Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G13750 2011 / 0 EMB2597, NOV NO VEIN, EMBRYO DEFECTIVE 2597, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein (.1) AT1G08300 240 / 5e-66 NVL no vein-like (.1) AT3G48770 134 / 8e-31 DNA binding;ATP binding (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10037831 [exp] 712 / 0 AT4G13750 149 / 7e-39 NO VEIN, EMBRYO DEFECTIVE 2597, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein (.1) Lus10022572 [exp] 521 / 1e-168 AT4G13750 95 / 2e-21 NO VEIN, EMBRYO DEFECTIVE 2597, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein (.1) Lus10017105 [exp] 360 / 1e-107 AT1G04910 767 / 0.0 O-fucosyltransferase family protein (.1) Lus10004567 [exp] 154 / 8e-37 AT3G48770 1691 / 0.0 DNA binding;ATP binding (.1) Lus10001530 [exp] 47 / 0.0004 AT5G23110 5981 / 0.0 Zinc finger, C3HC4 type (RING finger) family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G317200 [exp] 2718 / 0 AT4G13750 2097 / 0.0 NO VEIN, EMBRYO DEFECTIVE 2597, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein (.1) Potri.015G102200 [exp] 123 / 1e-27 AT3G48770 1833 / 0.0 DNA binding;ATP binding (.1) Potri.015G103100 [exp] 123 / 2e-27 AT3G48770 1796 / 0.0 DNA binding;ATP binding (.1) Potri.015G103000 [exp] 123 / 2e-27 AT3G48770 1719 / 0.0 DNA binding;ATP binding (.1) Potri.015G102700 [exp] 122 / 3e-27 AT3G48770 1842 / 0.0 DNA binding;ATP binding (.1) Potri.012G103700 [exp] 121 / 6e-27 AT3G48770 1783 / 0.0 DNA binding;ATP binding (.1) Potri.015G102401 [exp] 115 / 1e-25 AT3G48770 771 / 0.0 DNA binding;ATP binding (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10016661 pacid=23143991 polypeptide=Lus10016661 locus=Lus10016661.g ID=Lus10016661.BGIv1.0 annot-version=v1.0 ATGCAAGCTCATCCTGCGGACATGGATCCTAATTTCAACCCCCACCTGCAGAATATGTTTCTTCAAACCCTCGCCAATAATTTTCTCCAGAACTTCGCTT TCCAACAAAGCTTCGTCCCTCAGTACCCTAATTGTCCAATTCCAAATTTCGGTTTCCAGAACCACCCTCACCACCAGCCACTCCCTAATAGCTTCTCTGC