Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G48090 3232 / 0 calcium-dependent lipid-binding family protein (.1) AT4G17140 1120 / 0 pleckstrin homology (PH) domain-containing protein (.1), pleckstrin homology (PH) domain-containing protein (.2), pleckstrin homology (PH) domain-containing protein (.3) AT5G24740 64 / 3e-09 Protein of unknown function (DUF1162) (.1), Protein of unknown function (DUF1162) (.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10037833 [exp] 4097 / 0 AT1G48090 2202 / 0.0 calcium-dependent lipid-binding family protein (.1) Lus10003007 [exp] 1578 / 0 AT4G17140 3544 / 0.0 pleckstrin homology (PH) domain-containing protein (.1), pleckstrin homology (PH) domain-containing protein (.2), pleckstrin homology (PH) domain-containing protein (.3) Lus10011036 [exp] 1170 / 0 AT4G17140 3546 / 0.0 pleckstrin homology (PH) domain-containing protein (.1), pleckstrin homology (PH) domain-containing protein (.2), pleckstrin homology (PH) domain-containing protein (.3) Lus10003834 [exp] 47 / 0.0005 AT5G24740 858 / 0.0 Protein of unknown function (DUF1162) (.1), Protein of unknown function (DUF1162) (.2) Lus10027952 [exp] 47 / 0.0005 AT3G04350 754 / 0.0 Plant protein of unknown function (DUF946) (.1) Lus10000813 [exp] 46 / 0.0005 AT3G04350 761 / 0.0 Plant protein of unknown function (DUF946) (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.008G100600 [exp] 5764 / 0 AT1G48090 3782 / 0.0 calcium-dependent lipid-binding family protein (.1) Potri.001G148800 [exp] 1655 / 0 AT4G17140 3708 / 0.0 pleckstrin homology (PH) domain-containing protein (.1), pleckstrin homology (PH) domain-containing protein (.2), pleckstrin homology (PH) domain-containing protein (.3) Potri.001G455600 [exp] 65 / 1e-09 AT5G24740 3006 / 0.0 Protein of unknown function (DUF1162) (.1), Protein of unknown function (DUF1162) (.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF06101 [flax] [poplar] Vps62 Vacuolar protein sorting-associated protein 62 PF06650 [flax] [poplar] SHR-BD SHR-binding domain of vacuolar-sorting associated protein 13
