AATCTGGATTGCAGGCTTTTCAGATTGCTTTGTGTTGGACTGCTGCTTCTTTGCTGAAGTACAAGATTGACCATATGGAATCTCTGGGACTTGCTAAGGA GAGATTAAACTTCGGATGCAAGAAAGAACATGCTGACTTTGAGTATTCGATGTTACGATGTTTGAAGAAATTATTTCTATCCCATCATCAGCGAAGTAAA TATGTTTCTGACGACCAGTTGCATGCTAGTCCTTCCAACAGATCAATTTCGTCAAGTCCTAAAGAAAACGGGGATGGAGTTCAAATCCAGCAACCACTTG AATTGGCACATCAAGATTTTTCTAGAAGTATCAAAGACATCCACAAGAAGTGTGATAAGCAGTTTAGAAAACTGGTGGAGCAGCAAGCACAACAGAGAGA GGACTTGCTTAAAAAGTACGAGGATCAAAAGGCTCAGCTTGAGAAGAAGCAGGAAATGGAGGCAGCTGTCATTTGCCTTTACAGCCCTGATTCAATGAGA CCAGACAAGCTCGAGTTCATGGAAGCTGAATATGCCGAGAAATTCAAGAAACTTGAACGTGAGAGGGTCACAGAACTTAAAAATCTCGAGGCAATGCAGT CTGCTTCAAGGAAAACATTGGAAGAGAATAAACTGAAATGGGTTGGAGGATTGGAAACCTGGGCGAAGGAAGAATTAATGCCTAGGCTGCCTCGAAAAGA TACTGGGCAGACTTCAGGAACTGGTGTTTCTTCTGATGTTCATCCCAAGCAAGTTACTTGTCAGGCAAGTTTAACTGACCGTGGAGAAGAAGAAACAACC CAAATGGTGAAGTCTGCTGCTGAAGTGATTCATGAAACACCATCTACTACGGTGCATGTTGAATCAACACAAGGTGAGGTTACTTCGGAACCATTGGCAT CTACTGGTGAATCTGAAAGACCTCTGACAGATCAACAAGTCAAGGATAGTTCTCTTCAAAGTCGAGACGAGGAACCGGGTTCCACAATACCTGAAACAGC TACCATTACTGGCTTTGGCTTAATAGATAATAATGCTGATGGAGAGATTGAAGAAGGCGAAATTTCCGATGCTAAGGAAGGAGACGGTGAGATTTTATCT CCTGAATCTGAAAGACCTCTGACAGACCAACTTATGAAGCATAGTTCTCTTCAAAATCAAGACACCGGTACAGAGAAAGTTGGATTAGGGGTTCTAGACT TACCACTTGGAGTTGACGCTGGTCTTCAAGGTGAACCGGTTTCTGAAATACCTGAAACAGATACCACTACGACTACTTGCTTAGTAGGTAATAATGCTGA CGGAGAGATTGAAGAAGGTGAAATTTCTGGTGCTGAGGAAGGAGGCGGTGAGATTTTATCTTCTGAATCTGAAAGACCCATGACAGACCAACAAATGAAG GATAGTTCTCTTCAAAGTCAAGACACCGGTACAGAGAATGTTGGATTAGGGGTTCCAGACTTACCACTTGGAGTTGACACTGGTCTTCAAGGTGAACCGG TTTCTGCAATACCTGAAACAGCTACCACTACGACTACTTGCTTAGTAGATAATAATGTTGACGGAGAGATTGAAGAAGGTGAAATTTCTGGTACTGAGGA AGGAGGTGGTGAGATTTTATCTGCTGAATCTGAAAGACCCGTGACAAAAAAACAAATGAAGGAAAGTTATCTTCAAAGTCAAGACACCGGTACAGAGAAT GTTGGATTAGAAGTACTGGATTTGTGTCCCGAAGTTGATAAATTGGACGATCAGAATGATGGAAGCACAGAGCAGGATGTAGCAGCATCATCTATCCCTA GTCGAAAAGACAGTAGCAAAGAACTTTTTGCGACAGATTCTCCTTTGATACAACCTGAAACCTCCATAACAGGAGTCTCTTCTAGTAGAATAGATCAGCA GGATCCAGGGAGGATTCTTGCAGGCGTGTCTAATGTAAGCACTGATCTGGCAGATGGAAGCAGTCATCAGGAGGGAACGGTTACCGGAGTTCACAAGGAA GCAACTGCAGAAGTTGTGGGTGTTGGGGTGAAAAATCTAGCCTCTGCTGAAGTATTAGAAGATCATAATGATGGAATCCTAATGCACGATCCGAAAGCTC