TCTTCCGCCAATGTCGACGCGGACGCCGCCTCCGCCACAGACAAGCAACTCATCCGAGCAAAAGCCTGAAGACTTGACCACTATTAAGCAGACACTTCCA ACAGCCCCTCCTTTCGAGAAAGCCAAGCCGATGAAAATGAAACAAAGTAAGCAGCTGCTTGAGAAAATTGACCGGGCAACACTGAAGGCAAGGCAAGACC TTGTCGCTGCTGGGGAGGGAGTTACGACCTGGAAGGTTTCGCAGAATGTATTGTTAACTTTGCAGGTTGATTCATGGGAATCTTTAGGGTTTAGGATGCA GGAGATACCGTCTCTGCACAGGCTTATTCTTACTGAAGGGAAGGTAAATGCTTTCATCCATTGCTTTGTTGCAGTGTGGAGGATAACATCATTGTACGAC CTGCAAGTGGCAGTTTGTCAGAATGAGGGTGTTGAGCTGTTTGAAGATCTTGATTTGGGCCCTCTGCTGCAACATCCTCTTGTGTTGCATTATTTCGTCG ATTCAAATGTTACTGAAGTCTTTCAGATTACTAGGGAGGACATAATTTCTGACCTTCATGAGTTCATGGATTCTATTAAAAAGAGACAAATTAACGTTGA TGAGTTTCTAGATTTCATAGCTGAGAAACGATCTGTTGTGGATAAAGCAAAGCTTGGAGTCCGTATTCAGAACTTGGGGATCTATATTTCTTTTATACGG GAGGCAAAGAGGTCCGAAGATGAGGCAATGAAGAGATGGAAGATTGGTTTTGTAAAGACTTCTGATAATACAAGTACGAAGCAACCTTCGGTAAACCACC AGAAGAACTTGAATAACTTGGAGGAACGTTTTTCTGCTATATGTCAGCGTGTAGAATCATTTTCCTCTTCACAGAAGGTTTTTTGCGGCAAGCACATTCG CTTTGGCTCATCAAGCTCCGAGGATGAAGAAAGTGATGATTGTCTTGAGAAAAATGAAATGACGCCACATAGTCACAATGGCCATTTGAAGATAGCATCA CAAGATCTTAGTGGCTCTTTTCGTGTAAATAGTTGCCCTTATCCATCTGCAACCGAGGAGAGGTCGCGGCTGGGCTTGAAAAGTGATGTTTCACAATCTT CTCAGGCTGGTCATGGGAAAAGTATTGGACTTAGTCATAAAAGGAAACGTCTGATACAAAAAGGCGTAGTGTTTGCACCCTCTAAATTTCTTAAAGTTGA AAAGTTAAAACAAACTGATATGAATGAGGCTAGTACTTCCGTTGACGATTCTGATTTACTATCTGATAACACCATAAAAAAGTTCATTGCAACTTGGAAA GAGGCATGCAACAAATACTCTGTTGACAAGGTTCTTGATAATATGCTAAAGTTCTACAACCCAGCAGAGTATAAGACAACAACAGATTGTAAGACAATTG CTAGACGAATGAGGAGAACACGGAAGAATATTCTGCAGAGCATCAGAGCGACAATTCTGTCTCAGCCTTTCATTGGTTTGCTTAATGTTGCTGTATCTTC TATAAAACTTGGGATGTGGGATAGCATTTATGACACTTTTCAAGCGATTACCCAAGAAGATACGCAGGGATATGAAAACATCGATGTTGATGCAGAAGAA ACATACACATCTGTTGATGTTAAACTTGAAAGTATTTCAGTTGAAGACATTGTTGCAAAACTTGCCATGTACTGTGAGCTTGATCATGAGTTCTGGAGCA ACTGCAAGTCTGGCGTGAAAAATAGATTTATCTTTATGCAGAAGCTTTGCAGCTGTGAGGACTGGTTGGTTGGCCAGTTTGGGGTTATAGAATTCAACTC TCTTGGTCATGGTGAGTTCTTTGTTTTCTTGGAGAAAAATGTTTCCTTGTTGCCTGCTGAAGTGAGAAATTTCTTGGGTAATGAACCATGTGAAAGCCCT CCTCTGGACGTTCGCATTCTCCAGGACCAGCTAATTTTGTTAGTTTCACAAGCTTCAAACAATTTATGGCAAAATGAACCCATTACAAAAGAGATGATTT