Representative CDS sequence Show only first row Show all	>Lus10017107 pacid=23167465 polypeptide=Lus10017107 locus=Lus10017107.g ID=Lus10017107.BGIv1.0 annot-version=v1.0 ATGGTGCAGCCTCCCCCCGGAAACTCATGGCTAGGTTCCCTGATTGGAACTGTTATAGGAAATCTTAAGATTTCAATCAGCAATGTACATATCAGATATG AGGACTCCTCAAGTAATTCCGGGCATTCATTTTCTTGTGGAGTGACCTTGGCCAAGCTCGCTGCCGTCACTACTGATGAAGAGGGAAATGAAACATTTGA TACAAGTGGTGCTCTTGATAGATTGCGTAAGTCTTTGCAGCTTGAGAGGCTTGCTATGTATCATAACACTGATAGTCTTCCCTGGAAGATAAACAAGACA TGGGAAACTCTATCTCCCAAAGAGTGGGTAGAGATATTTGAAGATGGTATAAATGAACCAGAAGGCTGTAAAGGATCAGTGTCGAAATGGGCTGCTGGCC GTAGTTACCTCGTGTCACCTATTAATGGTGTCCTTAAGTATCATCGTCTGGGAAAACAAGAGAGAATTGATCCAGAGGTTCCATTTGAGAAGGCTTCTCT TGTCTTGACAGATGTTTCATTAACAATGACGGAGCTGCAATATCATGACTGGATAAAACTTCTGGAGGTTGTTTCGAGGTATAAGACATATGTTGAAATT TCCCATTTGAGACCCGAGGTGCCTGTATCACAAGATCCTTGTCTTTGGTGGCGATATGCTGCTCAAGCGATTCTGCAGCAGAAGAAAATGTGCTATCGAC TGTCATGGGATCGAATCCGGTATCTCTGTCAGCTTCGTCACCGTTATGTGCAGTTGTATGCTGCTTCATTGCAACAGTCGTCTGATGTACATATAAAAGA ACTTAGAGAAATCGAGAAAGATCTTGATTCTAAAGTTATTCTTCTTTGGAGGTTACTTGCACATGCCAAGGTTGAGACTGCCAAAACAAAGGAAGCTGCT GAACAGAGGAGGCTTAAAAAGAAAAGTTGGTTTTCATTGAGATGGGCCAAATATTTTCTAACTGTGTCAATCGAGCATGCGGCTGCCAGGATCATTGATA TGAATGGCATCGAGATTGTTTGTGGCCGATTTGAGCGTCTGCATGTGTCAACAAAACTTCGAAATCGTAGTATGCACTGCGATGTATTACTAAAATTTTA TGGTGTATATGCACCGGAAGGTTCACTTGCCCAGAGTGTTTCCAGTGAGCGGAAGGCGAATGCATTGTCAGCCAGTTTTGTCCACTCACCAGTGGGGGAG AATATCGACTGGAGGTTATCAGCAACCATATCCCCTTGTCATGCTACAGTTTTGATGGAAAGTCTAGATAGGGTTTTTGAATTTATGAAGAGAAGTAATG CAGTTAGCCCCACCGTTGCTCTAGATACTGCAAATGCTTTACAGATGAAAATTGAGAAAGTTACTCGTAGAGCTCAGGAGCAATTCCAAACCGCTTTGGA AGAACAATGCAGGTTTGCCTTTGACATTGATTTGGATGCTCCAAAAGTTAGAGTACCGATAAAGCCGATTGGCTCTTCCAAGTGTGATACATACTTTCTC TTGGACTTCGGTCATTTTACATTGCAGACCAAGGAAAGGCAGTCTGATGAACAGAAGCAGAGCATATATTCTCGTTTTTGCATTTCTGGAAGAGATATTG CTGCTTTTTTTACTGATTCTGAGGAGGGAAATGGAGATTTCTATTCTATGGTTGACAGGTGTGGGATGGATGTGATTGTTGATCAGATCAAAGTGCCTCA TCCGCATTACCCTTCGACAAGGATCTCTGTTCAAATTCCAAATCTTAGCATTCACTTCTCTCCAGAAAGATATCACAGACTTATGGAGTTGGTGAATATA CTAAATAATACAGTGGAGAACTGTGAGCAATCTACTGTTAACAACTTCCAGCAAATTTCTGCTTGGAATTCTGCAGATTTTGCTACTGATGCTCGAATTC TGGTTTGGAAGGGGATTGGTAATTCTGTTGCCACCTGGCAGCCATGTTTTCTTGTGTTGTCCGGATTATATCTGTATGTCATGGAATCTACAGATTCCCA AAGCCACCAGCGATACTTGAGCATGGCTGGTAGGCAGGTAGATGATGTTCCTCCATCAAATGTTGGCGGTTCTCCATTTTGTATTGCCGTGAGCTTGAGG GGAATGGACATTCAACAGGCTCCTTCAACTCTGAGTTTACTTGGGGAAACAGGTGACCTTGTTGGTGACATTGGTGGTGAATTTAATGAGCCTCACACCC CAAATTCACGTGCAGCTGATCTTGTTGTCAATGGGTCACTGGTGGAGACAAGAATCTGTATATATGCGAAGCCAGGAGATGAGGTTGACAAAAAATCTGA AGAAACATTGATTGCTGAGATTCTTGCTAGTGGAGGAAAGGTGTACCTGATTCATTCCTTAGGTGACTTAACTGCCAAAATGAAGCTTCATTCGTTAAAA ATTAAAGATGAGCTTCAAAGTTACCCATCTACAAATCCACAATACTTGGTCTGCTCTGTAGTCAATAATGAAAAGCCGCTTCCATACCCTCACACTCCTG AACCTCAAGGAAAAGATACACCGGGAGTTGCTTCTGATGACGCTGATACATTCACAGATGCATTGCCAGAGTTTTTGAATGCCTCTGATTCCATCTATTC