Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G29560 689 / 0 ENOC cytosolic enolase (.1) AT2G36530 423 / 2e-144 ENO2, LOS2 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) AT1G74030 405 / 5e-137 ENO1 enolase 1 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10040711 [exp] 871 / 0 AT2G29560 789 / 0.0 cytosolic enolase (.1) Lus10015028 [exp] 417 / 3e-142 AT2G36530 802 / 0.0 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) Lus10002844 [exp] 415 / 4e-141 AT2G36530 800 / 0.0 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) Lus10003374 [exp] 412 / 8e-140 AT2G36530 799 / 0.0 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) Lus10038904 [exp] 410 / 3e-139 AT2G36530 792 / 0.0 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) Lus10038963 [exp] 403 / 5e-136 AT1G74030 808 / 0.0 enolase 1 (.1) Lus10027255 [exp] 398 / 5e-134 AT1G74030 799 / 0.0 enolase 1 (.1) Lus10035579 [exp] 391 / 3e-132 AT2G36530 775 / 0.0 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) Lus10008647 [exp] 340 / 2e-109 AT2G36530 687 / 0.0 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.009G040700 [exp] 713 / 0 AT2G29560 809 / 0.0 cytosolic enolase (.1) Potri.006G116800 [exp] 419 / 8e-143 AT2G36530 814 / 0.0 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) Potri.015G131100 [exp] 418 / 2e-142 AT2G36530 811 / 0.0 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) Potri.012G057500 [exp] 414 / 2e-140 AT1G74030 810 / 0.0 enolase 1 (.1) Potri.012G129300 [exp] 156 / 2e-44 AT2G36530 260 / 1e-85 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0227 [flax] [poplar] Enolase_N PF03952 [flax] [poplar] Enolase_N Enolase, N-terminal domain CL0256 [flax] [poplar] Enolase_TIM PF00113 [flax] [poplar] Enolase_C Enolase, C-terminal TIM barrel domain
Representative CDS sequence Show only first row Show all	>Lus10016447 pacid=23144790 polypeptide=Lus10016447 locus=Lus10016447.g ID=Lus10016447.BGIv1.0 annot-version=v1.0 ATGCTCTCTCGGAAAATTGAGGACGCCGTCAATGCCGCCGTCCGGGCGAAAACTCCCGATCCCGTTCTCTTTATCTCGAATCATATGAAGAAGGCGGTTC CTTCAGTTATAACGAAGATTCGAGCGAGGCAAATCCTCGATAGCAGAGGGATTCCAACTGTTGAAGTGGACTTGTACACTAACAAAGGCATGTTCCGCGC TTCTGCTCCTAGCGGCGATGTTACTGGAATGTATGAAGCTGTGGAGCTACGTGATGGGGACAAAGGTGTGTATCTTGGAAATGGTGTGATGAGAGCTGTC AGGAACATCAATGAGAAAATCTCTGAAGCATTGGTTGGTATGGATCCAACACTGCAGTCTCAAATTGATCAGGCCATGATAGACTTGGACAAAACAGAAA AGAAGGGTGAACTTGGAGCAAATGCGATATTAGCAGTGTCAATTGCTGCTTGCAAGGCTGGGGCTGCTGAAAGAGAGGCATGTCTTGTTTTAGTCTTGAT ATTGTGTTGTTTTGCACATTTTCAATTATTTTTGTTCTTCCAACTTACGGATCTGACGTTTACATCTCAGCTTCCACTCTACAAGCATATTGCTGAGCTT TTTGGTAACACCAGCTTGACACTTCCTGTCCCTGCGTTCACTGTCATCAGTGGTGGAAAGCATGCTGGAAATAATTTGGCCATTCAGGATATCATGATTC TTCCAATTGGAGCCAACAGATTCGAGGAGGCATTGCAGATGGGCTCTGAGACTTATTATCATCTAAAGGCTGCTCTTCGCTGCCCATTTATTGATTGTAA TTTCTGTATTAAATATAACAGGCTGTTATTACAGAAAAATATGGCATACATGGATGCAATGTTGGTGAAGATGGTGGCTTTGCTCCAAACATCTCAAGGC AAGTATTTGTTTCCCATATACGAGGACACCATACCTCAAGGCATTAACATTCGAGAAGGTTTAGATTTTGTTAAAGAGGCTATTGACAGAACAGGTAACA AAGACAGGATAAAAATAGCAATTGATTTTGCTGCCACTGACTTTTGCATAGGCACAAAGTATGATTTGGATTTCAAAACTCCTAACAAATCAGGGCAAAA TTTCAAGTCAGGGGAGGATATGATTGAGATGTACAAAGAGCTATGTGCTGAGTACCAAATTGTGTCAGTTGAAGATCCATTCGACAAAGAAGACTGGGAA CACATCAAATACTTTTCTAGCCTTGGACTGTGTCAGGTGGTAGGTGATGGCTTGTTAATGTCGAATCCAAAACGAGTAGAGAGAGCCATACGCGAATCCA CTTGTAATGCTCTTCTTCTCAAGGTCAATCAGATCGGAACCGTAACGGAAGTGTTCGAGGTAGTGAGGCTGGCTAAGGACGCCCACTGGGGAGTAGTGGC ATCTCATAGAAGCGGAGAGACAGAAGATTCGTTCATATCCGATTTAGCCGTAGGGCTCGGGTTAGGTCAGATAAAAGCCGGAGCTCCTTGCAGAGGAGAG CGTGTGGCCAAGTACAATCAGTTGCTCCGGATCGAGGAAGAGTTCGGGGATCAGATGGTTTACGCAGGAGAAGATTGGAGATCGATCTGA
AA sequence Show only first row Show all	>Lus10016447 pacid=23144790 polypeptide=Lus10016447 locus=Lus10016447.g ID=Lus10016447.BGIv1.0 annot-version=v1.0 MLSRKIEDAVNAAVRAKTPDPVLFISNHMKKAVPSVITKIRARQILDSRGIPTVEVDLYTNKGMFRASAPSGDVTGMYEAVELRDGDKGVYLGNGVMRAV RNINEKISEALVGMDPTLQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEREACLVLVLILCCFAHFQLFLFFQLTDLTFTSQLPLYKHIAEL FGNTSLTLPVPAFTVISGGKHAGNNLAIQDIMILPIGANRFEEALQMGSETYYHLKAALRCPFIDCNFCIKYNRLLLQKNMAYMDAMLVKMVALLQTSQG KYLFPIYEDTIPQGINIREGLDFVKEAIDRTGNKDRIKIAIDFAATDFCIGTKYDLDFKTPNKSGQNFKSGEDMIEMYKELCAEYQIVSVEDPFDKEDWE HIKYFSSLGLCQVVGDGLLMSNPKRVERAIRESTCNALLLKVNQIGTVTEVFEVVRLAKDAHWGVVASHRSGETEDSFISDLAVGLGLGQIKAGAPCRGE RVAKYNQLLRIEEEFGDQMVYAGEDWRSI

