Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G09270 199 / 4e-64 ATGSTU8 glutathione S-transferase TAU 8 (.1) AT2G29420 197 / 2e-63 GST25, ATGSTU7 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) AT2G29450 182 / 2e-57 ATGSTU1, AT103-1A, ATGSTU5 ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 1, glutathione S-transferase tau 5 (.1) AT2G29490 182 / 2e-57 GST19, ATGSTU1 GLUTATHIONE S-TRANSFERASE 19, glutathione S-transferase TAU 1 (.1) AT2G29480 179 / 2e-56 GST20, ATGSTU2 GLUTATHIONE S-TRANSFERASE 20, glutathione S-transferase tau 2 (.1) AT2G29440 178 / 4e-56 GST24, ATGSTU6 GLUTATHIONE S-TRANSFERASE 24, glutathione S-transferase tau 6 (.1) AT2G29460 171 / 5e-53 GST22, ATGSTU4 GLUTATHIONE S-TRANSFERASE 22, glutathione S-transferase tau 4 (.1) AT2G29470 170 / 8e-53 GST21, ATGSTU3 GLUTATHIONE S-TRANSFERASE 21, glutathione S-transferase tau 3 (.1) AT1G59670 167 / 1e-51 ATGSTU15 glutathione S-transferase TAU 15 (.1) AT1G59700 165 / 1e-50 ATGSTU16 glutathione S-transferase TAU 16 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10016469 [exp] 258 / 4e-87 AT2G29420 230 / 2e-76 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Lus10016471 [exp] 257 / 6e-87 AT2G29420 234 / 8e-78 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Lus10040761 [exp] 254 / 1e-85 AT2G29420 233 / 1e-77 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Lus10040764 [exp] 249 / 1e-83 AT2G29420 229 / 6e-76 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Lus10021102 [exp] 231 / 1e-76 AT3G09270 245 / 2e-82 glutathione S-transferase TAU 8 (.1) Lus10021103 [exp] 215 / 1e-70 AT3G09270 250 / 1e-84 glutathione S-transferase TAU 8 (.1) Lus10040727 [exp] 211 / 2e-68 AT2G29420 216 / 6e-71 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Lus10001640 [exp] 191 / 6e-61 AT2G29420 206 / 6e-67 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Lus10001491 [exp] 179 / 3e-56 AT3G09270 185 / 5e-59 glutathione S-transferase TAU 8 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.013G072400 [exp] 183 / 6e-58 AT3G09270 161 / 2e-49 glutathione S-transferase TAU 8 (.1) Potri.010G035500 [exp] 174 / 2e-54 AT1G10370 301 / 2e-104 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1) Potri.016G104500 [exp] 171 / 2e-54 AT3G09270 196 / 2e-64 glutathione S-transferase TAU 8 (.1) Potri.010G032800 [exp] 171 / 6e-53 AT1G10370 303 / 3e-105 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1) Potri.010G070900 [exp] 169 / 1e-52 AT2G29420 221 / 9e-73 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.016G023200 [exp] 167 / 7e-52 AT3G09270 189 / 1e-60 glutathione S-transferase TAU 8 (.1) Potri.006G024200 [exp] 167 / 2e-51 AT2G29420 188 / 4e-60 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.010G061200 [exp] 166 / 4e-51 AT3G09270 202 / 8e-66 glutathione S-transferase TAU 8 (.1) Potri.016G023340 [exp] 164 / 1e-50 AT2G29420 194 / 3e-62 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.010G061301 [exp] 162 / 8e-50 AT2G29420 202 / 9e-66 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0172 [flax] [poplar] Thioredoxin PF02798 [flax] [poplar] GST_N Glutathione S-transferase, N-terminal domain CL0497 [flax] [poplar] GST_C PF00043 [flax] [poplar] GST_C Glutathione S-transferase, C-terminal domain
Representative CDS sequence Show only first row Show all	>Lus10016467 pacid=23144875 polypeptide=Lus10016467 locus=Lus10016467.g ID=Lus10016467.BGIv1.0 annot-version=v1.0 ATGGCGGAAGAAGAAATCAAGCTACTTGGCGTCTGGGCCAGTCCTTTTAACCAGAGGGTAGAAGCAGTTTTGAAACTGAAAGGGTTGAAGTATGAGTTCG TGCAAGAAGACCTTTCGAACAAGAGCGATCTTCTCCTTCAATCCAACCCGATTTACAAGAAGATTCCTGTTCTGATCCACAACGGGAATCCGGTCGTGGA ATCTCTCGTCATAATGGAGTACATCGACCAAACCTGGGGAAATGACTACCCTATCCTTCCTGACGATCCGTATGACAGAGCCATCGCTCGTTTCTGGGCC AAGTTCTTCGATGACAAGGTAGTGCCAGCGGTATGGAAGGCAATTCTGGTGAAAGACAAGGAGAAAGAGGAGGCCGCCATTGAAGAATTCTCACAGCAGC TGAAGATGCTGGAGGGAGAGCTCATTAAAGAGAAGAAGGATTATTTCGGAGGGGAGAAAATTGGGTTTGTAGACATTGCAGCATTCTTCGTCTTGAATTT GGTCGGAGTTATGCAGGAAGCAAAGGGGGCAGAGCAGGAGCCGATGATCACGGAGGACAAGTTTCCGGTTGTGTTCAAGTGGATGGAGAAGGTCGGAGAC AAAAACAACGTCGTTGGGCAGGTCGTGCCTCCGAGGGACAAGCATGTTGAGTTCATACGTGGTCGAATCGCTGTAGCAGCTGCAGCTGCAGCTGCAGGAT CTGCTTGA
AA sequence Show only first row Show all	>Lus10016467 pacid=23144875 polypeptide=Lus10016467 locus=Lus10016467.g ID=Lus10016467.BGIv1.0 annot-version=v1.0 MAEEEIKLLGVWASPFNQRVEAVLKLKGLKYEFVQEDLSNKSDLLLQSNPIYKKIPVLIHNGNPVVESLVIMEYIDQTWGNDYPILPDDPYDRAIARFWA KFFDDKVVPAVWKAILVKDKEKEEAAIEEFSQQLKMLEGELIKEKKDYFGGEKIGFVDIAAFFVLNLVGVMQEAKGAEQEPMITEDKFPVVFKWMEKVGD KNNVVGQVVPPRDKHVEFIRGRIAVAAAAAAAGSA

