Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G36250 581 / 0 ATFTSZ2-1, FTSZ2-1 Tubulin/FtsZ family protein (.1.2) AT3G52750 580 / 0 FTSZ2-2 Tubulin/FtsZ family protein (.1) AT5G55280 324 / 1e-106 ATFTSZ1-1, CPFTSZ, FTSZ1-1 CHLOROPLAST FTSZ, ARABIDOPSIS THALIANA HOMOLOG OF BACTERIAL CYTOKINESIS Z-RING PROTEIN FTSZ 1-1, homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 (.1) AT1G75010 42 / 0.0008 ARC3 ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, GTP binding (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10021367 [exp] 889 / 0 AT3G52750 607 / 0.0 Tubulin/FtsZ family protein (.1) Lus10014196 [exp] 587 / 0 AT3G52750 569 / 0.0 Tubulin/FtsZ family protein (.1) Lus10022718 [exp] 385 / 3e-132 AT3G52750 381 / 3e-131 Tubulin/FtsZ family protein (.1) Lus10016579 [exp] 320 / 4e-105 AT5G55280 535 / 0.0 CHLOROPLAST FTSZ, ARABIDOPSIS THALIANA HOMOLOG OF BACTERIAL CYTOKINESIS Z-RING PROTEIN FTSZ 1-1, homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 (.1) Lus10002442 [exp] 273 / 2e-87 AT5G55280 479 / 6e-169 CHLOROPLAST FTSZ, ARABIDOPSIS THALIANA HOMOLOG OF BACTERIAL CYTOKINESIS Z-RING PROTEIN FTSZ 1-1, homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 (.1) Lus10035091 [exp] 69 / 4e-12 AT1G75010 559 / 0.0 ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, GTP binding (.1) Lus10022719 [exp] 58 / 4e-10 ND 35 / 3e-06 Lus10031930 [exp] 62 / 7e-10 AT1G75010 549 / 0.0 ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3, GTP binding (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.006G083100 [exp] 606 / 0 AT3G52750 647 / 0.0 Tubulin/FtsZ family protein (.1) Potri.004G203100 [exp] 577 / 0 AT2G36250 613 / 0.0 Tubulin/FtsZ family protein (.1.2) Potri.009G164100 [exp] 514 / 1e-180 AT2G36250 524 / 0.0 Tubulin/FtsZ family protein (.1.2) Potri.001G359500 [exp] 325 / 2e-107 AT5G55280 547 / 0.0 CHLOROPLAST FTSZ, ARABIDOPSIS THALIANA HOMOLOG OF BACTERIAL CYTOKINESIS Z-RING PROTEIN FTSZ 1-1, homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0566 [flax] [poplar] Tubulin PF00091 [flax] [poplar] Tubulin Tubulin/FtsZ family, GTPase domain CL0442 [flax] [poplar] Tubulin_C PF12327 [flax] [poplar] FtsZ_C FtsZ family, C-terminal domain
Representative CDS sequence Show only first row Show all	>Lus10017047 pacid=23172932 polypeptide=Lus10017047 locus=Lus10017047.g ID=Lus10017047.BGIv1.0 annot-version=v1.0 ATGCCTTGCGTTTCCCCATACTGTACGCCTTCTGAGACGAGAAACATGGCGGGAATGCTGACGGTTCTTGGAGGTAGAACATCCATTGAAAATCACTTGC ACTTGGGAAGAGCCAACAGCTTCCTTAAGCTTTCTGACGAAATGAATAGGTTCCTCGGTGTGAGCCAGAAGTTGAATTACCCTTTCGTCAGATGCTCATC AAACTCTCACAGGCTCAGTCCTTATCACGGGAAAGAAACATTTCTGGATCTGCATCCGGAAGTGTCGTTGCTCAGAGGTGAAGGTAACGATGTGGTTTCT TCCCCAAGGAGGAAGGATACACTACCGTGTGGGGATATGACTGATGATTCGTTGGACTACCAGTCCAGCTCGAGTGATTATGTTGGGGCTAAGATCAAAG TTGTTGGTGTTGGAGGTGGTGGGTCAAATGCAGCACAACGCATGATTGAGAGCTCAATGAAAGGAGTGGAGTTCTGGATTGTCAATACCGATATTCAAGC AATTAGGATCTCTCCTTTGGATCCAGAGAATCGGTTGCAGATTGGTAAGGAACTAACTAAAGGTCTGGGAGCGGGAGGTAAACCAGAGATTGGAACTAAA GCAGCTAATGAGAGCAAAGAGTCTATAGAAGCAGCACTTTTTGGTGCAGACATGGTTTTTGTCACGGCTGGAATGGGTGGAGGAACTGGAACTGGTGGTG CTCCTGTGATCGCAAGTATTGCTAAAGAAATGGGCATCCTGACAGTTGGCATAGTGACAACCCCCTTTTCGTTTGAGGGACGTAGGAGAACTATTCAGGC ACTTGAAGGAACTGCAGCGTTAAGAGAAAACGTGGACACACTGATTGTTATTCCAAATGACAAGTTATTGACGGCTGTTAACAAGTGTACTCCAGTAACT GAAGCATTTAACCTTGCTGATGATATTCTGCGGCAGGGAGTTCGTGGTATCTCTGATATCATTACGATTCCAGGACTTGTCAATGTAGATTTTGCTGATG TCCGTTCAATAATGACAGATGCTGGCTCTTCACTTTTGGGGATAGGAACTGCAACAGGTCAAACAAGGGCCAGAGACGCTGCCTTAAACGCAATTCAATC GCCCCTGTTAGACATTGGCATAGAGCGTGCAACTGGAATTGTGTGGAACATTACTGGTGGAAAGGATTTAACTTTGTTTGAGGTGAATGCTGCAGCAGAA GTGATATATGATCTTGTAGATCCAACCGCGAATCTGATATTTGGAGCTGTCATAGATCCAACATTCGAGGATCAAGTCAGCATAACTCTTATTGCTACCG GGTTCAAGCCCCAAGAAGAAACCGAAAGCAAACCTGCTCAGGCAAGCCAGGTAGCTTCGAAAGATGCAAAGGATGGAATCAACAGGCGACCATTCTCATT TACTGAAGGTGGTTCAATAAAGATTCCCGAGTTCCTCATGAAGAAAGGCCGTTCTCGTTTTCCAAGAGCATAA
AA sequence Show only first row Show all	>Lus10017047 pacid=23172932 polypeptide=Lus10017047 locus=Lus10017047.g ID=Lus10017047.BGIv1.0 annot-version=v1.0 MPCVSPYCTPSETRNMAGMLTVLGGRTSIENHLHLGRANSFLKLSDEMNRFLGVSQKLNYPFVRCSSNSHRLSPYHGKETFLDLHPEVSLLRGEGNDVVS SPRRKDTLPCGDMTDDSLDYQSSSSDYVGAKIKVVGVGGGGSNAAQRMIESSMKGVEFWIVNTDIQAIRISPLDPENRLQIGKELTKGLGAGGKPEIGTK AANESKESIEAALFGADMVFVTAGMGGGTGTGGAPVIASIAKEMGILTVGIVTTPFSFEGRRRTIQALEGTAALRENVDTLIVIPNDKLLTAVNKCTPVT EAFNLADDILRQGVRGISDIITIPGLVNVDFADVRSIMTDAGSSLLGIGTATGQTRARDAALNAIQSPLLDIGIERATGIVWNITGGKDLTLFEVNAAAE VIYDLVDPTANLIFGAVIDPTFEDQVSITLIATGFKPQEETESKPAQASQVASKDAKDGINRRPFSFTEGGSIKIPEFLMKKGRSRFPRA