ACCAAGATTGGAGATGTCTCATTCTGGAGATGTTTCTGACCTCTATGGCTCTTCTGAATTTGACTCTGAAGACCTGCTGCGAAGGAGGAGCATCTCAAGT GAAATATTTTATGAGGCACAGGGTGGTGACCATGTAGACTTTGTTTCTGTTGTCTTTTCTACAAGGAGTTCAGCTTCTCCTGATTATGATGGAATCGACA CCCAGATGAGTATCCGCATGTCTAAGCTAGAGTTCTTCTGCAACAGACCAACTCTTGTTGCATTAATTGGTTTTGGCATTGGTCTCAGCAGTGTGGGTTC TGTTAAGAGCAACGACGATGAAACTGAGAACCTAGATGACAAGTCAAAGGGTAAAGAAAAGAGTGAAGATACTGAACGTGTTAAAGGACTGTTGGGTTAT GGTAAAAATCGTGTTGTTTTTTATCTGAACATGAATGTTGACAATGTTACTGTAATCCTTAATAAGGAGGATGGCTCTCAGCTTGCCATGCTAATCCAAG AGAGTTTCCTGCTGGATCTCAAGGTCCACCCAAGTTCTCTTTCTATTGAAGGCACATTGGGAAACTTTAAGCTTTGTGACATGTCGCTTGGAAGGAGTCA CTGCTGGAGTTGGCTTTGTGATATCCGTAATCCAGGAATTGAATCTCTTATCAAGTTCAAATTTAATTCTTACAGCACCGAGGATGATGATTATGAAGGA TATGATTACAGCTTGAGTGGTCGACTTTCTGCTGTACGCATAGTTTTCCTGTATAGATTTGTCCGCGAGATAACTGCCTACTTTGTGCAACTTGCCACTC CACAGACAGAAGAAGCAATTAAACTGGTTGATAAAGTTGGAGGGTTTGAGTGGCTGATTCAGAAATATGAGATTGATGGGGCTACTGCACTAAAGCTAGA CCTCTCACTTGACACTCCTATTATTATTATCCCCAGAAATACGACTAACAAAGATTTCATTCAACTTGACCTGGGCCAGCTAAAGGTGACAAATGAACTC AGTTGGCATGGTAATCCAGAGAAAGATCCTTCAGCTGTTCACATGGATGTCCTTCATGCTGAGATTCTGCGCTTCAACATGTCTGTAGGAATTGATGGGT GTCTGGGCAAGCCTATCGTGCGGGATGGCCAAGGACTGGACATTTATGTCCGACGCAGCTTGCGGGATGTGTTTAGAAAAGTACCAAACTTTGCACTTGA AGTTAGGGTGGGATTCCTCCATGGTGTCATGTCAGATAAGGAATATAAAGTGATTCTGGACTGCATATCCATGAATTTAAATGAAGAACCATGTCTTCCG CCAATCTTTCGTGGCAGCAAATCTGATTCCACAGATGCAATGCAGCTGTTGGTTGATAAGGTCAACATGAATAGTCAGATGCTACTTGCACACAGTGTTA CCGTAATGGCTGTGGAAATAAATTATGCTCTGCTGGAGTTGTGTAATGGGGTCCACGAGTCACCTTTAGCTCACCTTGTTCTTGAAGGCCTTTGGGTATC ATACAGGATAACATCATTGTCTGAAACAGATCTCTATGTTACTATTCCCAAATTCTCTATCGTAGACATTCGCCCTGGGACGAAACCTGAAATGCGCTTG ATGCTTGGATCTTCAGCTGATGCCTCTAAACAAACTTCTAGTGGAAGTCTTCCATATCATCAAAATAAGGGTAGCTTTCGCAGGTTGAATTCTACTTCTG TCCTTGAGACGGATGTAATAAATTCAACCATGTTCTTGATGGATTATAGATGGCGGCCTTCCTCCCAATCATATGTAGTCCGGGTTCAGCAGCCTCGTAT CCTTGTCGTACCAGATTTTCTTCTAGCCGTGGGAGAGTTTTTTGTGCCATCACTGGGACAAATAACTGGACGGGAAGAATCGATGGATCCAAAGAAGGAT ACTATTTACAGAAGCAATTGCATAGTGCTGAGTGAACCTGTTTATAAGCAAAGTGAAGATGTGGTGCATTTGTCTCCTAATAGACGGTTAGTCGCAGATT TAAAGGGAGTTGACGAGTACATTTATGATGGCTGTGGCAAGACTATAGTCTTGAGTGAGCAGAGCAGTCTGAAAGAAACTGATACTTCACATCCTCAACC AATCATTATAGTTGGACGTGGTAAAAGGTTGCAGTTTGTTGACATCAAAATTGAGAATGGTTTCCTTCTGAGGAAATACACACACTTGAGTAATGATAGT AGCTACTCAGTCTCCATAGACGACGGCGTGGATATTTCATTGGTAGAAAACTCTTCCCCTGAAGAGAGGCTTCAGGATTATATGCGTGAAGCATCAGCCA GCACTAGCACTTTCAATTCCCAAATTGAATCAAATATTTTACCAAGCGTTACTTTTGAAGCACAGGTTGTTTCACCAGAGCTTACATTTTATGACAGCAC