Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G35900 67 / 1e-13 bZIP ATBZIP14, FD-1, FD Basic-leucine zipper (bZIP) transcription factor family protein (.1) AT2G17770 52 / 1e-08 bZIP FDP, ATBZIP27 FD PARALOG, basic region/leucine zipper motif 27 (.1.2) AT2G41070 44 / 2e-05 bZIP DPBF4, ATBZIP12, EEL ENHANCED EM LEVEL, Basic-leucine zipper (bZIP) transcription factor family protein (.1), Basic-leucine zipper (bZIP) transcription factor family protein (.2), Basic-leucine zipper (bZIP) transcription factor family protein (.3) AT3G56850 44 / 2e-05 bZIP DPBF3, AREB3 ABA-responsive element binding protein 3 (.1) AT2G36270 44 / 3e-05 bZIP EEL, GIA1, ABI5 GROWTH-INSENSITIVITY TO ABA 1, ABA INSENSITIVE 5, Basic-leucine zipper (bZIP) transcription factor family protein (.1) AT3G19290 42 / 0.0001 bZIP AREB2, ABF4 ABA-RESPONSIVE ELEMENT BINDING PROTEIN 2, ABRE binding factor 4 (.1.2.3) AT1G45249 41 / 0.0002 bZIP AtABF2, ATAREB1, AREB1, ABF2 ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING PROTEIN 2, abscisic acid responsive elements-binding factor 2 (.1.2.3) AT4G34000 40 / 0.0004 bZIP AtABF3, ABF3, DPBF5 DC3 PROMOTER-BINDING FACTOR 5, abscisic acid responsive elements-binding factor 3 (.1.2.3) AT1G49720 40 / 0.0006 bZIP ABF1 abscisic acid responsive element-binding factor 1 (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10017284 [exp] 190 / 1e-62 AT4G35900 62 / 7e-12 Basic-leucine zipper (bZIP) transcription factor family protein (.1) Lus10022720 [exp] 42 / 8e-05 AT2G36270 312 / 2e-103 GROWTH-INSENSITIVITY TO ABA 1, ABA INSENSITIVE 5, Basic-leucine zipper (bZIP) transcription factor family protein (.1) Lus10014066 [exp] 42 / 0.0001 AT3G19290 345 / 1e-115 ABA-RESPONSIVE ELEMENT BINDING PROTEIN 2, ABRE binding factor 4 (.1.2.3) Lus10006489 [exp] 42 / 0.0002 AT1G45249 297 / 1e-97 ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING PROTEIN 2, abscisic acid responsive elements-binding factor 2 (.1.2.3) Lus10009755 [exp] 41 / 0.0002 AT1G45249 283 / 3e-91 ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING PROTEIN 2, abscisic acid responsive elements-binding factor 2 (.1.2.3) Lus10017049 [exp] 41 / 0.0002 AT2G36270 321 / 1e-106 GROWTH-INSENSITIVITY TO ABA 1, ABA INSENSITIVE 5, Basic-leucine zipper (bZIP) transcription factor family protein (.1) Lus10008927 [exp] 40 / 0.0003 AT3G56850 139 / 1e-41 ABA-responsive element binding protein 3 (.1) Lus10021369 [exp] 40 / 0.0003 AT2G36270 322 / 2e-107 GROWTH-INSENSITIVITY TO ABA 1, ABA INSENSITIVE 5, Basic-leucine zipper (bZIP) transcription factor family protein (.1) Lus10014194 [exp] 40 / 0.0004 AT2G36270 342 / 2e-114 GROWTH-INSENSITIVITY TO ABA 1, ABA INSENSITIVE 5, Basic-leucine zipper (bZIP) transcription factor family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.005G109500 [exp] 80 / 3e-18 AT4G35900 179 / 5e-55 Basic-leucine zipper (bZIP) transcription factor family protein (.1) Potri.002G018400 [exp] 70 / 4e-15 AT4G35900 133 / 5e-38 Basic-leucine zipper (bZIP) transcription factor family protein (.1) Potri.005G243400 [exp] 50 / 2e-07 AT4G35900 117 / 4e-31 Basic-leucine zipper (bZIP) transcription factor family protein (.1) Potri.008G010800 [exp] 47 / 1e-06 AT3G56850 246 / 3e-80 ABA-responsive element binding protein 3 (.1) Potri.009G164500 [exp] 46 / 5e-06 AT3G44460 160 / 2e-46 basic leucine zipper transcription factor 67, Basic-leucine zipper (bZIP) transcription factor family protein (.1) Potri.010G248100 [exp] 45 / 9e-06 AT3G56850 243 / 2e-79 ABA-responsive element binding protein 3 (.1) Potri.010G248300 [exp] 44 / 2e-05 AT3G56850 216 / 9e-69 ABA-responsive element binding protein 3 (.1) Potri.002G125400 [exp] 41 / 0.0002 AT1G45249 306 / 4e-100 ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING PROTEIN 2, abscisic acid responsive elements-binding factor 2 (.1.2.3) Potri.001G220700 [exp] 40 / 0.0003 AT3G56850 152 / 2e-44 ABA-responsive element binding protein 3 (.1) Potri.014G028200 [exp] 40 / 0.0004 AT1G45249 317 / 2e-105 ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING PROTEIN 2, abscisic acid responsive elements-binding factor 2 (.1.2.3)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0018 [flax] [poplar] bZIP PF00170 [flax] [poplar] bZIP_1 bZIP transcription factor
Representative CDS sequence Show only first row Show all	>Lus10017283 pacid=23165864 polypeptide=Lus10017283 locus=Lus10017283.g ID=Lus10017283.BGIv1.0 annot-version=v1.0 ATGGAACAAGTATGGCAAGATATCAGCATGTGTCCCCTGCAAGACAACTCCACCCCGCCGCCACCCGCCGCCACTCAAGGACATCAAATCGGAAACCTCC ACGACTTCTTCACCGCCGCCGACCGGACCCCCCCTGAGCCGCCGATTTCTCAAAAGGGTATCACTTTCCCTCCCTTTTCCCATTTGGTGGGTTCCCCTGT TTTCCAAGGAATCTCTAGTCCGACCATGGTGGGATCCAAACCCGCCGACAAGAAATCTTTGTCCGGCGAGCAGTGGCACAAGCGAAGGATTAAGAACAGG GAATCCGCGGATCGATCCAGAGCTAGAAAACAGGAACTTATTCCTCTGTACTCTCTGTTTTCATTTTCCTCCTCTGCGTACACTCAGGAACTGGAGCTTA AAGTGGATCAATTGAAGAAGGAGAACGCCAAGCTCAGAAGGCTACTGCATCTTGAACTTGAAGTAGTTGGTGCCGAGCTTCCAAAAAAGAACACTCTCTG TAGAACCTTAACAGCTCCATTTTAA
AA sequence Show only first row Show all	>Lus10017283 pacid=23165864 polypeptide=Lus10017283 locus=Lus10017283.g ID=Lus10017283.BGIv1.0 annot-version=v1.0 MEQVWQDISMCPLQDNSTPPPPAATQGHQIGNLHDFFTAADRTPPEPPISQKGITFPPFSHLVGSPVFQGISSPTMVGSKPADKKSLSGEQWHKRRIKNR ESADRSRARKQELIPLYSLFSFSSSAYTQELELKVDQLKKENAKLRRLLHLELEVVGAELPKKNTLCRTLTAPF

