Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10017013 [exp] 55 / 7e-10 AT1G47960 112 / 4e-31 cell wall / vacuolar inhibitor of fructosidase 1 (.1) Lus10016318 [exp] 0 / 1 AT1G47960 115 / 2e-32 cell wall / vacuolar inhibitor of fructosidase 1 (.1) Lus10017040 [exp] 0 / 1 AT1G47960 92 / 3e-23 cell wall / vacuolar inhibitor of fructosidase 1 (.1)
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10016322 pacid=23161895 polypeptide=Lus10016322 locus=Lus10016322.g ID=Lus10016322.BGIv1.0 annot-version=v1.0 ATGGCGGAATTGGGGTCGGCCCAATCCAAACTATCGTCCAGGTCCCTCGTCTCAAAGCGTGGAAAATATCGATGCTCTCAGGCTCAAGTTGAGAGTCGGC CATGGCGTCCTCTCCAAATTTGGGCTGCCCTTTACTCACCGCTTCCACCACCTCGTCGTGGTCGCCGTGTACCACATAATCGTAACCCTCGGCGCGGCTT CTTCGACTCCGGGTTCGTCACCAGCAATTCCTTTATCTCTTTCGAAATCACCAGCCCTTTCGCCTGCACGGCGTCGATCAAAACCAAGGCCAGCGACGTG ACGTCGTTGGCCCTTCAAGCCGCGAGGGTCGGCGATGAGAGCCGACACGCAGACTTTGAAGTATGGGGTTTGCTGGCAAACATCTTCGATGAAGACCTTG TTCGCAGTCGATGGTGA
AA sequence Show only first row Show all	>Lus10016322 pacid=23161895 polypeptide=Lus10016322 locus=Lus10016322.g ID=Lus10016322.BGIv1.0 annot-version=v1.0 MAELGSAQSKLSSRSLVSKRGKYRCSQAQVESRPWRPLQIWAALYSPLPPPRRGRRVPHNRNPRRGFFDSGFVTSNSFISFEITSPFACTASIKTKASDV TSLALQAARVGDESRHADFEVWGLLANIFDEDLVRSRW

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10016322 [exp]	0	1
					Lus10000359 [exp]	2.4	0.8586
AT1G11040			HSP40/DnaJ peptide-binding pro...		Lus10042725 [exp]	5.7	0.8833
AT4G26220			S-adenosyl-L-methionine-depend...		Lus10009484 [exp]	9.4	0.8190
AT2G39550		GGB, ATGGT-IB, ...	GERANYLGERANYLTRANSFERASE-I BE...		Lus10019318 [exp]	16.0	0.7685
AT2G41510		ATCKX1, CKX1	cytokinin oxidase/dehydrogenas...		Lus10042035 [exp]	17.2	0.8334
AT3G02840			ARM repeat superfamily protein...		Lus10021822 [exp]	18.1	0.7923
AT4G35530			phosphatidylinositolglycan-rel...		Lus10002922 [exp]	22.6	0.8203
AT5G63080			2-oxoglutarate (2OG) and Fe(II...		Lus10001249 [exp]	22.8	0.8504
AT3G55005		TON1B	tonneau 1b (TON1b) (.1)		Lus10023478 [exp]	32.6	0.8290
					Lus10031302 [exp]	44.5	0.8113

Compare expression of checked genes

Lus10016322 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.