Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G09270 211 / 4e-69 ATGSTU8 glutathione S-transferase TAU 8 (.1) AT2G29420 197 / 2e-63 GST25, ATGSTU7 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) AT2G29460 174 / 2e-54 GST22, ATGSTU4 GLUTATHIONE S-TRANSFERASE 22, glutathione S-transferase tau 4 (.1) AT2G29450 173 / 3e-54 ATGSTU1, AT103-1A, ATGSTU5 ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 1, glutathione S-transferase tau 5 (.1) AT2G29490 173 / 5e-54 GST19, ATGSTU1 GLUTATHIONE S-TRANSFERASE 19, glutathione S-transferase TAU 1 (.1) AT2G29470 172 / 6e-54 GST21, ATGSTU3 GLUTATHIONE S-TRANSFERASE 21, glutathione S-transferase tau 3 (.1) AT2G29480 166 / 2e-51 GST20, ATGSTU2 GLUTATHIONE S-TRANSFERASE 20, glutathione S-transferase tau 2 (.1) AT1G27130 164 / 2e-50 GST12, ATGSTU13 GLUTATHIONE S-TRANSFERASE 12, glutathione S-transferase tau 13 (.1) AT2G29440 155 / 3e-47 GST24, ATGSTU6 GLUTATHIONE S-TRANSFERASE 24, glutathione S-transferase tau 6 (.1) AT1G59700 152 / 5e-46 ATGSTU16 glutathione S-transferase TAU 16 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10021102 [exp] 271 / 2e-92 AT3G09270 245 / 2e-82 glutathione S-transferase TAU 8 (.1) Lus10021103 [exp] 266 / 2e-90 AT3G09270 250 / 1e-84 glutathione S-transferase TAU 8 (.1) Lus10016471 [exp] 190 / 1e-60 AT2G29420 234 / 8e-78 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Lus10040727 [exp] 186 / 4e-59 AT2G29420 216 / 6e-71 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Lus10040761 [exp] 183 / 7e-58 AT2G29420 233 / 1e-77 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Lus10016469 [exp] 174 / 4e-54 AT2G29420 230 / 2e-76 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Lus10001491 [exp] 168 / 4e-52 AT3G09270 185 / 5e-59 glutathione S-transferase TAU 8 (.1) Lus10035241 [exp] 166 / 2e-51 AT2G29420 188 / 5e-60 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Lus10040764 [exp] 166 / 3e-51 AT2G29420 229 / 6e-76 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.010G070900 [exp] 207 / 2e-67 AT2G29420 221 / 9e-73 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.010G061200 [exp] 190 / 1e-60 AT3G09270 202 / 8e-66 glutathione S-transferase TAU 8 (.1) Potri.016G023200 [exp] 186 / 5e-59 AT3G09270 189 / 1e-60 glutathione S-transferase TAU 8 (.1) Potri.006G024200 [exp] 186 / 5e-59 AT2G29420 188 / 4e-60 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.012G052200 [exp] 185 / 6e-59 AT2G29420 220 / 2e-72 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.016G023340 [exp] 184 / 2e-58 AT2G29420 194 / 3e-62 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.015G042000 [exp] 176 / 2e-55 AT2G29460 197 / 7e-64 GLUTATHIONE S-TRANSFERASE 22, glutathione S-transferase tau 4 (.1) Potri.016G104500 [exp] 170 / 6e-54 AT3G09270 196 / 2e-64 glutathione S-transferase TAU 8 (.1) Potri.008G175100 [exp] 171 / 1e-53 AT2G29420 169 / 1e-52 GLUTATHIONE S-TRANSFERASE 25, glutathione S-transferase tau 7 (.1) Potri.013G072400 [exp] 170 / 8e-53 AT3G09270 161 / 2e-49 glutathione S-transferase TAU 8 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0172 [flax] [poplar] Thioredoxin PF02798 [flax] [poplar] GST_N Glutathione S-transferase, N-terminal domain CL0497 [flax] [poplar] GST_C PF00043 [flax] [poplar] GST_C Glutathione S-transferase, C-terminal domain
Representative CDS sequence Show only first row Show all	>Lus10017208 pacid=23165753 polypeptide=Lus10017208 locus=Lus10017208.g ID=Lus10017208.BGIv1.0 annot-version=v1.0 ATGGAAACTACTGTGAAGGTGCTGGGATTCTGGGCGAGCCCGTACAGCAAAAGGGTGGAGCTCGCCCTGAAGTTGAAAGGAGTGGATTACGACTACTTGG AGAACGATTTCTTCAGTGGCGGCGATAAGAGTCCGTTGCTCCTCGAGTCGAATCCAGTTAACCGGACAGTCCCTGTTCTTATTCACAACGGCAGAACAAT TTCTGAGTCTGCCGTTATCCTGGAGTACATCGATGAAGAATGGCCCGGCAAACCCATATTCCCACTTGGTCTCCACGACAAGGCTAAGGCTCGGTTTTGG GCTACTTTTGCCCAAGAGAAGTGTTTCGGGGAAGTGTGGAAAATAGCGTATTGCAAAGACAATGAGGAGAAAGAGAAGCTGACACACAAGGCGCTGCAGA ACCTGAAAACACTCGAAGAACAGCTCAAGGGGAACCCGTTTTTCGGAGGCGAGGAGATCGGGATAGTCGACATAACTGCAAACTTCGTCGGGTATTGGCT GGGAGTGGTGGAAGAAGCCATTGGGATTGAGCTAGTCACCATTGAAAGGTTTCCGGAGCTCTGCAAGTGGATTGATAACTTCGCTGGGCATAGCAAGGTG AAGGAGACTCTCCCTCCCAGAGATGAACTCTTGGCCGCGTTGATACCTCGCCTTACTAACGCCCCTGCTTGGAAGTATGTTCTGTGA
AA sequence Show only first row Show all	>Lus10017208 pacid=23165753 polypeptide=Lus10017208 locus=Lus10017208.g ID=Lus10017208.BGIv1.0 annot-version=v1.0 METTVKVLGFWASPYSKRVELALKLKGVDYDYLENDFFSGGDKSPLLLESNPVNRTVPVLIHNGRTISESAVILEYIDEEWPGKPIFPLGLHDKAKARFW ATFAQEKCFGEVWKIAYCKDNEEKEKLTHKALQNLKTLEEQLKGNPFFGGEEIGIVDITANFVGYWLGVVEEAIGIELVTIERFPELCKWIDNFAGHSKV KETLPPRDELLAALIPRLTNAPAWKYVL