---

DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

---

Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G29560		ENOC	cytosolic enolase (.1)		Lus10016447 [exp]	0	1
AT2G29560		ENOC	cytosolic enolase (.1)		Lus10040711 [exp]	2.0	0.7434
AT3G20800			Cell differentiation, Rcd1-lik...		Lus10009728 [exp]	23.5	0.7151
AT2G44060			Late embryogenesis abundant pr...		Lus10008337 [exp]	24.8	0.7084
AT1G61240			Protein of unknown function (D...		Lus10038303 [exp]	43.7	0.7030
AT2G30920		ATCOQ3, EMB3002	embryo defective 3002, coenzym...		Lus10020863 [exp]	46.6	0.6735
AT2G36210			SAUR-like auxin-responsive pro...		Lus10017018 [exp]	50.5	0.6658
AT3G05030		ATNHX2, NHX2	sodium hydrogen exchanger 2 (....		Lus10004141 [exp]	61.6	0.6654
AT5G42860			unknown protein		Lus10010231 [exp]	62.6	0.6623
AT3G04580		EIN4	ETHYLENE INSENSITIVE 4, Signal...		Lus10005517 [exp]	65.2	0.6066
AT5G27490			Integral membrane Yip1 family ...		Lus10031511 [exp]	68.6	0.6833

Compare expression of checked genes

Lus10016447 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.