CTGCAATGTTTGCAAGGCAATTCCCATCGTTCAGTGCCAATGTTACTGGAGACTGTTCCAGTGAACGTTTTCTATCTACTGTGGAGAAACATAAGAGTAG TGCCATCTCCAACAGCGTGCTGTTTTCTGCAACATTGCTAGAATCACATCATGTTTGTGATCAGTTGGCTCACAGTGAAAGTAGCAGGTTGGCAACTTCT GGTAGTGTGAAGATGTCACTTTCATCTGTTACGGCTGCTATTGATGTTCTACTCCAAGCTCCTATGATGTCTGATTTAAATTTGTGGTCCCACTGGGACC TAAAGTTTGCTCAATCACTTGGCTCTCTCCAAGATTTTTTGTGGAGGGAAGTCGCTTCTAGAGAATTTATATGCCTTGTCACAAGAGAGGGAAAAGTAAT TAGACTACATCAATCTGCTACTGCTGATACATTCTTGGAGGCTGCGGTTCAAGGATCACCTTTCCAAACTGCTGTTGAATTGTTATCGTTTTTCTCATTG ACTGGTGGTGAGAAGCATGTTCCTTTGTCCCTTCTAAAATCCTATGCCTGCCACGCATTTGGTGTCATTCTGAATATTCCAACAAAGAGTGTGGATGTTC AGGGGTATGAAGATAACCAAGTGTTTGCCTTGACTGGATCTAAAGATCTTAACACTCCAGTTTCTGTTGCTTCAAGGTTTTTCCTTGACTGCATTGGCTA TTTGCCTGCAGAGTTCCGTGGTTTTGCAGCTGATGTCTTACTAACTGGGATGCAGTCTGTAGCTTTTGAAGCTTCATCAGCTATTTTGCGTGAATGCAGT GGAGCAGAACGTCTCATGCTTCATGAAATAGGGCTGTCCATTGATATATCGGAATGGGTCAAAGATCACGATACATGTGGTGTTGGTTACACTCACTTGC CCAAAATTTCTGAATCGTTGCATATGGATGTTTCCAGGTCTGAGTTGAGCACAAAACCAAGGTGCAAGCAAGATGAAACTAATGAAAAACGACTTGCTTC TTCTATGGAGTTCTCATGCGGTAATGGAGTTACTAAGTCCAGTCCTGCTGTTGATAATGCATTAGTCTCGAGTCACACAGTTGGGTCAGGACTAGATTGC AATAATGATAAGGACAAGGATGCAGCTTCTGTCATTGACTGCATTAGGAGAAGTGAATTTGGCCTAAGCCCAAATCTTTCAAGTTTGGAGAGTGATATGT TAACGAAACAGCATGCTCGTCTAGGGAGAGCACTTCACTGTCTTTCACAGGAACTGTATTCCCAAGATTCCCATTTTCTACTTGAGCTGGTTCAAAATGC TGATGACAATACATATCCAGAGAACACGGAACCAACCCTTGTGTTCATTCTTCAGGAGTCTGGCATCATTGTTTTGAACAATGAGCATGGCTTTTCCCCT GAAAACATCAGAGCTTTATGTGATGTTGGTAATTCAACCAAGAAAAGGTCTGGTGCTGGTTACATAGGGCAAAAAGGGATTGGCTTCAAATCAGTGTTTC GGGTTTCGGATGCTCCTCAGATACATTCCAATGGTTTCCATATTAAATTTGACATAAGTGTGGGACAGATTGGTTTTGTTCTACCAACAGTTGTGCCTCC TTGCAATGTTGACTTCTATAGTGGGTTGGTTTCTGGAGGCAATGATCAGTTGGACTGTAACTGCTGGAATACTTGTATTGTTCTTCCTTTCCGGTCCAAA GTATCAGCAGAAACGACAATGAGAATGTTTGTGGATCTTCATCCATCCTTGTTACTCTTTCTTCACCGCCTCAAGTGCATCATGTTCCGCAACACGCTTA ATGACTCGCTTGTCATCATGAGAAAAGAAATTGTGGGAGATGGTATAGTAAATGTTACATGGGGGGGAGATAAAATGACCTGGCTTGTAGCATCTCAGAA