AAAATCTTCACTTGATGATTCTTCTTACGGTGAAAAGCTTCTGCGTGCAAAAATGGATTTGAGCTTCATGTATGCATCAAAAGAAAATGATACCTGGATC CGTGCTGCAGTGAAGGATCTTTCAGTGGAGACTGGGTCTGGACTGATGATTCTGGCCCCAGTAGATATCTCTGGAGGATATACATCTATTAAAGATAAAA CAAATATGTCGCTGATATCTACAGATGTATGCTTCCACCTTTCCTTGAGTACCGTTTCCCTTTTGCTTAACCTGCAGAATCAGGCAACCACTGCCTTGCA ATTTGGAAATGCGATTCCACTTGCTCCTTGTACCAACTTCGACCGAGTCTGGGTCTCTCCTAAAGTTCTTGTCTTGGCTGTGAATAACACATATGGACGT GTGCGAAAGCCAATTGGATTCAATCTCATTGCATTGTTATCTGAAATTCAAGGATTTGGATGTGAAGGCAGTTCTGATATAGATTCTGATTGTTCGATAT GGATGCCTGTTGCACCACCAGGATACACAGCTTTGGGTTGCGTAGCACATGTAGGACGGCAGCCACCAGCAAATCACATTGTTTATTGCCTGCGCTCTGA TCTAGTAGCATCCACTACATACCAAGAGTGCTTACTTTGTGCCCCACCACAGCAATCTTCTGCGTCTGGGTTCAGCATTTGGCGTATGGACAATGTGATT GCTTCCTTTTATGCTCATTCTTCGAGTGAATATCCTCCTAAAGACAGCAGTTGTGACCTCAGTCACCTTCTTCTGTGGAACTATGTAACTCATCCTTCAC CAAAAGAAGCCATATTGGATTCAACTGGTGATGGATATAAAGAATTAAAGAAACCTGGAAATGATGGAGAAAATTCATCGGGGTGGGATGTTCTCAGATC AGTATCAAAAGCAACAAATTGCTACATATCAACACCCAACTTTGAGAGGATTTGGTGGGATAGAGGTAGTGACGTTCGGCGACCAATCTCTATATGGAGG CCTATTGCGCGTCCTGGTTATGCTGTCTTGGGAGATTGCATTGCTGAAGGCCTGGAACCACCTGCTTTGGGCATCATTTTTAAGGCTGATAGTCCTGAAT TTTCTTCAAGACCTGTGCAATTCACTAAAGTTGCACACATTACAGGGAAAGGGATAGATGAAGTCTTTTTTTGGTACCCAATTGCTCCCCCTGGTTATGC TGCACTTGGATGCATTATCACTCGCACTGACCAACCACCAAGCACGAATTCTTTTTGCTGTCCAAGGTTGGATCTTGTTAACCAGGCAAATATCATTGAA GTGCCTGTTTCAAGATCATCAACCTCAAAGGCATCTCAGTGCTGGAGCATCTGGAGGGTAGAAAACCAGGGAGATCCTTACAACATTGTTTATGCGTTCA TACAGGCCTGCACTTTTCTTGCTCGCTCTGATCTGAAAAAGCCCTCAAGCAGATTAGCTTTCTCAATTGGTGATTCGATGAAGCCAAAGTCGCGGGATAA TGTGACAGCTGAAATAAAACTCAAATGTTTCTCTTTCACTGTGCTAGACAGCTTATGTGGAATGATGACACCTCTATTTGATTTTACGATCACTAATATA AAGCTCGCAACACACGGTCGTATGGAGTCAATGAATGCTGTGCTGATTTCATCTATTGCAGCATCAACCTTTAACACTCAATTTGAAGCGTGGGAGCCAC TTGTCGAGCCATTTGATGGGATATTCAAGTTTGAAACTTATGATACAAATGTCCACCCACCATCAAGAGTTGCCAAGAGAATACGAATTGCTGCAACTAG TATCCTGAATATAAATATCAGTGCAGCAAATCTTGAAACTTCTGTTGGGACCATTTGTTCTTGGAGGAAGCAGCTAGAACTTGATGAGAAAGCAACCAAA CTGAATGAGGATTCTGCTAGTCAAAATGCACCTGGAGAGGAAGCGGCTTATTCTGCTCTGGATGAAGATGATTTCCAGACAGTGATAGTTGAAAATAAGC TTGGTTGTGACTTGTATCTGAAAAGGGTTGAACAAAATATAGATGTTGTTGACCAATTACAACATAATGATAGTACTTCTGTCTGGGTTCCACCACCCAG ATTTTCAGATAGATTAAAGGTTGCAGATGGATCTAGGGATGCACGTTGTTATGTTGCTGTACATATACTTGAAGCAAAGGAATTGCCCGTCCTTGATGAC GGCAACAGCCACAACATGTTTTGTGCTCTACGGCTTCTTGTTGATAGTCAGGCAACAGAACAACAGAAGTTTTTTTCTCAGAGCGCCAGGACAAAATGGG TGAAGCCCATGCTCTCAACCACAGATGAACTTGATGGAGGCACTGCTAAATGGAACGAATTATTTATATTTGAAATCCCACGAAAAGGACATGCAAGATT