Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G29420 122 / 5e-36 GST25, ATGSTU7 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) AT1G74590 117 / 7e-34 ATGSTU10 glutathione S-transferase TAU 10 (.1) AT2G29440 114 / 8e-33 GST24, ATGSTU6 GLUTATHIONE S-TRANSFERASE 24, glutathione S-transferase tau 6 (.1) AT5G62480 113 / 3e-32 GST14B, ATGSTU9 GLUTATHIONE S-TRANSFERASE 14B, GLUTATHIONE S-TRANSFERASE 14, glutathione S-transferase tau 9 (.1.2) AT3G09270 112 / 4e-32 ATGSTU8 glutathione S-transferase TAU 8 (.1) AT2G29480 111 / 1e-31 GST20, ATGSTU2 GLUTATHIONE S-TRANSFERASE 20, glutathione S-transferase tau 2 (.1) AT2G29450 110 / 3e-31 ATGSTU1, AT103-1A, ATGSTU5 ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 1, glutathione S-transferase tau 5 (.1) AT2G29490 106 / 9e-30 GST19, ATGSTU1 GLUTATHIONE S-TRANSFERASE 19, glutathione S-transferase TAU 1 (.1) AT2G29470 105 / 2e-29 GST21, ATGSTU3 GLUTATHIONE S-TRANSFERASE 21, glutathione S-transferase tau 3 (.1) AT2G29460 102 / 3e-28 GST22, ATGSTU4 GLUTATHIONE S-TRANSFERASE 22, glutathione S-transferase tau 4 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10040764 [exp] 167 / 1e-53 AT2G29420 229 / 6e-76 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Lus10016470 [exp] 133 / 2e-40 AT2G29420 166 / 6e-52 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Lus10016469 [exp] 128 / 4e-38 AT2G29420 230 / 2e-76 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Lus10040761 [exp] 128 / 4e-38 AT2G29420 233 / 1e-77 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Lus10016471 [exp] 126 / 2e-37 AT2G29420 234 / 8e-78 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Lus10021102 [exp] 122 / 9e-36 AT3G09270 245 / 2e-82 glutathione S-transferase TAU 8 (.1) Lus10021103 [exp] 121 / 1e-35 AT3G09270 250 / 1e-84 glutathione S-transferase TAU 8 (.1) Lus10040727 [exp] 118 / 3e-34 AT2G29420 216 / 6e-71 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Lus10040762 [exp] 114 / 4e-34 AT2G29420 127 / 3e-38 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.016G104500 [exp] 117 / 4e-35 AT3G09270 196 / 2e-64 glutathione S-transferase TAU 8 (.1) Potri.004G196700 [exp] 113 / 2e-32 AT5G62480 229 / 9e-76 GLUTATHIONE S-TRANSFERASE 14B, GLUTATHIONE S-TRANSFERASE 14, glutathione S-transferase tau 9 (.1.2) Potri.010G070900 [exp] 107 / 3e-30 AT2G29420 221 / 9e-73 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.015G042000 [exp] 107 / 3e-30 AT2G29460 197 / 7e-64 GLUTATHIONE S-TRANSFERASE 22, glutathione S-transferase tau 4 (.1) Potri.010G061800 [exp] 105 / 1e-29 AT2G29420 187 / 1e-59 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.008G174900 [exp] 105 / 2e-29 AT2G29420 184 / 1e-58 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.013G072400 [exp] 105 / 2e-29 AT3G09270 161 / 2e-49 glutathione S-transferase TAU 8 (.1) Potri.010G061301 [exp] 104 / 4e-29 AT2G29420 202 / 9e-66 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.012G052200 [exp] 104 / 6e-29 AT2G29420 220 / 2e-72 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.001G436600 [exp] 103 / 8e-29 AT1G78380 318 / 2e-111 GLUTATHIONE TRANSFERASE 8, A. THALIANA GLUTATHIONE S-TRANSFERASE TAU 19, glutathione S-transferase TAU 19 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0172 [flax] [poplar] Thioredoxin PF02798 [flax] [poplar] GST_N Glutathione S-transferase, N-terminal domain
Representative CDS sequence Show only first row Show all	>Lus10016468 pacid=23144781 polypeptide=Lus10016468 locus=Lus10016468.g ID=Lus10016468.BGIv1.0 annot-version=v1.0 ATGATAATAAAAATCAAGAAAAAATGGCAGACGAAATCAAGCTACTTTGGAACCTGGGCCAGTCTCTACAGCCGGAGAATCGAACTAGTCCTCAAACTCA AAGGCTTAAACTTCCAATACATCGAAGATGACCTCTCCAACAAGAGCGAGCTTCTCCTCAACTCCAACCCAGTTCACAAGAAGATCCCTGTCTTCTTCCA CAACGGCAAGCCGATTTCAGAATCGCTAATCATTATACAGTACATCGATGAGACATGGGATCACAACCCAGTCCTCCTTCCTAAAGATCCTTGCGAAAGA GCTGCTTCTCGTTTCTGGGCGAAGTTCGTTGATGAAAGGTAA
AA sequence Show only first row Show all	>Lus10016468 pacid=23144781 polypeptide=Lus10016468 locus=Lus10016468.g ID=Lus10016468.BGIv1.0 annot-version=v1.0 MIIKIKKKWQTKSSYFGTWASLYSRRIELVLKLKGLNFQYIEDDLSNKSELLLNSNPVHKKIPVFFHNGKPISESLIIIQYIDETWDHNPVLLPKDPCER AASRFWAKFVDER

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G29420		GST25, ATGSTU7	GLUTATHIONE S-TRANSFERASE 25, ...		Lus10016468 [exp]	0	1
AT5G64420			DNA polymerase V family (.1)		Lus10018176 [exp]	2.2	0.8634
AT4G18880	HSF	AT-HSFA4A ,HSF ...	ARABIDOPSIS THALIANA HEAT SHOC...		Lus10029268 [exp]	16.6	0.8876
AT1G11340			S-locus lectin protein kinase ...		Lus10013244 [exp]	29.2	0.8796
					Lus10022119 [exp]	33.5	0.8310
AT1G70505			unknown protein		Lus10030895 [exp]	37.3	0.8609
AT5G27730			Protein of unknown function (D...		Lus10020653 [exp]	49.9	0.8303
AT5G27540		MIRO1, EMB2473	embryo defective 2473, MIRO-re...		Lus10015186 [exp]	55.2	0.8470
AT3G07040		RPS3, RPM1	RESISTANCE TO PSEUDOMONAS SYRI...		Lus10018937 [exp]	55.6	0.8441
AT1G51760		JR3, IAR3	JASMONIC ACID RESPONSIVE 3, IA...		Lus10006864 [exp]	81.1	0.8399
					Lus10035267 [exp]	96.7	0.8154

Compare expression of checked genes

Lus10016468 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.