Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G48850 59 / 2e-10 PHT3;2 phosphate transporter 3;2 (.1) AT2G17270 57 / 5e-10 PHT3;3 phosphate transporter 3;3 (.1) AT5G14040 57 / 6e-10 PHT3;1 phosphate transporter 3;1 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10035975 [exp] 77 / 1e-27 AT2G17270 398 / 7e-137 phosphate transporter 3;3 (.1) Lus10041519 [exp] 61 / 3e-11 AT5G14040 586 / 0.0 phosphate transporter 3;1 (.1) Lus10012574 [exp] 61 / 3e-11 AT5G14040 580 / 0.0 phosphate transporter 3;1 (.1) Lus10026554 [exp] 60 / 3e-10 AT2G17270 472 / 8e-169 phosphate transporter 3;3 (.1) Lus10036014 [exp] 56 / 2e-09 AT5G14040 572 / 0.0 phosphate transporter 3;1 (.1) Lus10016720 [exp] 56 / 2e-09 AT5G14040 568 / 0.0 phosphate transporter 3;1 (.1) Lus10013839 [exp] 60 / 9e-09 AT2G17270 469 / 2e-167 phosphate transporter 3;3 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.004G207200 [exp] 76 / 2e-16 AT2G17270 479 / 3e-172 phosphate transporter 3;3 (.1) Potri.005G098800 [exp] 62 / 7e-12 AT2G17270 447 / 2e-159 phosphate transporter 3;3 (.1) Potri.015G104400 [exp] 57 / 8e-10 AT5G14040 489 / 2e-174 phosphate transporter 3;1 (.1) Potri.001G322300 [exp] 56 / 1e-09 AT5G14040 533 / 0.0 phosphate transporter 3;1 (.1) Potri.012G105100 [exp] 56 / 2e-09 AT5G14040 499 / 4e-178 phosphate transporter 3;1 (.1) Potri.017G060800 [exp] 56 / 2e-09 AT5G14040 542 / 0.0 phosphate transporter 3;1 (.1) Potri.009G168550 [exp] 44 / 2e-06 AT2G17270 49 / 2e-08 phosphate transporter 3;3 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00153 [flax] [poplar] Mito_carr Mitochondrial carrier protein
Representative CDS sequence Show only first row Show all	>Lus10016686 pacid=23149053 polypeptide=Lus10016686 locus=Lus10016686.g ID=Lus10016686.BGIv1.0 annot-version=v1.0 ATGGTGGGCGACCATAATGGAATAGGGAGTATTGTTGTTGCAGGAAAGGAGGAACGTAAGTACAAAGCAGTCGCAACAGTGGAAGGCATCGATTATTATG GCCTCTGCATTTTGGGTGGAATTCTTAGTGCTGGCATTACCCATCTACGCATCACTCCTCTTGATGTTGTCAAGGTCAACATGCAGGCCATCAAGGTGAA GGTTCAAGGCCAGCCTAGCTTCGCCAAGGGACTGCATGACGGATTCCCAAAGCTTTATGCATCCGACGGCCTATTGGGGTTCTACAGAGTTGTTGTTGAT GAAAGCAAGGAAGGAGGAATGCTCGAAAGGTTGGCAGCTGGGGATAACATGTATGGCTGGATACGCAGCTGGGGTCTGTGGGGAGTCTCGTGTCTAATCC AGCCGACAATCTTGGTAATCCTCGTTGGACCAGCCGTCACTCTGCAGTGGTTGTTGTTCGACACTATTAAAGTCATCTCTGGACTGCCAACCAGTGGAGA GGTCAAAACTGATGCTCGCTAG
AA sequence Show only first row Show all	>Lus10016686 pacid=23149053 polypeptide=Lus10016686 locus=Lus10016686.g ID=Lus10016686.BGIv1.0 annot-version=v1.0 MVGDHNGIGSIVVAGKEERKYKAVATVEGIDYYGLCILGGILSAGITHLRITPLDVVKVNMQAIKVKVQGQPSFAKGLHDGFPKLYASDGLLGFYRVVVD ESKEGGMLERLAAGDNMYGWIRSWGLWGVSCLIQPTILVILVGPAVTLQWLLFDTIKVISGLPTSGEVKTDAR

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G17270		PHT3;3	phosphate transporter 3;3 (.1)		Lus10016686 [exp]	0	1
AT2G01480			O-fucosyltransferase family pr...		Lus10003715 [exp]	8.1	0.7240
AT1G76890	Trihelix	AT-GT2, GT2	Duplicated homeodomain-like su...		Lus10009184 [exp]	18.9	0.7162
AT5G63810		BGAL10	beta-galactosidase 10 (.1)		Lus10022645 [exp]	30.9	0.6864
AT4G14750		IQD19	IQ-domain 19 (.1)		Lus10039367 [exp]	33.5	0.6635
AT3G54920		PMR6	powdery mildew resistant 6, Pe...		Lus10037945 [exp]	38.7	0.6653
					Lus10022054 [exp]	73.4	0.5731
AT3G61610			Galactose mutarotase-like supe...		Lus10010131 [exp]	75.7	0.6381
AT5G45380		ATDUR3	DEGRADATION OF UREA 3, solute:...		Lus10000112 [exp]	88.9	0.6134
AT4G24140		BDG3	alpha/beta-Hydrolases superfam...		Lus10033234 [exp]	91.6	0.6201
					Lus10042511 [exp]	93.0	0.6253

Compare expression of checked genes

Lus10016686 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.