Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G29420 145 / 9e-44 GST25, ATGSTU7 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) AT3G09270 141 / 3e-42 ATGSTU8 glutathione S-transferase TAU 8 (.1) AT2G29490 130 / 4e-38 GST19, ATGSTU1 GLUTATHIONE S-TRANSFERASE 19, glutathione S-transferase TAU 1 (.1) AT2G29480 127 / 8e-37 GST20, ATGSTU2 GLUTATHIONE S-TRANSFERASE 20, glutathione S-transferase tau 2 (.1) AT2G29450 127 / 1e-36 ATGSTU1, AT103-1A, ATGSTU5 ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 1, glutathione S-transferase tau 5 (.1) AT2G29440 126 / 3e-36 GST24, ATGSTU6 GLUTATHIONE S-TRANSFERASE 24, glutathione S-transferase tau 6 (.1) AT1G78340 124 / 2e-35 ATGSTU22 glutathione S-transferase TAU 22 (.1) AT2G29470 123 / 3e-35 GST21, ATGSTU3 GLUTATHIONE S-TRANSFERASE 21, glutathione S-transferase tau 3 (.1) AT1G59700 123 / 6e-35 ATGSTU16 glutathione S-transferase TAU 16 (.1) AT1G17170 120 / 4e-34 ATGSTU24 Arabidopsis thaliana Glutathione S-transferase \(class tau\) 24, glutathione S-transferase TAU 24 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10016469 [exp] 186 / 8e-60 AT2G29420 230 / 2e-76 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Lus10040764 [exp] 171 / 7e-54 AT2G29420 229 / 6e-76 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Lus10040762 [exp] 144 / 6e-45 AT2G29420 127 / 3e-38 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Lus10021102 [exp] 147 / 1e-44 AT3G09270 245 / 2e-82 glutathione S-transferase TAU 8 (.1) Lus10016467 [exp] 146 / 4e-44 AT2G29420 207 / 2e-67 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Lus10001640 [exp] 140 / 8e-42 AT2G29420 206 / 6e-67 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Lus10021103 [exp] 139 / 3e-41 AT3G09270 250 / 1e-84 glutathione S-transferase TAU 8 (.1) Lus10040727 [exp] 135 / 9e-40 AT2G29420 216 / 6e-71 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Lus10016468 [exp] 130 / 3e-39 AT2G29420 140 / 7e-43 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.016G104500 [exp] 138 / 7e-42 AT3G09270 196 / 2e-64 glutathione S-transferase TAU 8 (.1) Potri.012G052200 [exp] 125 / 4e-36 AT2G29420 220 / 2e-72 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.011G140800 [exp] 123 / 3e-35 AT1G78380 318 / 1e-111 GLUTATHIONE TRANSFERASE 8, A. THALIANA GLUTATHIONE S-TRANSFERASE TAU 19, glutathione S-transferase TAU 19 (.1) Potri.015G042000 [exp] 123 / 4e-35 AT2G29460 197 / 7e-64 GLUTATHIONE S-TRANSFERASE 22, glutathione S-transferase tau 4 (.1) Potri.001G437400 [exp] 123 / 4e-35 AT1G78380 316 / 2e-110 GLUTATHIONE TRANSFERASE 8, A. THALIANA GLUTATHIONE S-TRANSFERASE TAU 19, glutathione S-transferase TAU 19 (.1) Potri.001G431700 [exp] 122 / 5e-35 AT1G78380 307 / 4e-107 GLUTATHIONE TRANSFERASE 8, A. THALIANA GLUTATHIONE S-TRANSFERASE TAU 19, glutathione S-transferase TAU 19 (.1) Potri.010G035500 [exp] 122 / 6e-35 AT1G10370 301 / 2e-104 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1) Potri.001G436800 [exp] 122 / 7e-35 AT1G17180 308 / 2e-107 glutathione S-transferase TAU 25 (.1) Potri.010G070900 [exp] 122 / 1e-34 AT2G29420 221 / 9e-73 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.010G032800 [exp] 122 / 1e-34 AT1G10370 303 / 3e-105 GLUTATHIONE S-TRANSFERASE U17, GLUTATHIONE S-TRANSFERASE 30B, GLUTATHIONE S-TRANSFERASE 30, EARLY-RESPONSIVE TO DEHYDRATION 9, GLUTATHIONE S-TRANSFERASE TAU 17, Glutathione S-transferase family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0172 [flax] [poplar] Thioredoxin PF02798 [flax] [poplar] GST_N Glutathione S-transferase, N-terminal domain
Representative CDS sequence Show only first row Show all	>Lus10016470 pacid=23144848 polypeptide=Lus10016470 locus=Lus10016470.g ID=Lus10016470.BGIv1.0 annot-version=v1.0 ATGGGGGACCAAATCAAGCTACTTGGAATGTGGGCTAGTCCGTTCAGCGGCAGGATCGAATTGGTCCTCAAACTGAAAGGCTTACAGTTCGACTATGTGG AAGAAGACCTTTTGAACAAGAGCGATCTTCTCCTCAACTCCAACCCAGTTCACAAGAAGATACCTGTCTTATTCCATAACGGCAAGCCAATCTCGGAATC CCTCGTCATCATCGAGTACATTGACGAAACCTGGGGATCAAGCTACTCAGTCCTGCCGAAAGATCCCTACGACAGAGCCATTGCTCGCTTCTGGGCTAAG TTCGTTGACGAAAAAGTGTTGCTGACGGCATTCAAGGCTTACATAGGGAAGGGGGACAAAGAACAAGAAGATTCGATCGAGGAATTCATGCTAGCAAGTG GAAAATCTGGAGGGGGAGCTGAAGGGGAAGGAGTATTTCGGAGGGGAAAGGATCGGGTTTGTGGACATTGCCGCGTTCTTCATCTTGTATTGGCTTGGAG CGTTGGAGGAAGTTGCGGAAGCAGATCTGTTGACAAAAGAGAAGTTCCCTGGAATGTTCGAATGGATGGATAA
AA sequence Show only first row Show all	>Lus10016470 pacid=23144848 polypeptide=Lus10016470 locus=Lus10016470.g ID=Lus10016470.BGIv1.0 annot-version=v1.0 MGDQIKLLGMWASPFSGRIELVLKLKGLQFDYVEEDLLNKSDLLLNSNPVHKKIPVLFHNGKPISESLVIIEYIDETWGSSYSVLPKDPYDRAIARFWAK FVDEKVLLTAFKAYIGKGDKEQEDSIEEFMLASGKSGGGAEGEGVFRRGKDRVCGHCRVLHLVLAWSVGGSCGSRSVDKREVPWNVRMDG

