Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G55280 503 / 7e-178 ATFTSZ1-1, CPFTSZ, FTSZ1-1 CHLOROPLAST FTSZ, ARABIDOPSIS THALIANA HOMOLOG OF BACTERIAL CYTOKINESIS Z-RING PROTEIN FTSZ 1-1, homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 (.1) AT3G52750 307 / 1e-100 FTSZ2-2 Tubulin/FtsZ family protein (.1) AT2G36250 303 / 4e-99 ATFTSZ2-1, FTSZ2-1 Tubulin/FtsZ family protein (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10002442 [exp] 607 / 0 AT5G55280 479 / 6e-169 CHLOROPLAST FTSZ, ARABIDOPSIS THALIANA HOMOLOG OF BACTERIAL CYTOKINESIS Z-RING PROTEIN FTSZ 1-1, homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 (.1) Lus10014196 [exp] 307 / 1e-100 AT3G52750 569 / 0.0 Tubulin/FtsZ family protein (.1) Lus10017047 [exp] 303 / 2e-98 AT2G36250 597 / 0.0 Tubulin/FtsZ family protein (.1.2) Lus10021367 [exp] 302 / 2e-98 AT3G52750 607 / 0.0 Tubulin/FtsZ family protein (.1) Lus10022718 [exp] 225 / 9e-71 AT3G52750 381 / 3e-131 Tubulin/FtsZ family protein (.1) Lus10035091 [exp] 56 / 5e-08 AT1G75010 559 / 0.0 ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, GTP binding (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G359500 [exp] 515 / 0 AT5G55280 547 / 0.0 CHLOROPLAST FTSZ, ARABIDOPSIS THALIANA HOMOLOG OF BACTERIAL CYTOKINESIS Z-RING PROTEIN FTSZ 1-1, homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 (.1) Potri.006G083100 [exp] 303 / 6e-99 AT3G52750 647 / 0.0 Tubulin/FtsZ family protein (.1) Potri.004G203100 [exp] 300 / 1e-97 AT2G36250 613 / 0.0 Tubulin/FtsZ family protein (.1.2) Potri.009G164100 [exp] 286 / 2e-92 AT2G36250 524 / 0.0 Tubulin/FtsZ family protein (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0566 [flax] [poplar] Tubulin PF00091 [flax] [poplar] Tubulin Tubulin/FtsZ family, GTPase domain CL0442 [flax] [poplar] Tubulin_C PF12327 [flax] [poplar] FtsZ_C FtsZ family, C-terminal domain
Representative CDS sequence Show only first row Show all	>Lus10016579 pacid=23144013 polypeptide=Lus10016579 locus=Lus10016579.g ID=Lus10016579.BGIv1.0 annot-version=v1.0 ATGGCGACATTTCAGTTCCAGCTTCAGCTGGCAAAACCCCATGCATCTTCTTCTTCATCATTCTCTTCCTTGCTGTCTCCTCATAGGCAGAGGACTAATC ATACGTACAAGCCACGGAGATATCACAAGGTCGTAAGCTGCTGTTCTGACCCAATTGAGAATGCCAAAATTAAGGTAATTGGTGTTGGCGGCGGCGGCAA CAATGCTGTTAATCGCATGATTCTCAGCGGCTTGCAGGGTGTCAATTTTTATGCTATAAACACAGATTCCCAAGCACTGTTGCAATCTGAAGCTCAGAAC CCTCTACGAATCGGAGAGAAGTTGACGCGTGGATTAGGTACTGGTGGAAATCCTGTGTTGGGAGAGCAGGCTGCAGAGGAATCGAGAGAAGCTATAGCTG AATCTCTAAAGGGTTCGGATCTTGTGTTCATAACAGCTGGTATGGGTGGTGGCACAGGATCTGGAGCTGCTCCTGTGGTGGCTCAGATATCAAAGGAGGC AGGTTATCTTACTGTTGGTGTAGTTACGTATCCATTTAGCTTTGAAGGACGGAAAAGATCTCTGCAGGCAAGTGAAGCAGTAGCAGCTCTTGAGAGATTG CAGGAAAATGTTGATACTCTCATAGTGATACCCAATGACCGCTTGCTTGACATAGCCGATGAGCAGACGGGACTTCAAGATGCTTTCCTTCTTGCTGATG ATGTTTTACGCCAAGGTGTTCAAGGGATTTCTGATATTATTACTGTACCTGGGTTGGTTAATGTTGATTTTGCTGATGTAAAGGCAGTGATGAAGAATTC AGGGACGGCAATGCTTGGAGTTGGGAGATCGTCGGGGAAAAACCGAGCTGAAGAAGCAGCTGAGCAAGCAACTTTTGCACCCCTCTTGGGATCATCCATC CAATCAGCTACAGGAGTTGTGTACAACATAACTGGTGGGAAGGACATAACCCTACAAGAAGTGAACAGAGTTTCCCAGGTTGTCACAAGTTTGGCAGATT CATCTGCAAACATAATATTTGGTGCAGTGGTGGATGAACGTTTCAATGGACAGATTCACGTCACCATAATTGCAACTGGTTTCTCACAGTCATTTCAGAA GACACTTCTAGCTGATCCAAAGGCAATTAAACTGCTTGACAAGGTGAAAGAGACCCAAGAAACCTCCTCTTCCCTTCCTCTCAAAGCCGGTGGTTCAACA CCTTCTCCACGAAAGCTCTTCTTTTGA
AA sequence Show only first row Show all	>Lus10016579 pacid=23144013 polypeptide=Lus10016579 locus=Lus10016579.g ID=Lus10016579.BGIv1.0 annot-version=v1.0 MATFQFQLQLAKPHASSSSSFSSLLSPHRQRTNHTYKPRRYHKVVSCCSDPIENAKIKVIGVGGGGNNAVNRMILSGLQGVNFYAINTDSQALLQSEAQN PLRIGEKLTRGLGTGGNPVLGEQAAEESREAIAESLKGSDLVFITAGMGGGTGSGAAPVVAQISKEAGYLTVGVVTYPFSFEGRKRSLQASEAVAALERL QENVDTLIVIPNDRLLDIADEQTGLQDAFLLADDVLRQGVQGISDIITVPGLVNVDFADVKAVMKNSGTAMLGVGRSSGKNRAEEAAEQATFAPLLGSSI QSATGVVYNITGGKDITLQEVNRVSQVVTSLADSSANIIFGAVVDERFNGQIHVTIIATGFSQSFQKTLLADPKAIKLLDKVKETQETSSSLPLKAGGST PSPRKLFF