AGAAGTGGAGGTGACAAATCTTGCCGCCAAAGCTGGAAAGGGTGAAGTTGTTGGTGCAATTTCATTGCCCATTGGACATGGATCAGCTATGTTAAAGAAG GTTGCATCAGTAAGGATGATGCATCAACCTAACAATATTCAGAATATTGTTTCTCGTCCTCTTAAAAGGAAGCATGATAAGGCTGATGACATGGAAGATT GTGGATACCTATCGGTTTCAACAACATATTTTGAAAAGAGTTTGCTAGCAAATTTTCAGAGGAGTAAAGAAACTGGAGACTCTTGCAATAGAGATACAGG TTTTTGGGTTGGGCTCAACTCTAGTGGTTCATGGGAGAGCATTCGCTCATTACTGCCATTGTCGGTTGTTCCTAAGTCATTGGAGAAAGACTTCATTGCT ATGGAAGTTATCATGAAAAATGGAAAGAAGCATGCAATTTTTAGGGGCCTGGTAACAGTGGTCAATGATTCTGACATTAAGTTGGATATTTCTGTTCTCC CCTTGTCTATGGTTGATGTTAATAATCCTTCGTTTGGATCACATAACTCGGCTGTTTTCATAGAAGAGATTTTTGAAAATCAACGTTATCATTCAACTTC TGGTTGGGGAAGCAAGTTGCATGGTTCTCAAAGCTCTGATCCAGGTCGCTGGAGCACAAGGGACTTCTCTTATTCTTCAAAGGACTTTTTTGAGCCTTCT TTACCCTCTGGATGGCAATGGGCATCGAGTTGGATCATTGATAAATCTGAAGCGGTGGATGGTGATGGCTGGGCGTATGCACCTGAATTTCACAGTTTGA AGTGGCCTCCAACTTCACGCTCAAAATCGTGTCTTGATGTGGTGCGCAGAAGGCGCTGGGTTCGAAGGCGCCAAGAAGTATGTACTGGATCTTACAATGA GAATAACGACTGTATTGTTGTAGATCCTGGATCCTCTGCTGTGTTACCGTGGAGAAATACATCCAAGGATTCTGACTACTGTCTGCAAGTTCGACCTTCT GCTGGACATTCTTCATATTCATGGGGCCAAGAAGTTAGTGTTGGTTCTTCCTATGCTTTTGCAAAAGATCAGACTTTGACTGATCAAGGGTTGCTTTCTA GACAAAGTACTTTGAAGCAGGGAAGTAAGATGCCTATTGCTTTTAAGTTAAACCAGCTTGAAAAGAAGGATGTCCTATGTTGCTGTCCTAGCAGTGGAAG CAAACAATTTTGGTTCAGTGTTGGTGCTGATGCTTCAGTTCTTACCACAGAGCTGAATACGCCTGTTTATGATTGGACGATATCCATCAATCCTCCATTG AGGTTGGAAAATCAGCTATCTTGTTCTGCTGAATTCACAATTTGGGAAAAGGCTAAAGAAGGTGGTTACACTGAGCAGCAGCATGGTATAATTTCTTCCA GGGAAGGTGTGAATATTTATTTGGCAGATATTCATAAACCCATCTATATGACATTGCTTGTTCACGGTGGTTGGGTTTTGGAAAAGCCTCCTATCCTTCT TATGGATCTTGCTTCAAGTGACCACACTTCATCATTCTGGATGGTCCATCACCAAAGTAAAAGGAGGCTGCGTGTGAACATTGAGCGAGACATGGGGGGA ACCTTTGCTGCTCCGAAAGCAATAAGGTTTTTCGTTCCATATTGGATCATAAATGATTCATCTCTGCCACTAGTATATCGAGTGGTAGAAATCGAGGGTA TAGACAACACAGATGGGGATTCGCACTCATTATCTAGAATTAAGTCCGTGAAACACACCTCGAAAACCCCGACGATGGAGAGGCGGCGCTCTAGCATGAA AAGAAATTTTGACATCATGGAGGTTATTGACGACACCAGCCCAATACCAAGTATGCTCTCACTGCAGGATCCTGCTGGTCGTAGTGGGGTAACATTATTT CCCTCGCAAAAGGATGCTTTTCTATCACGAGTGGGTCTTGCCGTTGCTGTTCGCCATTCTGAGACTTACAGTCCTGGGATTTCTCTTCATGAGCTGGAAA AAAAGGAAAGGATTGACGTGAAAGCTTTTAGTTCAGATGGATCCTACTACAAGCTCTCAGCCCTATTGAAGACCTCAGAAAGAACAAAGGTTGTTCACTT TCAGCCACACACCTTATTCATCAACAGGGTTGGTCGCAGTGTGTGTCTTCAGCAGTGTGATTCTCACTTGGTGGAATGGGTTCATCCTACAGATCCTCCA AAGCCTTTTGGATGGCAGTCCTTTGCCAGGGTTGAGATGTTGAAGCTGCGCGTTGATGGATACCAGTGGAGCATACCGTTTAGTGTTTATAATGAAGGCA CTATACGAATTTCCTTGAAAAATGATGCGCGAGATGATCAACTGCAGTTAAAGATACAAGTACGAAGTGGTACAAAGACCTCGCGATATGAAGTTATATT