Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G25680 476 / 2e-166 MOT1 molybdate transporter 1 (.1) AT1G80310 362 / 2e-121 MOT2 molybdate transporter 2, sulfate transmembrane transporters (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10025816 [exp] 405 / 3e-138 AT1G80310 577 / 0.0 molybdate transporter 2, sulfate transmembrane transporters (.1) Lus10038286 [exp] 371 / 6e-125 AT1G80310 571 / 0.0 molybdate transporter 2, sulfate transmembrane transporters (.1) Lus10019046 [exp] 44 / 5e-05 AT2G25680 55 / 3e-09 molybdate transporter 1 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.006G245900 [exp] 529 / 0 AT2G25680 496 / 4e-174 molybdate transporter 1 (.1) Potri.006G246000 [exp] 515 / 0 AT2G25680 556 / 0.0 molybdate transporter 1 (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10016331 pacid=23161803 polypeptide=Lus10016331 locus=Lus10016331.g ID=Lus10016331.BGIv1.0 annot-version=v1.0 ATGGAGTCAATGCAGCAAACTATCTCCATTCCCACCCAAACCCAAACCCCACATCAACAGCAATCAACCTCCACCACCGCAACAATCCTTCAAAACCTGA GAAAAAACCTATCTTTCAAATCGAAATGGGCAGCAGAGCTGAACGGCGCCATGGGAGACCTAGGCACGTACATCCCGATCATCCTAGCCTTAACCCTCTC CAGCAACCTAAACCTCGGAACCACATTAATCTTCACCGGAGTCTACAACATCCTCACCGGCGCAATCTACGGCGTCCCCATGCCCGTCCAGCCCATGAAA TCAATTGCCGCCGTCGCCATATCCAGCGGTTCCGATTTTGGCGTCCCGGAGATAATGGCCGCCGGAATCTGCACTGGGGGAGCTCTGTTAGTCTTAGGAG CAACAGGATTGATGCAATTGATGTACAGATTAATCCCTCTCTGCGTCGTCAGAGGAATCCAGCTCTCGCAAGGGTTGGCATTCGCGTTCACCGCAGTTAA GTACGTTAGAAACGTTCAGGATTTCTCGAAATCGAAATCCGGAATTGGGGAAAGGGGATGGTTAGGGTTGGACGGATTGATTCTAGCGATTTCCTGCGCT TGCTTTGTTATAATCGTGAACGGTGCCGGTGAGAAACAGGATGGTGATTCGGAGGTATCAGGTTCGAATTCGGGGGAAGAAGAAGAAAGGAGGAAGAGGG TTGGTAGTTATAAGAAAGTGATTGCATTACTTCCAAGTGCATTGATTGTATTTGTATTAGGTGTGATATTGGCATTGATTAGAAACCCCAAGATAGTTAA CGACTTCAAATTCGGGCCATCTCGAATCCAGATAGTGAAGATTTCGAAACAGGCGTGGAAGCGAGGGTTCGTAAAGGGAACAATCCCACAACTGCCACTA TCAGTGCTGAACTCGGTGATCGCAGTGTGCAAGCTGTCGTCCGATCTGTTCCCCGGGAAGGACTTCTCGGCGAGTTCTGTCTCGGGGACGGTCGGGTTGA TGAATCTGGTGGGGTGCTGGTTCGGGGCGATGCCGTGTTGCCATGGAGCAGGGGGGCTGGCGGGGCAGTATAAGTTTGGTGGGAGGAGTGGTGGGTGTGT TGTGGTGCTGGGGATGGCTAAGTTGGGTTTGGGTTTGGTGTTGGGGAGTTCTCTTGTGGCGATATTGAAAGGGTTTCCTGTGGGAGTGTTGGGTGTGCTG CTGTTGTTTGCTGGGATTGAACTTGCGATTGCTGCGAGAGATGTGAGTCGTAAAGAGGATGCGTTTGTGATGCTGGTTTGTTGCGCTGTTTCGCTGGTTG GGTCGAGTGCTGCTCTTGGGTTCTTGTGTGGGATGGTTGTGCATTTGCTTCTCGAGTTTAGGGACTTCATTTGCTAA
AA sequence Show only first row Show all	>Lus10016331 pacid=23161803 polypeptide=Lus10016331 locus=Lus10016331.g ID=Lus10016331.BGIv1.0 annot-version=v1.0 MESMQQTISIPTQTQTPHQQQSTSTTATILQNLRKNLSFKSKWAAELNGAMGDLGTYIPIILALTLSSNLNLGTTLIFTGVYNILTGAIYGVPMPVQPMK SIAAVAISSGSDFGVPEIMAAGICTGGALLVLGATGLMQLMYRLIPLCVVRGIQLSQGLAFAFTAVKYVRNVQDFSKSKSGIGERGWLGLDGLILAISCA CFVIIVNGAGEKQDGDSEVSGSNSGEEEERRKRVGSYKKVIALLPSALIVFVLGVILALIRNPKIVNDFKFGPSRIQIVKISKQAWKRGFVKGTIPQLPL SVLNSVIAVCKLSSDLFPGKDFSASSVSGTVGLMNLVGCWFGAMPCCHGAGGLAGQYKFGGRSGGCVVVLGMAKLGLGLVLGSSLVAILKGFPVGVLGVL LLFAGIELAIAARDVSRKEDAFVMLVCCAVSLVGSSAALGFLCGMVVHLLLEFRDFIC

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G25680		MOT1	molybdate transporter 1 (.1)		Lus10016331 [exp]	0	1
AT3G52760			Integral membrane Yip1 family ...		Lus10017054 [exp]	4.9	0.9387
AT1G26570		UGD1, ATUGD1	UDP-glucose dehydrogenase 1 (....		Lus10037096 [exp]	5.5	0.9391
AT3G55950		CCR3, ATCRR3	CRINKLY4 related 3 (.1)		Lus10040663 [exp]	6.0	0.9414
AT5G03080			Phosphatidic acid phosphatase ...		Lus10019919 [exp]	7.3	0.9312
AT5G12890			UDP-Glycosyltransferase superf...		Lus10031248 [exp]	8.7	0.9354
AT1G19300		ATGATL1, GATL1,...	PARVUS, GAOLAOZHUANGREN 1, GAL...		Lus10010789 [exp]	11.7	0.9402
AT3G17390		MAT4, SAMS3, MT...	S-ADENOSYLMETHIONINE SYNTHETAS...		Lus10004522 [exp]	12.3	0.9313
AT4G08810		SUB1	calcium ion binding (.1)		Lus10013761 [exp]	12.7	0.9338
AT2G38360		PRA1.B4	prenylated RAB acceptor 1.B4 (...		Lus10014234 [exp]	14.5	0.9312
AT1G06780		GAUT6	galacturonosyltransferase 6 (....		Lus10024859 [exp]	15.1	0.9310

Compare expression of checked genes

Lus10016331 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.