GCTGCAGGCTCATTCCAGTCGACCTAAAGTGCAGGCAACTGAAATTGCTATAGCATTTACTCTCAAAGAGTCGGAGAATATGTACTATACCCCTTGTTTG GAACAACAGCCAGTGTTTGCTTTCCTCCCCTTAAGAGCATATGGACTGAAATTCATTCTGCAAGGTGATTTTATACTCACATCATCTAGAGAGGAAGTGG ATAGGAACAATCCCTGGAATGAATGGTTGATGGCAAACTTTCCTTTATTATTTGTTGCTGCTGAGAAATCATTTTGTGCCCTTTCTTGTTTCAAGGAGAA ACCAGGAAAAGCTGTGACTGCTTATATGAGTTTTGTTCCACTTGTCGGAGAGGTGCATGGGTTCTTTTCTGGTCTGCCTCGGGCTATCTCTCTGGAGTTG AGGAGAACACAATGCCTCTTCCTCGAGGGAGATGCCACAAAGATGGTTTTGCCTGGCAAGGTTCTCAGAGGTTGGAATGAAGAAGCTCACATTCTTCTTC CTGAGATCTTGCTGCAAGAGCACCTTGGCATTGGATTCTTAGACCGGAACATAGTTTTGCCCGATTCACTTGCAAGTGCTTTGGGTATAACTGAATACGG ACCAGAAATTCTGATTAGATTCACTACATGCTTATGTCGCACAGGAAATGGGCTGCAGTTAATGGGTATGGGATGGTTATCCTTGTTGCTAGATGTCCTC TATCGAATGCTACCAAAATCTAATGCAGAAAATTGTCTTTTGGACAGCCTTCGAGGTCTTCCATTTGTACCTCTTTCAGATGGTACATACAGCTCCAGTG ATGCTGGTACTATTTGGTTGCATTCTGACGTTCTGAGTACAGGACTCCATGGGCCACTTGGGCTTGAGACCTTTCCAAAATTGTATGCTGAGCTAAGGAT TGTTAACCCTGGGCTCCTTTCAGCATCAGCTGCTGATGGGGCTTCTCCACATAATATTGTGAGAATGCTTCATAGAATTGGTGTCCAACCTTTGTCTGCC CATGACATCATGAAAGTGCATATTTTCAACTCTCTATCCGATTCGAGTAGAGACAGCCAATCAATGACGGACTATCTTTGTTTTCTGATGATTCACATGC AATCTAGCTGCAATATGTGTCATACTGAAAGGAAATCAATTATGTCTAAGTTGAAAAGTAACGCTTATATATTGACGAATAATGGGTATAAACGGCTAGG TGAGGCGCCAATTCATTTTAGCAGGGAATTTGGAAATCCTGTTGACGTTCGGAAATTCATTGATGTTTTGAAGATGGAGTGGAATGAAGTCGATGTTAGC TACTTGAAGCATCCGTCCATTGAGTCACTTTCTGGTGGGTTGACAAAGTGGAGGGAGTTCCTTATGGAGATTGGTGTTACAGATTTTGTTCAAGTTGTTC AAACAGAAAGGAGTATCACTGAACTATCTAGTGCAACTATCAAACAAATGCTATGCGGTGGTAAGCTGATCTCTCCAGATTATATGGCCAAAGATTGGGA ATCGAAGGAGTTGGTCCATCTGCTTTCTATTTTGTCAACAAGGGATGATGCAAAATGTTCCGAACATGTCTTAGATATTCTTGATACATTATGGGATGGG AGCTTCAGTGACAAAGTTAGTGGTTTCTGCAATGGCAATGCCTGTGATGATTTTAAACCTTTCAGATCTACCTTTATAAGCAGTCTCTGTGATTCTCAGT GGGTTGTATCGAGCATGGATAACGAGCTTCACTACCCCGAGGATCTTTTCCATGACTGTGACACTGTACGGTCAATTTTGGGTTCTTTCGCTCCATATGC TACTCCAAAGGTGAACAGTGCAGCTCTACTAGCAGATATTGGCTTTAAGACGAAAGTCGGTCTTGATGATGCCCTTAATATTGTTGGACTGTGGAAAAAG TCAAATACTCCTTTCAAGGCTAGCATATCGCAAATGTCCAGGTTTTACTCATTTATCTCGGAAGAATTGGTTTCCTCAAAGAAAAATGTTCAACAAGCAT