CCGTCCAGACTCATCATCTAGTCCTTACAGGATCGAAAATCGTTCCATGTTCTTACCTGTTCGGTTTAGGCAAGTGGACGGCGGCAAGTGGTCGGCGTTG GTGATTTGTGGAAACTTCTACTTCCTAATGCATCTAGTTCTTTCTTTTGGGAGGATCTTGGTAGAAGATGGACCTTCTAGAGCCCTGCGTGTCACTATAC TCAAGGAAGACAAGGTGAATGTTGTTAAGATCAGCGATTGGATGCCAGAAAGTGAACCAGTAGGCACTGTAGGGATAAGAGGACCTCCATCAATGTCACA GTTATCAGGGAATGACTATCAACAGCAGCAATTCCCAGCTAACTCCGATTCTGAATTCCATGTTATTGTTGAGCTAGCGGAACTTGGAATCTCTATTATC GACCATACCCCTGAAGAAATTTTATACATGTCAGTGCAGAATCTGCTGTTGGCATATTCTACTGGTCTGGGATCTGGTTTCAGTAGGTTCAAGTTAAGAA TGCACGGAATACAAGTGGACAACCAGCTGCCATTAACTCCAATGCCAGTTCTTTTCAGGCCACAGAAAATTGGAGACGAGGCAGATTACATTTTGAAGTT CTCCATGACAATGCAATCAAATGGTTCACTTGATTTATGTGTCTATCCGTACATTGGATTTAGTGGACCTGATAGTGCTGCCTTCTTAATTAACATTCAT GAACCTATCATTTGGCGCCTTCATGAGATGATGCAACAAGTCAACTTCAGCAGGTTATCTGACACGCAAACAACTGCTGTTTCTGTTGATCCGATCATTG AAATTGGTGTTCTAAACATATCCGAAGTTCGATTCAAAGTGTCAATGGCCATGTCACCAAGTCAGCGACCAAGAGGGGTGCTTGGGTTCTGGTCATCCTT GATGACTTCTTTGGGGAACACTGAAAATATGCCTATAAGAGTGAATGAAAGATTCCATGAAAAAGTGTGTATGAGGCAGAGTGCAATGGTTAGTAATGCT ATTGCAAACGTCAAGAAGGACATTCTTGGGCAGCCTCTTCAACTACTCTCTGGTGTTGATATACTGGGTAATGCAAGCAGCGCCCTTGGACACATGAGTA AAGGTGTAGCTGCTCTTTCAATGGATAAGAAGTTCATCCAGAGTAGGCAAAGACAGGAGAACAAAGGAGTGGATGACCTTGGCGATGTTATCAGAGAGGG AGGAGGAGCTCTTGCAAAGGGGTTATTCAGAGGGGTCACTGGTATTTTAACAAAGCCCCTTGAAGGCGCAAAATCATCTGGGGTAGAGGGTTTTGTCCAA GGAGTTGGAAAAGGATTAATTGGTGCAGCTGCTCAACCTGTTAGTGGGGTTCTGGATCTTCTGTCAAAAACCACTGAAGGTGCCAATGCTATGAGAATGA AGATAGCATCTGCCATAACTTCAGAAGAGCAGCTTCTACGAAGGAGACTGCCCCGTGTAATTGGTGGTGATAATTTGATTCGACCATATAATGAGTACAA AGCGCAAGGCCAGGTTATACTTCAACTGGCGGAGTCCGGCTCCTTTTTTGGCCAGGTTGATCTTTTCAAAGTACGTGGGAAGTTTGCCTTATCAGATGCT TATGAAGATCATTTCATTCTTCCTAAAGGGAAGATTGTTATGGTCACGCATAGAAGAGTTATGCTATTGCAACAACCTTCAAACATAATTGGTCAGAGAA AGTTCAGTCCAGCTAGAGATCCATGTTCAGTACTGTGGGATGTGCTGTGGTGTGACTTGGTGACCATGGAGTTGACTCATGGGAAGAAAGACCAACAAAA GTCTCCACCTTCGAAACTGCTAATCTATCTACGAAGTAGACCAACCGAGTTGAAGGAGCAATTTCGTGTCGTGAAATGCAGCCGTGAAACTGATCAAGCT CTCGAAGTCTACTGCTCAATCGAACGAGCAATGAATGCCTATGGACGCAACACTCTACAGGAACTGCTGAAGAACAAAGTGATGAAACCGTATGCACCAA GTTCAGAAGGAACCCATAATATGGAAGCAATGACGAAAGAAGGGAATTCTTCCTGGCATCCTCCAATCCCCAGACACCCTTCTAATTCGACTTTCGGCAG CAGCACCAACTGA