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G29420		GST25, ATGSTU7	GLUTATHIONE S-TRANSFERASE 25, ...		Lus10016470 [exp]	0	1
AT3G29635			HXXXD-type acyl-transferase fa...		Lus10005362 [exp]	4.1	0.9531
AT2G29420		GST25, ATGSTU7	GLUTATHIONE S-TRANSFERASE 25, ...		Lus10016469 [exp]	4.9	0.9522
					Lus10026081 [exp]	6.7	0.9509
AT4G15480		UGT84A1	UDP-Glycosyltransferase superf...		Lus10019808 [exp]	6.7	0.9377
AT3G14690		CYP72A15	"cytochrome P450, family 72, s...		Lus10026178 [exp]	8.7	0.9458
AT5G17000			Zinc-binding dehydrogenase fam...		Lus10004379 [exp]	11.0	0.9412
AT3G09270		ATGSTU8	glutathione S-transferase TAU ...		Lus10021102 [exp]	11.6	0.9450
AT5G59590		UGT76E2	UDP-glucosyl transferase 76E2 ...		Lus10016460 [exp]	15.0	0.9168
AT2G30140			UDP-Glycosyltransferase superf...		Lus10042261 [exp]	15.4	0.9405
AT4G37370		CYP81D8	"cytochrome P450, family 81, s...		Lus10020437 [exp]	16.4	0.9249

Compare expression of checked genes

Lus10016470 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.