TCCAGTCTGGAACCTTCATTTTTCTTCCCTTCAAAACAGCATCAAAGCATAACAATCTGGTGTCAGGTGTCTTTTTGCGTCCTGAAGAAGTTTATTGGGA TGATCCAACAGGGGCTTTCCATCAAGTGAAGCTCCTTCAGCAACGTAGCTCAACAACAATGCATCAAAATCCTTTGGATAAGACACTGTGCCATATTTAT CCAGGCCTTCATGACTTTTTCGTCAACCAGTGTGGTGTATGTGAAACCCCTTCTTACAGTAGCTATCTTGATATCTTGAGGCAATTATCAACTCTTGCAC CACCTTTTGCCCCTGCTAGTGCTGTCTTCAAAGTCTTTTCAAAATGGAGCAGTGGATTCAAATCTGGTTTATTAAGTTCTGCAGATCTCATTCACTTGAA AGAATGTCTCTTGAAACTTGAGTATACTATACTTCCTACTGCATCAAATAAGTGGATGTCGTTGCATACTTCTTTTGGTGTTGTGTGTTGGTGTGACAAC GCTGAGTTAAGCAAAGAGTTTAAACACCTGGACAGCATCAATTTTCTTTACTTTGGTAAGCTTAAGGACAACGAGGAGGAGATACTTCATAAGCAAGTGT CTGAATTCCTTAGAGTCTTGGGGATACCTGCACTTTCAGAGGTTATAAGTCGGCAAGCAATATACTATGGTCCAACAGACTCTAGTTTCAAAGCTTCTTT GATTCATTGGGCTCTTCCTTATGCTCAGCGCTATATGTATAGCATCTACCCCAACAATTATGCTCAACTACAGAAAAATGGATTTGAAGCTATAAAGAAG CTAAAAGTAGTTGTTGTTGAGAAGTTATTTTACAAAAATGAAATAAAACGTTGTGGGACCTCATCTCAGAACAGATGCGAATGTAGTTGTCTTCTGCAGG ATGAAACTCTGTATTCCACGGTGACGACGGATGCACATGCATTATTTCTGGAGCTTTCCCGTTTATTCCTCAATGGTACTCCAGATTTACACCTGGCCAA TTTTCTTCACATGATCACAACCATGGCTGAATCTGGCTCCACAGTGGATCAAACAGAGTTCTTCATTCTGAACTGCCAGAAGATACCAAAGTTGCCAGAG GAAGAAGTTATGTGGTCTCTCTACCCTCCACCTTCAAGAGCAAACTGTGAATCCCTGCAAACAGATGTTTCTATGGCAACAGATGAGGAGGAGAGGCTTA TAAAATCCAACACAGTCTCTTCAACTGTAGAAAATGGGTCCAAATCATTGAAGTACCAGATGAAAGCTGGGTTCAGATCGAATTGGCCTCCTGCAGATTG GAAGACAGCACCTGGTTATAGTCCTCATGCAGCAGGTAACAGCAGAAATAAAACGCTGATCATTGAGAAGGATGCTGACATGACACTGACAGAAGGAGAG GTAGCTATCATTAGCGATTGCGAATGGACCATCAGAGATGATCCAGAGACATCAACTTCTCCGGGCTGTGAACCTGTGAATGACTATCTCAGTCTTGTGT ATAATCAAACGGGTGGCGTGGATGGAACAGTTAACCCCGCACACTATGAGGTGATGCCAGATCAAGCTCAGCGGCTCTCGTTTGGATTTGGCAGGAGAGA TCGGTTTGCTATAACTGGTGGTTCCAGTGACCAAGCGATGGAAACAGGAAGATCGGGGGAGCAGATTGCTTTCAGATACTTGACGGGGAAATATGGAAAA GAAGCAGTGAGGTGGGTTAATGAAGCACAGGAGACTGGGTTACCCTACGACATGCTGGTGAAAGAGCCTAAGCATGGTGAGCAACAGCAGTATATTGAAG TGAAAGCTACACAGTCTGCACGAAAAGACTTTTTCTTCATATCAGCAAGAGAATGGCAATTTGCGGCTGAGAAAGGTGATGCTTATACCATTCTTCATTT ACTTTTAGGGAATCACAATGCGATGATCACTTTATTTAAGAACCCAGTGAAGCAGTGCCAGCAAGGAAAGCTGCGCTTGGTGGCTGTGATGCCAACCCAG CAGAGTGGAGGTGAGCTTTTCCCACTGCTATAG