AA sequence Show only first row Show all	>Lus10017107 pacid=23167465 polypeptide=Lus10017107 locus=Lus10017107.g ID=Lus10017107.BGIv1.0 annot-version=v1.0 MVQPPPGNSWLGSLIGTVIGNLKISISNVHIRYEDSSSNSGHSFSCGVTLAKLAAVTTDEEGNETFDTSGALDRLRKSLQLERLAMYHNTDSLPWKINKT WETLSPKEWVEIFEDGINEPEGCKGSVSKWAAGRSYLVSPINGVLKYHRLGKQERIDPEVPFEKASLVLTDVSLTMTELQYHDWIKLLEVVSRYKTYVEI SHLRPEVPVSQDPCLWWRYAAQAILQQKKMCYRLSWDRIRYLCQLRHRYVQLYAASLQQSSDVHIKELREIEKDLDSKVILLWRLLAHAKVETAKTKEAA EQRRLKKKSWFSLRWAKYFLTVSIEHAAARIIDMNGIEIVCGRFERLHVSTKLRNRSMHCDVLLKFYGVYAPEGSLAQSVSSERKANALSASFVHSPVGE NIDWRLSATISPCHATVLMESLDRVFEFMKRSNAVSPTVALDTANALQMKIEKVTRRAQEQFQTALEEQCRFAFDIDLDAPKVRVPIKPIGSSKCDTYFL LDFGHFTLQTKERQSDEQKQSIYSRFCISGRDIAAFFTDSEEGNGDFYSMVDRCGMDVIVDQIKVPHPHYPSTRISVQIPNLSIHFSPERYHRLMELVNI LNNTVENCEQSTVNNFQQISAWNSADFATDARILVWKGIGNSVATWQPCFLVLSGLYLYVMESTDSQSHQRYLSMAGRQVDDVPPSNVGGSPFCIAVSLR GMDIQQAPSTLSLLGETGDLVGDIGGEFNEPHTPNSRAADLVVNGSLVETRICIYAKPGDEVDKKSEETLIAEILASGGKVYLIHSLGDLTAKMKLHSLK IKDELQSYPSTNPQYLVCSVVNNEKPLPYPHTPEPQGKDTPGVASDDADTFTDALPEFLNASDSIYSPRLEMSHSGDVSDLYGSSEFDSEDLLRRRSISS EIFYEAQGGDHVDFVSVVFSTRSSASPDYDGIDTQMSIRMSKLEFFCNRPTLVALIGFGIGLSSVGSVKSNDDETENLDDKSKGKEKSEDTERVKGLLGY GKNRVVFYLNMNVDNVTVILNKEDGSQLAMLIQESFLLDLKVHPSSLSIEGTLGNFKLCDMSLGRSHCWSWLCDIRNPGIESLIKFKFNSYSTEDDDYEG YDYSLSGRLSAVRIVFLYRFVREITAYFVQLATPQTEEAIKLVDKVGGFEWLIQKYEIDGATALKLDLSLDTPIIIIPRNTTNKDFIQLDLGQLKVTNEL SWHGNPEKDPSAVHMDVLHAEILRFNMSVGIDGCLGKPIVRDGQGLDIYVRRSLRDVFRKVPNFALEVRVGFLHGVMSDKEYKVILDCISMNLNEEPCLP PIFRGSKSDSTDAMQLLVDKVNMNSQMLLAHSVTVMAVEINYALLELCNGVHESPLAHLVLEGLWVSYRITSLSETDLYVTIPKFSIVDIRPGTKPEMRL MLGSSADASKQTSSGSLPYHQNKGSFRRLNSTSVLETDVINSTMFLMDYRWRPSSQSYVVRVQQPRILVVPDFLLAVGEFFVPSLGQITGREESMDPKKD TIYRSNCIVLSEPVYKQSEDVVHLSPNRRLVADLKGVDEYIYDGCGKTIVLSEQSSLKETDTSHPQPIIIVGRGKRLQFVDIKIENGFLLRKYTHLSNDS SYSVSIDDGVDISLVENSSPEERLQDYMREASASTSTFNSQIESNILPSVTFEAQVVSPELTFYDSTKSSLDDSSYGEKLLRAKMDLSFMYASKENDTWI RAAVKDLSVETGSGLMILAPVDISGGYTSIKDKTNMSLISTDVCFHLSLSTVSLLLNLQNQATTALQFGNAIPLAPCTNFDRVWVSPKVLVLAVNNTYGR VRKPIGFNLIALLSEIQGFGCEGSSDIDSDCSIWMPVAPPGYTALGCVAHVGRQPPANHIVYCLRSDLVASTTYQECLLCAPPQQSSASGFSIWRMDNVI ASFYAHSSSEYPPKDSSCDLSHLLLWNYVTHPSPKEAILDSTGDGYKELKKPGNDGENSSGWDVLRSVSKATNCYISTPNFERIWWDRGSDVRRPISIWR PIARPGYAVLGDCIAEGLEPPALGIIFKADSPEFSSRPVQFTKVAHITGKGIDEVFFWYPIAPPGYAALGCIITRTDQPPSTNSFCCPRLDLVNQANIIE VPVSRSSTSKASQCWSIWRVENQGDPYNIVYAFIQACTFLARSDLKKPSSRLAFSIGDSMKPKSRDNVTAEIKLKCFSFTVLDSLCGMMTPLFDFTITNI KLATHGRMESMNAVLISSIAASTFNTQFEAWEPLVEPFDGIFKFETYDTNVHPPSRVAKRIRIAATSILNINISAANLETSVGTICSWRKQLELDEKATK LNEDSASQNAPGEEAAYSALDEDDFQTVIVENKLGCDLYLKRVEQNIDVVDQLQHNDSTSVWVPPPRFSDRLKVADGSRDARCYVAVHILEAKELPVLDD GNSHNMFCALRLLVDSQATEQQKFFSQSARTKWVKPMLSTTDELDGGTAKWNELFIFEIPRKGHARLEVEVTNLAAKAGKGEVVGAISLPIGHGSAMLKK