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G29420		GST25, ATGSTU7	GLUTATHIONE S-TRANSFERASE 25, ...		Lus10016467 [exp]	0	1
AT2G29420		GST25, ATGSTU7	GLUTATHIONE S-TRANSFERASE 25, ...		Lus10016471 [exp]	1.7	0.9587
AT3G13620			Amino acid permease family pro...		Lus10013757 [exp]	2.0	0.9443
AT1G75130		CYP721A1	"cytochrome P450, family 721, ...		Lus10016310 [exp]	2.8	0.9571
AT3G61220		SDR1	short-chain dehydrogenase/redu...		Lus10040932 [exp]	3.2	0.9365
AT2G47730		GST6, ATGSTF5, ...	Arabidopsis thaliana glutathio...		Lus10026643 [exp]	3.7	0.9340
AT1G22150		SULTR1;3	sulfate transporter 1;3 (.1)		Lus10036437 [exp]	3.9	0.9438
AT1G76690		OPR2, ATOPR2	ARABIDOPSIS 12-OXOPHYTODIENOAT...		Lus10001274 [exp]	4.0	0.9403
AT1G76690		OPR2, ATOPR2	ARABIDOPSIS 12-OXOPHYTODIENOAT...		Lus10009473 [exp]	4.6	0.9509
AT5G49960			unknown protein		Lus10013455 [exp]	5.5	0.9409
AT1G51340			MATE efflux family protein (.1...		Lus10026303 [exp]	6.5	0.9407

Compare expression of checked genes

Lus10016467 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.