Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G36780 484 / 4e-168 UDP-Glycosyltransferase superfamily protein (.1) AT2G36800 482 / 3e-167 UGT73C5, DOGT1 UDP-GLUCOSYL TRANSFERASE 73C5, don-glucosyltransferase 1 (.1) AT2G36770 470 / 2e-162 UDP-Glycosyltransferase superfamily protein (.1) AT2G36750 468 / 8e-162 UGT73C1, UGT72C1 UDP-glucosyl transferase 73C1 (.1) AT2G36760 464 / 2e-160 UGT73C2 UDP-glucosyl transferase 73C2 (.1) AT2G36790 462 / 2e-159 UGT73C6 UDP-glucosyl transferase 73C6 (.1) AT3G53160 455 / 7e-157 UGT73C7 UDP-glucosyl transferase 73C7 (.1) AT3G53150 417 / 1e-141 UGT73D1 UDP-glucosyl transferase 73D1 (.1) AT2G15480 377 / 2e-126 UGT73B5 UDP-glucosyl transferase 73B5 (.1.2) AT4G34131 371 / 6e-124 UGT73B3 UDP-glucosyl transferase 73B3 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10012011 [exp] 852 / 0 AT2G36780 488 / 8e-170 UDP-Glycosyltransferase superfamily protein (.1) Lus10003323 [exp] 698 / 0 AT2G36800 493 / 2e-171 UDP-GLUCOSYL TRANSFERASE 73C5, don-glucosyltransferase 1 (.1) Lus10003322 [exp] 652 / 0 AT2G36780 468 / 9e-162 UDP-Glycosyltransferase superfamily protein (.1) Lus10014437 [exp] 610 / 0 AT2G36780 545 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Lus10023939 [exp] 490 / 2e-170 AT2G36780 485 / 7e-169 UDP-Glycosyltransferase superfamily protein (.1) Lus10022628 [exp] 470 / 7e-164 AT2G36780 310 / 1e-101 UDP-Glycosyltransferase superfamily protein (.1) Lus10023893 [exp] 464 / 3e-160 AT2G36780 495 / 1e-172 UDP-Glycosyltransferase superfamily protein (.1) Lus10014403 [exp] 446 / 4e-153 AT2G36780 506 / 6e-177 UDP-Glycosyltransferase superfamily protein (.1) Lus10023894 [exp] 434 / 3e-148 AT2G36780 516 / 0.0 UDP-Glycosyltransferase superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.012G048700 [exp] 479 / 3e-166 AT2G36800 550 / 0.0 UDP-GLUCOSYL TRANSFERASE 73C5, don-glucosyltransferase 1 (.1) Potri.006G120600 [exp] 450 / 5e-155 AT3G53150 617 / 0.0 UDP-glucosyl transferase 73D1 (.1) Potri.016G097400 [exp] 450 / 4e-154 AT3G53150 626 / 0.0 UDP-glucosyl transferase 73D1 (.1) Potri.001G303700 [exp] 412 / 3e-140 AT2G15480 558 / 0.0 UDP-glucosyl transferase 73B5 (.1.2) Potri.001G303300 [exp] 408 / 2e-138 AT2G15480 555 / 0.0 UDP-glucosyl transferase 73B5 (.1.2) Potri.009G099032 [exp] 399 / 6e-135 AT2G15490 558 / 0.0 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.009G098400 [exp] 389 / 5e-131 AT2G15490 505 / 8e-177 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.001G303600 [exp] 387 / 2e-130 AT4G34131 568 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.001G303000 [exp] 386 / 6e-130 AT4G34131 573 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.001G302400 [exp] 386 / 7e-130 AT2G15490 494 / 1e-172 UDP-glycosyltransferase 73B4 (.1.2.3)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [flax] [poplar] GT-B PF00201 [flax] [poplar] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Lus10016268 pacid=23142634 polypeptide=Lus10016268 locus=Lus10016268.g ID=Lus10016268.BGIv1.0 annot-version=v1.0 ATGGGTTCATCCCCAACAATGACCACAATCAAAACCCAACAAGTCCACTTCCTTCTCTTCCCATTCATGGCACAGGGCCACATGATTCCAATGGTCGACA