VASVRMMHQPNNIQNIVSRPLKRKHDKADDMEDCGYLSVSTTYFEKSLLANFQRSKETGDSCNRDTGFWVGLNSSGSWESIRSLLPLSVVPKSLEKDFIA MEVIMKNGKKHAIFRGLVTVVNDSDIKLDISVLPLSMVDVNNPSFGSHNSAVFIEEIFENQRYHSTSGWGSKLHGSQSSDPGRWSTRDFSYSSKDFFEPS LPSGWQWASSWIIDKSEAVDGDGWAYAPEFHSLKWPPTSRSKSCLDVVRRRRWVRRRQEVCTGSYNENNDCIVVDPGSSAVLPWRNTSKDSDYCLQVRPS AGHSSYSWGQEVSVGSSYAFAKDQTLTDQGLLSRQSTLKQGSKMPIAFKLNQLEKKDVLCCCPSSGSKQFWFSVGADASVLTTELNTPVYDWTISINPPL RLENQLSCSAEFTIWEKAKEGGYTEQQHGIISSREGVNIYLADIHKPIYMTLLVHGGWVLEKPPILLMDLASSDHTSSFWMVHHQSKRRLRVNIERDMGG TFAAPKAIRFFVPYWIINDSSLPLVYRVVEIEGIDNTDGDSHSLSRIKSVKHTSKTPTMERRRSSMKRNFDIMEVIDDTSPIPSMLSLQDPAGRSGVTLF PSQKDAFLSRVGLAVAVRHSETYSPGISLHELEKKERIDVKAFSSDGSYYKLSALLKTSERTKVVHFQPHTLFINRVGRSVCLQQCDSHLVEWVHPTDPP KPFGWQSFARVEMLKLRVDGYQWSIPFSVYNEGTIRISLKNDARDDQLQLKIQVRSGTKTSRYEVIFRPDSSSSPYRIENRSMFLPVRFRQVDGGKWSAL VICGNFYFLMHLVLSFGRILVEDGPSRALRVTILKEDKVNVVKISDWMPESEPVGTVGIRGPPSMSQLSGNDYQQQQFPANSDSEFHVIVELAELGISII DHTPEEILYMSVQNLLLAYSTGLGSGFSRFKLRMHGIQVDNQLPLTPMPVLFRPQKIGDEADYILKFSMTMQSNGSLDLCVYPYIGFSGPDSAAFLINIH EPIIWRLHEMMQQVNFSRLSDTQTTAVSVDPIIEIGVLNISEVRFKVSMAMSPSQRPRGVLGFWSSLMTSLGNTENMPIRVNERFHEKVCMRQSAMVSNA IANVKKDILGQPLQLLSGVDILGNASSALGHMSKGVAALSMDKKFIQSRQRQENKGVDDLGDVIREGGGALAKGLFRGVTGILTKPLEGAKSSGVEGFVQ GVGKGLIGAAAQPVSGVLDLLSKTTEGANAMRMKIASAITSEEQLLRRRLPRVIGGDNLIRPYNEYKAQGQVILQLAESGSFFGQVDLFKVRGKFALSDA YEDHFILPKGKIVMVTHRRVMLLQQPSNIIGQRKFSPARDPCSVLWDVLWCDLVTMELTHGKKDQQKSPPSKLLIYLRSRPTELKEQFRVVKCSRETDQA LEVYCSIERAMNAYGRNTLQELLKNKVMKPYAPSSEGTHNMEAMTKEGNSSWHPPIPRHPSNSTFGSSTN

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G48090			calcium-dependent lipid-bindin...		Lus10017107 [exp]	0	1
AT1G48090			calcium-dependent lipid-bindin...		Lus10037833 [exp]	1.0	0.9876
AT1G58230			binding (.1)		Lus10028167 [exp]	1.4	0.9819
AT2G26890		KAM2, GRV2	KATAMARI2, GRAVITROPISM DEFECT...		Lus10033077 [exp]	3.0	0.9740
AT4G31570			unknown protein		Lus10026934 [exp]	4.5	0.9521
AT1G55860		UPL1	ubiquitin-protein ligase 1 (.1...		Lus10032589 [exp]	4.9	0.9717
AT4G17140			pleckstrin homology (PH) domai...		Lus10011036 [exp]	5.3	0.9536
AT5G36930			Disease resistance protein (TI...		Lus10004747 [exp]	5.7	0.9177
AT2G46560			transducin family protein / WD...		Lus10005975 [exp]	7.4	0.9635
AT4G33240		FAB1A	FORMS APLOID AND BINUCLEATE CE...		Lus10005173 [exp]	7.6	0.9198
AT2G46560			transducin family protein / WD...		Lus10005974 [exp]	7.9	0.8978

Compare expression of checked genes

Lus10017107 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.