Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10017269 pacid=23165826 polypeptide=Lus10017269 locus=Lus10017269.g ID=Lus10017269.BGIv1.0 annot-version=v1.0 ATGAACAACAACAGTGTCATGATGACTACTCCTCGCAGAAGTTTCTCCATGAACAACCACCAGGATCTCATCAACCTCATCCATGCTAACAACGATCTCA TCGGATTCGCTCCTCTGCCCCCTCCCTTTTACTCATCATACCCTCCGCCAGCTGCTGCCGCACCGCCTCTTCTTCCTTTCCCAGTTACTAGTATCCCCCG CCACACCTCCCTTCCTAACTACAATCATTACCAACCTAGGAAACCCGCTAACCGAACCAGGAAACATAAAACCAAACCGGTTGTTAATCGCCCCGACCAC CCGAAGCCTACTGCTGGTGGTGGTATGCCGGTCGGGCCGAAGGTTTCATCATATCCAGCTGGCAAAGTTGGTGATAAGGAAATTCCTGTTATATCCCTGG CGGCGGATGATCTGTTTATTAGTTTGCTAGCTCCGCCACCGAGCAGCCTCCCCCTGCCTAAGTTTTTCATTGGCAGCAGGGCCAAAAGGGCGCAGGTTAT GATGAGAAGCTGCACGGCGGAAGCTGCTGCTGCTGTCTCCGGTGGGAATGATGAAGGTTCTGTGGATAATCTCCGGCGACTTCTCAGGCTCCCATGA
AA sequence Show only first row Show all	>Lus10017269 pacid=23165826 polypeptide=Lus10017269 locus=Lus10017269.g ID=Lus10017269.BGIv1.0 annot-version=v1.0 MNNNSVMMTTPRRSFSMNNHQDLINLIHANNDLIGFAPLPPPFYSSYPPPAAAAPPLLPFPVTSIPRHTSLPNYNHYQPRKPANRTRKHKTKPVVNRPDH PKPTAGGGMPVGPKVSSYPAGKVGDKEIPVISLAADDLFISLLAPPPSSLPLPKFFIGSRAKRAQVMMRSCTAEAAAAVSGGNDEGSVDNLRRLLRLP

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10017269 [exp]	0	1
AT4G25320	AT-hook		AT hook motif DNA-binding fami...		Lus10031118 [exp]	5.7	0.9480
AT2G16750			Protein kinase protein with ad...		Lus10019787 [exp]	8.7	0.9308
AT4G34800			SAUR-like auxin-responsive pro...		Lus10007563 [exp]	8.8	0.9314
AT3G15730		PLDALPHA1	phospholipase D alpha 1 (.1)		Lus10039806 [exp]	11.7	0.9370
AT5G24080			Protein kinase superfamily pro...		Lus10039315 [exp]	15.2	0.8992
AT5G11590	AP2_ERF	DREB3, TINY2	TINY2, Integrase-type DNA-bind...		Lus10043240 [exp]	16.1	0.9288
AT2G45430	AT-hook	AHL22	AT-hook motif nuclear-localize...		Lus10006664 [exp]	16.6	0.9283
AT3G51930			Transducin/WD40 repeat-like su...		Lus10039568 [exp]	18.3	0.9235
AT3G15850		JB67, FADB, ADS...	FATTY ACID DESATURASE B, fatty...		Lus10041042 [exp]	22.6	0.9254
AT3G55230			Disease resistance-responsive ...		Lus10030318 [exp]	23.4	0.9197

Compare expression of checked genes

Lus10017269 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.