CTGTTACCAACCAAAGTGATCAATCCGAACAAATTGTTCACTCGATTTCAACTCCGGTGCAGGATGGTGTAGTTTCATGTGTCTCAGGCTCTGACACAAA TACAGAAGTAGCAGATGTGGCAGACTTATGCATAGAGAACAATGGAACCAGAGTTGGTCAAGAGAGTCGTTCTTCTGAAGATACTGAAGTGCATCATCAG GATGATCAATCCCAACATATTGTTCAAACAAGTTCAGCGCCAGTATCTATTGGAGTTGGTCAAGCGTATGGATCTTCTGAAGACACGGCAGTGCATCACC AGGATGCAACCGCGATTCCACTAGTGGCCGAGACAGCCACTACTGCTAGAATAGCCATGGGGAACTCTTGTACAAAGAACAACATATCTTCTCAGAATCT AGGAGCTTCTACTGCCAGGAGAGATGATGGTTCAGGAGAAAGTTCTATGACAAATTCAACCTCAATGCAGCCAGAAGTTGCGGTCTCTGCACAATCCAGC TCATCGCTCCCGAATCAGCCTGTTCAAGATGAACTACGTCGACAGCTGCCTGCATCTACTAGAGCAAATGTCTCGGAAACAGTAACTGCACCTTCTACTT CAGCAAACCGTGCCCGCCTTCCACAACCTGCACCTGTTTACCGAATGCCTCTCCCTTTTTTGGGCCCCGATCCTCTCCAGAACGAATTGGATAGAGTATC CAGAGTTGTAGATCAGATAGTCAATATACACGAAAAGGAGAAGCTGCAGTTGAGATTCGACTGCGAAAAGGAAATGGAGGAAGTAGTTGCACAGATACGT CGGAAGTACGAAGCTATAGCCAAGGAGTCAGAAACTGAATTCGCGCGAAACAAGTCGAAACTGGATGCAAAGCACTATAAAATCCGGATGAACAAGCTCC TGGCTGATGTGTTCAGGTGCAAATGCGTGGACAGTCGAGCAAACAAATCTGTTGGAGTTGTGCAAGATGCTGCTGCTAGTTTTATGCAGCAATTCCAGAA TCTATCTTCGCAGCCTACGCAACCATACACAGGACAGCGATTCTCAACTGCTGCTTCTCGGCCTTTGCAACCTCCACCAAATGGGTTAGTAGCGAATCAT CAACCGACCGGTTCGCCTCATCTATCAATCTCTCGAGCACATCCTGTCGCTCATCGCTTCCCAACACCAACTCATATCCCTCAATCTTCAAGGCCACTCA ACATCAGCACCCTCACCCCTACTACAGCAAGCAGCAATCTCCATCAATTCGGTAGCCAGTTCCGAGCGCCTGCTCCACACATGCAAGCCGTTCGAGCTAT GACATCACATGGATTGCAAAGCCATCTATGTCCTCATAGTGTTGTCCGTCCCTCTACTGTAGTCTCCATAACTGCATCCTCGCCAGTTCCTCCTGCTTTG GTCAATGCACCTGCAATCGTGCCTCCTGAAGTTCGGCCAAATGGTGCGCAAGGGAACTCGACGCAGCAAAACGAGGTCGTTTATTTATCAGACGATGATT GA
AA sequence Show only first row Show all	>Lus10016103 pacid=23171816 polypeptide=Lus10016103 locus=Lus10016103.g ID=Lus10016103.BGIv1.0 annot-version=v1.0 MAVETRASSASKVDESTNSRTLRSSSRLAREKLLRSDTKASPLNVRKSVKRKHKTTVRKSEKSKEESVPGSSRLKKPRMAKLTSKTKEVNNSEVELSKGK TRYNALSYKALFTKKKKKQRTNVEADSVSPTTSKTVDDQSSKASATEDRAQPQLGDDIVLEAGSDNEIVSVSIDKSMASKRKRIEAGLVDETALVSSKDA DISPTDAAAAGEDQSRVKRVSNDFAGGLKRQRVNDEGKQQEVCYLNIESDWGDACHKSKLDGSNPSEVEVIIIDKSIEPDWLQNSQSNLHCDLKPKIASL CEVLRFPDDVKCIVVSFLDYIVNNQYHQLASKRESGLQAFQIALCWTAASLLKYKIDHMESLGLAKERLNFGCKKEHADFEYSMLRCLKKLFLSHHQRSK YVSDDQLHASPSNRSISSSPKENGDGVQIQQPLELAHQDFSRSIKDIHKKCDKQFRKLVEQQAQQREDLLKKYEDQKAQLEKKQEMEAAVICLYSPDSMR