Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G50790 418 / 7e-145 esterase/lipase/thioesterase family protein (.1) AT5G49950 157 / 1e-42 alpha/beta-Hydrolases superfamily protein (.1) AT1G34340 141 / 4e-37 alpha/beta-Hydrolases superfamily protein (.1) AT2G03140 112 / 2e-26 alpha/beta-Hydrolases superfamily protein (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10001673 [exp] 564 / 0 AT3G50790 536 / 0.0 esterase/lipase/thioesterase family protein (.1) Lus10035744 [exp] 157 / 2e-42 AT5G49950 631 / 0.0 alpha/beta-Hydrolases superfamily protein (.1) Lus10036590 [exp] 153 / 3e-41 AT5G49950 638 / 0.0 alpha/beta-Hydrolases superfamily protein (.1) Lus10037322 [exp] 152 / 1e-40 AT5G49950 632 / 0.0 alpha/beta-Hydrolases superfamily protein (.1) Lus10037325 [exp] 147 / 1e-38 AT5G49950 627 / 0.0 alpha/beta-Hydrolases superfamily protein (.1) Lus10035739 [exp] 145 / 3e-38 AT5G49950 627 / 0.0 alpha/beta-Hydrolases superfamily protein (.1) Lus10017327 [exp] 117 / 2e-31 AT3G50790 102 / 9e-27 esterase/lipase/thioesterase family protein (.1) Lus10034894 [exp] 120 / 7e-29 AT2G03140 697 / 0.0 alpha/beta-Hydrolases superfamily protein (.1.2) Lus10033426 [exp] 110 / 1e-25 AT2G03140 1245 / 0.0 alpha/beta-Hydrolases superfamily protein (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.003G146500 [exp] 435 / 2e-151 AT3G50790 512 / 0.0 esterase/lipase/thioesterase family protein (.1) Potri.004G223100 [exp] 161 / 5e-44 AT5G49950 648 / 0.0 alpha/beta-Hydrolases superfamily protein (.1) Potri.013G115000 [exp] 140 / 9e-37 AT1G34340 629 / 0.0 alpha/beta-Hydrolases superfamily protein (.1) Potri.006G136900 [exp] 103 / 1e-23 AT2G03140 1356 / 0.0 alpha/beta-Hydrolases superfamily protein (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0028 [flax] [poplar] AB_hydrolase PF00561 [flax] [poplar] Abhydrolase_1 alpha/beta hydrolase fold
Representative CDS sequence Show only first row Show all	>Lus10017332 pacid=23140206 polypeptide=Lus10017332 locus=Lus10017332.g ID=Lus10017332.BGIv1.0 annot-version=v1.0 ATGCACTCATCGGAGCAGAAGAAGGACTCCCAAGTTAAGGGGAAACGGATTCAAGGACGGCGAGCGGACGGAATCGGGAAAAAACAACGAGAAGAGGGTA TAGAGCAGAAGTCTCCGGCGGCGGCAAGGACCTCTTCCTCCCTGCACTCAAGACAATACACCATCCCTACTCCGCTTACCCACTCGTCGCCTCCAATCGC CACGTCGAGACCATCTTCGCCTCCTTCTATCGCTCCAAACCCGACGTCAAATACAAGCGAGAGGTCCTCCGTACGAAGGACGACGGCTCCGCTTGCCTCG ATCGGGGATGCGAAGGACGACGGCTCCGTTTCCCTCGATTGGGTCTCCGGCGATGATCGCCGATTTCCCCGCGAATCTCCCGTTCTCATTCTGCTGCCGG GATTAACCGGAGGTAGCCAAGATTCGTACGTTAGGCATATGTTGATTAGAGCCAGAAGCAAAGGGGGGAGCGTGGTCGGTTTGACTAGGAGAAACAGTCC TGTCACCACTCCTCAGTTCTACTCGGCTTCGTTTTTAGGAGACATTCGAGAAGTAGTGGCTCATGTTGGCGGTAGATATCCAGATGCCAATTTGTATGCG ATTGGCTGGTCTGTTGGTGCCAATATTCTTGTCAGTTACTTGGCTCAGGATTCTGATGAGACTCGTCGACTATCTGGTGCGGTGTCCTTGTGTAATCCTT TCAATTTGGTCATTGCAGACCAGGACTTCAGAAAGGGGTTCAATAACATCTATGATAAATCTCTTTCAAAATCCCTCCGTAGAATTTTCAACAAGCATGC ACTTCTTTTCGAAGATATCGGTGGCGAGTACAACATCAAGTTGGCTGCTAATGCCAGGACTGTTAGGGAATTTGATGATGGACTGACCCGCGTTTCATTT GGTTTCAAGTCGGTGGATGAGTACTATTCGAAATCCAGCAGTTCGGATTCGATCAAGCATGTTCGTAAGCCTCTGCTCTGCATCCAGGCTGCCAATGATC CAATTGCTCCTGCGTGGGGGATACCCAAAAAAGAAATCATGGAAAACCCCAACTGTTTGCTGATAGTAACACCAAAGGGGGGACATCTGGGATGGGTTGC AGGCAGCGGAGCTCCGTTCGGAGCTCCATGGACAGACCCGATAGTGATGGATTTCCTGGAACATCTGGAGGGAGCTGGCTCTTCATCATCTCCAGTTCTT GCTCAAACTCAAATCCCCATGACCGCACAGAAGCTTGAATAA
AA sequence Show only first row Show all	>Lus10017332 pacid=23140206 polypeptide=Lus10017332 locus=Lus10017332.g ID=Lus10017332.BGIv1.0 annot-version=v1.0 MHSSEQKKDSQVKGKRIQGRRADGIGKKQREEGIEQKSPAAARTSSSLHSRQYTIPTPLTHSSPPIATSRPSSPPSIAPNPTSNTSERSSVRRTTAPLAS IGDAKDDGSVSLDWVSGDDRRFPRESPVLILLPGLTGGSQDSYVRHMLIRARSKGGSVVGLTRRNSPVTTPQFYSASFLGDIREVVAHVGGRYPDANLYA IGWSVGANILVSYLAQDSDETRRLSGAVSLCNPFNLVIADQDFRKGFNNIYDKSLSKSLRRIFNKHALLFEDIGGEYNIKLAANARTVREFDDGLTRVSF GFKSVDEYYSKSSSSDSIKHVRKPLLCIQAANDPIAPAWGIPKKEIMENPNCLLIVTPKGGHLGWVAGSGAPFGAPWTDPIVMDFLEHLEGAGSSSSPVL AQTQIPMTAQKLE