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G09270		ATGSTU8	glutathione S-transferase TAU ...		Lus10017208 [exp]	0	1
AT4G23180		RLK4, CRK10	cysteine-rich RLK (RECEPTOR-li...		Lus10007631 [exp]	3.6	0.9337
AT5G42020		BIP2, BIP	luminal binding protein, Heat ...		Lus10007778 [exp]	4.0	0.9232
AT3G04720		HEL, PR-4, PR4	HEVEIN-LIKE, pathogenesis-rela...		Lus10006557 [exp]	5.5	0.9226
AT3G57270		BG1	"beta-1,3-glucanase 1", beta-1...		Lus10014108 [exp]	9.0	0.9197
AT4G31940		CYP82C4	"cytochrome P450, family 82, s...		Lus10011658 [exp]	9.9	0.9267
AT3G11340		UGT76B1	UDP-dependent glycosyltransfer...		Lus10016461 [exp]	10.4	0.9306
AT5G37450			Leucine-rich repeat protein ki...		Lus10002278 [exp]	10.6	0.9131
AT1G22380		ATUGT85A3	UDP-glucosyl transferase 85A3 ...		Lus10014831 [exp]	16.9	0.9154
AT5G50760			SAUR-like auxin-responsive pro...		Lus10003140 [exp]	17.2	0.9202
AT2G37430	C2H2ZnF	ZAT11	C2H2 and C2HC zinc fingers sup...		Lus10030330 [exp]	17.3	0.9004

Compare expression of checked genes

Lus10017208 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.