PDKLEFMEAEYAEKFKKLERERVTELKNLEAMQSASRKTLEENKLKWVGGLETWAKEELMPRLPRKDTGQTSGTGVSSDVHPKQVTCQASLTDRGEEETT QMVKSAAEVIHETPSTTVHVESTQGEVTSEPLASTGESERPLTDQQVKDSSLQSRDEEPGSTIPETATITGFGLIDNNADGEIEEGEISDAKEGDGEILS PESERPLTDQLMKHSSLQNQDTGTEKVGLGVLDLPLGVDAGLQGEPVSEIPETDTTTTTCLVGNNADGEIEEGEISGAEEGGGEILSSESERPMTDQQMK DSSLQSQDTGTENVGLGVPDLPLGVDTGLQGEPVSAIPETATTTTTCLVDNNVDGEIEEGEISGTEEGGGEILSAESERPVTKKQMKESYLQSQDTGTEN VGLEVLDLCPEVDKLDDQNDGSTEQDVAASSIPSRKDSSKELFATDSPLIQPETSITGVSSSRIDQQDPGRILAGVSNVSTDLADGSSHQEGTVTGVHKE ATAEVVGVGVKNLASAEVLEDHNDGILMHDPKAPVTNQSDQSEQIVHSISTPVQDGVVSCVSGSDTNTEVADVADLCIENNGTRVGQESRSSEDTEVHHQ DDQSQHIVQTSSAPVSIGVGQAYGSSEDTAVHHQDATAIPLVAETATTARIAMGNSCTKNNISSQNLGASTARRDDGSGESSMTNSTSMQPEVAVSAQSS SSLPNQPVQDELRRQLPASTRANVSETVTAPSTSANRARLPQPAPVYRMPLPFLGPDPLQNELDRVSRVVDQIVNIHEKEKLQLRFDCEKEMEEVVAQIR RKYEAIAKESETEFARNKSKLDAKHYKIRMNKLLADVFRCKCVDSRANKSVGVVQDAAASFMQQFQNLSSQPTQPYTGQRFSTAASRPLQPPPNGLVANH QPTGSPHLSISRAHPVAHRFPTPTHIPQSSRPLNISTLTPTTASSNLHQFGSQFRAPAPHMQAVRAMTSHGLQSHLCPHSVVRPSTVVSITASSPVPPAL VNAPAIVPPEVRPNGAQGNSTQQNEVVYLSDDD

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G08060		MOM1, MOM	MORPHEUS MOLECULE 1, MORPHEUS ...		Lus10016103 [exp]	0	1
AT4G34430		ATSWI3D, CHB3	SWITCH/SUCROSE NONFERMENTING 3...		Lus10042329 [exp]	1.0	0.9735
AT4G17330		ATG2484-1	G2484-1 protein (.1)		Lus10004730 [exp]	3.0	0.9601
AT2G30470	B3	HSI2, VAL1	VP1/ABI3-LIKE 1, high-level ex...		Lus10011245 [exp]	3.2	0.9436
AT4G17330		ATG2484-1	G2484-1 protein (.1)		Lus10007793 [exp]	3.2	0.9611
AT3G23780		NRPE2, DMS2, DR...	DEFECTIVE IN MERISTEM SILENCIN...		Lus10039677 [exp]	5.1	0.9307
AT3G53940			Mitochondrial substrate carrie...		Lus10022597 [exp]	5.3	0.9201
AT3G05680		EMB2016	embryo defective 2016 (.1.2)		Lus10013587 [exp]	6.0	0.9506
AT5G41580			RING/U-box superfamily protein...		Lus10032307 [exp]	6.2	0.9101
AT1G06230		GTE4	global transcription factor gr...		Lus10033623 [exp]	6.5	0.9304
AT5G35753			Domain of unknown function (DU...		Lus10006380 [exp]	7.9	0.9235

Compare expression of checked genes

Lus10016103 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.