TCGCCAAGCTTCTCGCCACTCGAGGAGCCAAGGTCACCATAGTCACCACCCCGGTCAACGCTGCTCGGTTCGAGTCCCCTCTCCGTCGGTCCAACCTCCG GATCGACCTGGTCGAGCTACGCTTCCCCTGTGTTGAAGCAGGGCTCCCCGAAGGCTGCGAGAACGCCGACCTGCTCCCTTCTTTTGCCTATCTCCAATCC ATGATGAAGGCAGCCGCCATGATGGAACCTCAGGTGGAGTCCCTGCTCGAAAGCATGAGGGTAAAACCAGACTGCATCATCTCCGATTTCTGCTTGCCGT ACGTCAATAAAGTGGCGAAGAAGTTTGACGTCCCTAGGGTTAGCTTCCATGGGATTGGATGTTTCTCCCTCGTGTGTTTGCAATGCATCATAATCCATGA GGAGGAATTAGCTCGGATGGCGAGCTCCGATCACGAGTACTTTGTTCTCCCCGGAATGCCGGGGGAGATCAAGTTCTCCAATGCTCAGTTGCCGCTGCAA ATCAGGAAGAACGGGCATGAGGATCCTAAAGAAGAGTCTCCTAATCACAACGCGATTAAAGTAGACTCGGAAGCTTACGGTGTGATCGTGAACAGCTTCG AAGAACTCGAACCCGAGTACTTCTCTAAGTGCAAGAGCTCGAGACCGGGCAAAATATGGTGCGTCGGGCCCGTTTCCTTAACCAATCTCAACGAATTGGA CAAAATCCAAAGAGGGCATAACAGCATTTCTCTCACACATCAGTCCCTGGAGTGGCTAAACACCAAAGAACCCAAGACGGTCCTTTACATCTGCTTAGGA TCGATATGCAACCTCTCGTCCCAACAGTTGATCGAGCTGGCACTAGGCCTCGAGGCCTCCGGAACCCCCTTCATATGGGCGATCCGCGAGAAAGAGTTTA CAAAAGACCTGTTTACGTGGATCGTGGATGACGGTTTCGAGGACAGGGTTGCGGGGAGAGGGTTGCTGATTAGAGGGTGGGCACCCCAAGTCTCGATCTT GTCTCATAGTTCGGTGGGTGGGTTCTTAACACACTGTGGGTGGAACTCTTCTTTAGAAGGGATCAGTGCGGGGATCCCCCTCGTTACGTGGCCGCTTTTC GGGGACCAATTCAGTAACGAGAAGCTAATCGTCGATGTTTTAAAGATAGGAGTGAGGATTGGTGCAGAAAAGCCAACGTTTTGGGGTGGGAAAGAAGAGA CGACAGAGGTGAGTGTTCAGAGAGCAGACGTGGAGAGAGCGGTTAGGTTGGCGATGGAGGGCGGCGAGGAAGGAGACGGGAGAAGGAAGAGAGCGGAGGA GCTTGCCGGAATCGCGAGGACAGCCGTGGAGAGAGGTGGATCTTCGTATAAGAACGTCGACGTTTTGATTGAAGACATTGCGAAACATCAAGAGGAGAGG AGAAATCATGGGTGA
AA sequence Show only first row Show all	>Lus10016268 pacid=23142634 polypeptide=Lus10016268 locus=Lus10016268.g ID=Lus10016268.BGIv1.0 annot-version=v1.0 MGSSPTMTTIKTQQVHFLLFPFMAQGHMIPMVDIAKLLATRGAKVTIVTTPVNAARFESPLRRSNLRIDLVELRFPCVEAGLPEGCENADLLPSFAYLQS MMKAAAMMEPQVESLLESMRVKPDCIISDFCLPYVNKVAKKFDVPRVSFHGIGCFSLVCLQCIIIHEEELARMASSDHEYFVLPGMPGEIKFSNAQLPLQ IRKNGHEDPKEESPNHNAIKVDSEAYGVIVNSFEELEPEYFSKCKSSRPGKIWCVGPVSLTNLNELDKIQRGHNSISLTHQSLEWLNTKEPKTVLYICLG SICNLSSQQLIELALGLEASGTPFIWAIREKEFTKDLFTWIVDDGFEDRVAGRGLLIRGWAPQVSILSHSSVGGFLTHCGWNSSLEGISAGIPLVTWPLF GDQFSNEKLIVDVLKIGVRIGAEKPTFWGGKEETTEVSVQRADVERAVRLAMEGGEEGDGRRKRAEELAGIARTAVERGGSSYKNVDVLIEDIAKHQEER RNHG

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G36780			UDP-Glycosyltransferase superf...		Lus10016268 [exp]	0	1
AT4G35160			O-methyltransferase family pro...		Lus10013945 [exp]	2.6	0.9287
AT1G19630		CYP722A1	"cytochrome P450, family 722, ...		Lus10025991 [exp]	7.9	0.9262
AT4G14750		IQD19	IQ-domain 19 (.1)		Lus10009187 [exp]	13.0	0.8995
AT2G47810	CCAAT	NF-YB5	"nuclear factor Y, subunit B5"...		Lus10041355 [exp]	14.1	0.8857
AT2G19130			S-locus lectin protein kinase ...		Lus10042266 [exp]	15.6	0.9245
AT2G40200	bHLH	bHLH051	basic helix-loop-helix (bHLH) ...		Lus10013917 [exp]	16.6	0.9213
					Lus10002693 [exp]	16.7	0.9157
AT1G67940		ABCI17, AtSTAR1...	ARABIDOPSIS THALIANA NON-INTRI...		Lus10031069 [exp]	17.3	0.9214
					Lus10018556 [exp]	19.3	0.9029
AT1G72890			Disease resistance protein (TI...		Lus10006929 [exp]	24.1	0.9210

Compare expression of checked genes

Lus10016268 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.