Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10037765 [exp] 278 / 2e-96 ND /
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10016903 pacid=23179088 polypeptide=Lus10016903 locus=Lus10016903.g ID=Lus10016903.BGIv1.0 annot-version=v1.0 ATGGTGGGAGCAAGAACAACGAAGACGAGCTTTTCGCTGGAGGAGTATGAAGTTTTCCTCGAGAATCCGTACATGTCAAAATTCAGCATCCCACAGCTTA ATCAGATTGAGGTGTTTAGTGTGATTAGCACGATTGATTTGGCGAAGCCGCACCGCTCGACACTCAAAGACGACGATGATTACGGCGGCGCGTACATTCA GCCCGGCAATTTTTCACTGTCGTCCGGCCGAGTGAAGCGAGATCTCGAAGATCTCAACTGGCAGGAATGCTATATTCACACCATGGAGACGGCCGGTCCG GAGAAGAACCGAGTTCAGAACGTATCTGTCCCGAAGGATCTCCTGGCATCGATGGCGTCGCCGATCGCCCGCCGGAGCAGGAGTCAGAAGAGGAAGAAAA GATGTTTCGGGAATGCCGTCGACGAAGATTCCGCCGTCGTCGCCGGCGGTGATTCCTCCCTTGGTGTACAAGGAGCTGCTGACGCCACTACTGCTGCTGC AGTAAAAGCAGTAGCAGACGCGGGGTGTACTTCTCTGTACGTGGACACGTATCACTGGGGTCTATGA
AA sequence Show only first row Show all	>Lus10016903 pacid=23179088 polypeptide=Lus10016903 locus=Lus10016903.g ID=Lus10016903.BGIv1.0 annot-version=v1.0 MVGARTTKTSFSLEEYEVFLENPYMSKFSIPQLNQIEVFSVISTIDLAKPHRSTLKDDDDYGGAYIQPGNFSLSSGRVKRDLEDLNWQECYIHTMETAGP EKNRVQNVSVPKDLLASMASPIARRSRSQKRKKRCFGNAVDEDSAVVAGGDSSLGVQGAADATTAAAVKAVADAGCTSLYVDTYHWGL

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10016903 [exp]	0	1
AT2G04480			unknown protein		Lus10032584 [exp]	1.0	0.9643
AT4G18760		AtRLP51	receptor like protein 51 (.1)		Lus10007294 [exp]	2.4	0.9454
AT3G49750		AtRLP44	receptor like protein 44 (.1)		Lus10011561 [exp]	3.5	0.9574
AT1G05420	OFP	ATOFP12, OFP12	ARABIDOPSIS THALIANA OVATE FAM...		Lus10014677 [exp]	7.5	0.9490
					Lus10040587 [exp]	10.0	0.9325
AT2G01610			Plant invertase/pectin methyle...		Lus10038645 [exp]	10.2	0.9284
AT3G60890		ZPR2	LITTLE ZIPPER 2, protein bindi...		Lus10028902 [exp]	10.5	0.9463
AT4G39490		CYP96A10	"cytochrome P450, family 96, s...		Lus10015306 [exp]	10.9	0.8474
AT5G23400			Leucine-rich repeat (LRR) fami...		Lus10013454 [exp]	11.7	0.9489
AT1G46480	HD	WOX4	WUSCHEL related homeobox 4 (.1...		Lus10024808 [exp]	12.4	0.9266

Compare expression of checked genes

Lus10016903 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.