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G36250		ATFTSZ2-1, FTSZ...	Tubulin/FtsZ family protein (....		Lus10017047 [exp]	0	1
AT3G07330		ATCSLC6, ATCSLC...	CELLULOSE-SYNTHASE LIKE C6, Ce...		Lus10038217 [exp]	1.7	0.8512
AT5G08280		HEMC	hydroxymethylbilane synthase (...		Lus10013439 [exp]	2.8	0.8664
AT1G31650		ATROPGEF14, ROP...	RHO guanyl-nucleotide exchange...		Lus10037260 [exp]	5.1	0.8536
AT3G57650		LPAT2	lysophosphatidyl acyltransfera...		Lus10042356 [exp]	12.6	0.8175
AT5G08280		HEMC	hydroxymethylbilane synthase (...		Lus10040987 [exp]	14.4	0.8475
AT3G52750		FTSZ2-2	Tubulin/FtsZ family protein (....		Lus10021367 [exp]	16.1	0.8385
AT3G02450			cell division protein ftsH, pu...		Lus10034097 [exp]	22.0	0.8454
AT2G14520			CBS domain-containing protein ...		Lus10030665 [exp]	22.0	0.8130
AT3G25660			Amidase family protein (.1)		Lus10020781 [exp]	26.2	0.8262
AT2G25290		Phox1	Phox1, Octicosapeptide/Phox/Be...		Lus10006196 [exp]	26.7	0.7684

Compare expression of checked genes

Lus10017047 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.