AA sequence Show only first row Show all	>Lus10016661 pacid=23143991 polypeptide=Lus10016661 locus=Lus10016661.g ID=Lus10016661.BGIv1.0 annot-version=v1.0 MQAHPADMDPNFNPHLQNMFLQTLANNFLQNFAFQQSFVPQYPNCPIPNFGFQNHPHHQPLPNSFSALPPMSTRTPPPPQTSNSSEQKPEDLTTIKQTLP TAPPFEKAKPMKMKQSKQLLEKIDRATLKARQDLVAAGEGVTTWKVSQNVLLTLQVDSWESLGFRMQEIPSLHRLILTEGKVNAFIHCFVAVWRITSLYD LQVAVCQNEGVELFEDLDLGPLLQHPLVLHYFVDSNVTEVFQITREDIISDLHEFMDSIKKRQINVDEFLDFIAEKRSVVDKAKLGVRIQNLGIYISFIR EAKRSEDEAMKRWKIGFVKTSDNTSTKQPSVNHQKNLNNLEERFSAICQRVESFSSSQKVFCGKHIRFGSSSSEDEESDDCLEKNEMTPHSHNGHLKIAS QDLSGSFRVNSCPYPSATEERSRLGLKSDVSQSSQAGHGKSIGLSHKRKRLIQKGVVFAPSKFLKVEKLKQTDMNEASTSVDDSDLLSDNTIKKFIATWK EACNKYSVDKVLDNMLKFYNPAEYKTTTDCKTIARRMRRTRKNILQSIRATILSQPFIGLLNVAVSSIKLGMWDSIYDTFQAITQEDTQGYENIDVDAEE TYTSVDVKLESISVEDIVAKLAMYCELDHEFWSNCKSGVKNRFIFMQKLCSCEDWLVGQFGVIEFNSLGHGEFFVFLEKNVSLLPAEVRNFLGNEPCESP PLDVRILQDQLILLVSQASNNLWQNEPITKEMISAMFARQFPSFSANVTGDCSSERFLSTVEKHKSSAISNSVLFSATLLESHHVCDQLAHSESSRLATS GSVKMSLSSVTAAIDVLLQAPMMSDLNLWSHWDLKFAQSLGSLQDFLWREVASREFICLVTREGKVIRLHQSATADTFLEAAVQGSPFQTAVELLSFFSL TGGEKHVPLSLLKSYACHAFGVILNIPTKSVDVQGYEDNQVFALTGSKDLNTPVSVASRFFLDCIGYLPAEFRGFAADVLLTGMQSVAFEASSAILRECS GAERLMLHEIGLSIDISEWVKDHDTCGVGYTHLPKISESLHMDVSRSELSTKPRCKQDETNEKRLASSMEFSCGNGVTKSSPAVDNALVSSHTVGSGLDC NNDKDKDAASVIDCIRRSEFGLSPNLSSLESDMLTKQHARLGRALHCLSQELYSQDSHFLLELVQNADDNTYPENTEPTLVFILQESGIIVLNNEHGFSP ENIRALCDVGNSTKKRSGAGYIGQKGIGFKSVFRVSDAPQIHSNGFHIKFDISVGQIGFVLPTVVPPCNVDFYSGLVSGGNDQLDCNCWNTCIVLPFRSK VSAETTMRMFVDLHPSLLLFLHRLKCIMFRNTLNDSLVIMRKEIVGDGIVNVTWGGDKMTWLVASQKLQAHSSRPKVQATEIAIAFTLKESENMYYTPCL EQQPVFAFLPLRAYGLKFILQGDFILTSSREEVDRNNPWNEWLMANFPLLFVAAEKSFCALSCFKEKPGKAVTAYMSFVPLVGEVHGFFSGLPRAISLEL RRTQCLFLEGDATKMVLPGKVLRGWNEEAHILLPEILLQEHLGIGFLDRNIVLPDSLASALGITEYGPEILIRFTTCLCRTGNGLQLMGMGWLSLLLDVL YRMLPKSNAENCLLDSLRGLPFVPLSDGTYSSSDAGTIWLHSDVLSTGLHGPLGLETFPKLYAELRIVNPGLLSASAADGASPHNIVRMLHRIGVQPLSA