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G55280		ATFTSZ1-1, CPFT...	CHLOROPLAST FTSZ, ARABIDOPSIS ...		Lus10016579 [exp]	0	1
AT5G55280		ATFTSZ1-1, CPFT...	CHLOROPLAST FTSZ, ARABIDOPSIS ...		Lus10002442 [exp]	1.0	0.9584
AT4G03210		XTH9, EXGT-A6, ...	xyloglucan endotransglucosylas...		Lus10031586 [exp]	1.4	0.9305
AT3G10140		RECA3	RECA homolog 3 (.1)		Lus10018037 [exp]	3.5	0.9150
AT5G20060			alpha/beta-Hydrolases superfam...		Lus10019438 [exp]	4.7	0.8980
AT3G18110		EMB1270	embryo defective 1270, Pentatr...		Lus10039148 [exp]	4.9	0.9049
AT1G14590			Nucleotide-diphospho-sugar tra...		Lus10019139 [exp]	5.0	0.9153
AT3G02710			ARM repeat superfamily protein...		Lus10010958 [exp]	7.1	0.8935
AT5G43960			Nuclear transport factor 2 (NT...		Lus10023722 [exp]	7.3	0.9208
AT1G66345			Pentatricopeptide repeat (PPR)...		Lus10002294 [exp]	8.3	0.8576
AT3G15130			Tetratricopeptide repeat (TPR)...		Lus10030124 [exp]	9.2	0.8526

Compare expression of checked genes

Lus10016579 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.