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G35900	bZIP	ATBZIP14, FD-1,...	Basic-leucine zipper (bZIP) tr...		Lus10017283 [exp]	0	1
AT5G22080			Chaperone DnaJ-domain superfam...		Lus10013354 [exp]	2.2	0.9338
AT3G09920		PIP5K9	phosphatidyl inositol monophos...		Lus10022606 [exp]	5.1	0.9115
AT1G08230		ATGAT1	L-GAMMA-AMINOBUTYRIC ACID TRAN...		Lus10037914 [exp]	6.9	0.8892
AT1G18030			Protein phosphatase 2C family ...		Lus10009642 [exp]	9.4	0.9059
AT2G32760			unknown protein		Lus10016662 [exp]	15.2	0.9043
AT1G10320	C3HZnF		Zinc finger C-x8-C-x5-C-x3-H t...		Lus10038139 [exp]	16.1	0.8654
AT1G29280	WRKY	ATWRKY65, WRKY6...	WRKY DNA-binding protein 65 (....		Lus10007305 [exp]	18.4	0.9074
AT2G38310		RCAR10, PYL4	regulatory components of ABA r...		Lus10022675 [exp]	18.7	0.8716
AT1G08230		ATGAT1	L-GAMMA-AMINOBUTYRIC ACID TRAN...		Lus10038640 [exp]	20.0	0.8787
AT4G35900	bZIP	ATBZIP14, FD-1,...	Basic-leucine zipper (bZIP) tr...		Lus10017284 [exp]	20.8	0.8970

Compare expression of checked genes

Lus10017283 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.