HDIMKVHIFNSLSDSSRDSQSMTDYLCFLMIHMQSSCNMCHTERKSIMSKLKSNAYILTNNGYKRLGEAPIHFSREFGNPVDVRKFIDVLKMEWNEVDVS YLKHPSIESLSGGLTKWREFLMEIGVTDFVQVVQTERSITELSSATIKQMLCGGKLISPDYMAKDWESKELVHLLSILSTRDDAKCSEHVLDILDTLWDG SFSDKVSGFCNGNACDDFKPFRSTFISSLCDSQWVVSSMDNELHYPEDLFHDCDTVRSILGSFAPYATPKVNSAALLADIGFKTKVGLDDALNIVGLWKK SNTPFKASISQMSRFYSFISEELVSSKKNVQQAFQSGTFIFLPFKTASKHNNLVSGVFLRPEEVYWDDPTGAFHQVKLLQQRSSTTMHQNPLDKTLCHIY PGLHDFFVNQCGVCETPSYSSYLDILRQLSTLAPPFAPASAVFKVFSKWSSGFKSGLLSSADLIHLKECLLKLEYTILPTASNKWMSLHTSFGVVCWCDN AELSKEFKHLDSINFLYFGKLKDNEEEILHKQVSEFLRVLGIPALSEVISRQAIYYGPTDSSFKASLIHWALPYAQRYMYSIYPNNYAQLQKNGFEAIKK LKVVVVEKLFYKNEIKRCGTSSQNRCECSCLLQDETLYSTVTTDAHALFLELSRLFLNGTPDLHLANFLHMITTMAESGSTVDQTEFFILNCQKIPKLPE EEVMWSLYPPPSRANCESLQTDVSMATDEEERLIKSNTVSSTVENGSKSLKYQMKAGFRSNWPPADWKTAPGYSPHAAGNSRNKTLIIEKDADMTLTEGE VAIISDCEWTIRDDPETSTSPGCEPVNDYLSLVYNQTGGVDGTVNPAHYEVMPDQAQRLSFGFGRRDRFAITGGSSDQAMETGRSGEQIAFRYLTGKYGK EAVRWVNEAQETGLPYDMLVKEPKHGEQQQYIEVKATQSARKDFFFISAREWQFAAEKGDAYTILHLLLGNHNAMITLFKNPVKQCQQGKLRLVAVMPTQ QSGGELFPLL

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G13750		EMB2597, NOV	NO VEIN, EMBRYO DEFECTIVE 2597...		Lus10016661 [exp]	0	1
AT5G58410			HEAT/U-box domain-containing p...		Lus10026420 [exp]	3.9	0.9048
AT5G37590			Tetratricopeptide repeat (TPR)...		Lus10020811 [exp]	4.7	0.8825
					Lus10000409 [exp]	6.3	0.8884
AT3G48470		EMB2423	embryo defective 2423 (.1)		Lus10001101 [exp]	9.6	0.8952
AT5G36930			Disease resistance protein (TI...		Lus10023272 [exp]	10.2	0.8752
AT2G28290		CHR3, SYD	SPLAYED, CHROMATIN REMODELING ...		Lus10012798 [exp]	12.8	0.8981
AT1G79190			ARM repeat superfamily protein...		Lus10016753 [exp]	16.7	0.8868
AT1G02080			transcription regulators (.1.2...		Lus10028176 [exp]	18.4	0.8965
AT4G27010		EMB2788	EMBRYO DEFECTIVE 2788, unknown...		Lus10012535 [exp]	19.0	0.8822
AT3G04490			unknown protein		Lus10022024 [exp]	20.5	0.8668

Compare expression of checked genes

Lus10016661 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.