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G50790			esterase/lipase/thioesterase f...		Lus10017332 [exp]	0	1
AT5G64970			Mitochondrial substrate carrie...		Lus10026043 [exp]	7.3	0.8211
AT1G11270			F-box and associated interacti...		Lus10013934 [exp]	15.0	0.7665
AT5G66760		SDH1-1	succinate dehydrogenase 1-1 (....		Lus10024015 [exp]	18.6	0.7843
AT3G57880			Calcium-dependent lipid-bindin...		Lus10012026 [exp]	21.2	0.7660
AT1G63910	MYB	AtMYB103	myb domain protein 103 (.1)		Lus10032298 [exp]	21.8	0.8043
AT3G15270	SBP	SPL5	squamosa promoter binding prot...		Lus10018610 [exp]	32.0	0.7171
AT5G06390		FLA17	FASCICLIN-like arabinogalactan...		Lus10029353 [exp]	37.8	0.7669
AT2G16640		ATTOC132, TOC13...	multimeric translocon complex ...		Lus10034170 [exp]	41.5	0.7564
AT1G75640			Leucine-rich receptor-like pro...		Lus10033926 [exp]	43.9	0.7314
AT5G64290		DCT, DIT2.1	dicarboxylate transport 2.1 (....		Lus10023779 [exp]	50.2	0.7462

Compare expression of checked genes

Lus10017332 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.