Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G25140 85 / 2e-21 OLE1, OLEO1 oleosin 1 (.1) AT2G25890 69 / 1e-15 Oleosin family protein (.1) AT5G51210 66 / 4e-14 OLEO3 oleosin3 (.1) AT3G18570 52 / 1e-08 Oleosin family protein (.1) AT1G48990 48 / 2e-07 Oleosin family protein (.1) AT5G40420 47 / 1e-06 OLE2, PA23, OLEO2 oleosin 2 (.1) AT3G27660 42 / 4e-05 OLE3, OLEO4 OLEOSIN 3, oleosin 4 (.1) AT3G01570 40 / 0.0002 Oleosin family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10028822 [exp] 126 / 5e-38 AT4G25140 146 / 3e-46 oleosin 1 (.1) Lus10027161 [exp] 114 / 1e-32 AT4G25140 154 / 3e-48 oleosin 1 (.1) Lus10031387 [exp] 113 / 1e-32 AT4G25140 164 / 1e-52 oleosin 1 (.1) Lus10039683 [exp] 110 / 3e-31 AT4G25140 159 / 2e-50 oleosin 1 (.1) Lus10010943 [exp] 117 / 4e-31 AT1G22400 535 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) Lus10022141 [exp] 59 / 1e-10 AT4G25140 106 / 3e-28 oleosin 1 (.1) Lus10017992 [exp] 50 / 5e-08 AT3G18570 136 / 4e-41 Oleosin family protein (.1) Lus10032461 [exp] 50 / 8e-08 AT3G18570 142 / 1e-43 Oleosin family protein (.1) Lus10041987 [exp] 49 / 2e-07 AT3G18570 129 / 2e-38 Oleosin family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G080000 [exp] 90 / 1e-23 AT4G25140 108 / 1e-30 oleosin 1 (.1) Potri.003G150600 [exp] 89 / 4e-23 AT4G25140 124 / 3e-37 oleosin 1 (.1) Potri.006G234900 [exp] 61 / 3e-12 AT2G25890 113 / 1e-32 Oleosin family protein (.1) Potri.012G059400 [exp] 54 / 1e-09 AT3G18570 113 / 4e-32 Oleosin family protein (.1) Potri.018G057800 [exp] 51 / 9e-09 AT2G25890 91 / 5e-24 Oleosin family protein (.1) Potri.001G345800 [exp] 45 / 3e-06 AT3G01570 140 / 6e-43 Oleosin family protein (.1) Potri.017G071800 [exp] 39 / 0.0005 AT3G01570 130 / 4e-39 Oleosin family protein (.1) Potri.012G083400 [exp] 38 / 0.001 AT5G40420 97 / 2e-25 oleosin 2 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF01277 [flax] [poplar] Oleosin Oleosin
Representative CDS sequence Show only first row Show all	>Lus10017460 pacid=23163191 polypeptide=Lus10017460 locus=Lus10017460.g ID=Lus10017460.BGIv1.0 annot-version=v1.0 ATGGAACATCATGATCAGATGACACACGGCGGAAGCAGCATGCAGGAGCAGCAGCGACACCCCCCCTGCCCCCCCCCGCCCGGCGCCCGGAGGCGGAACC ACCCCCCCCGCGCCGCCACGGCCGGCGGATCCCTCCTAGTCCTTTCCGGTCTCATCCTGGCAGCCACCATCATTTTGCTCACCATAGCCACCCCTCTCCT TGTCCTGTGCAGCCCAGTTCTGGTGCCGGCTGTCATTACCGTGGGGCTCTTGATCACCGGGTTTCTCGCCTCCGGCGGGTTCGGCGTGGCTGCCATCACC GTCTTGTCCTGGATCTATAGGTATGTGAGCGGGAGGAAGGCGGTGGGAGCGGATTCACTGGAGCAAGCTCGGTCGAAGCTGACGGGGAAGGCGAGGGAGA TGAAGGATAGGGCGTCGGAGTTTGGACAGCAGCATGTCGGCACCGGCGGTCATCAACAGACTTCTTAA
AA sequence Show only first row Show all	>Lus10017460 pacid=23163191 polypeptide=Lus10017460 locus=Lus10017460.g ID=Lus10017460.BGIv1.0 annot-version=v1.0 MEHHDQMTHGGSSMQEQQRHPPCPPPPGARRRNHPPRAATAGGSLLVLSGLILAATIILLTIATPLLVLCSPVLVPAVITVGLLITGFLASGGFGVAAIT VLSWIYRYVSGRKAVGADSLEQARSKLTGKAREMKDRASEFGQQHVGTGGHQQTS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G25140		OLE1, OLEO1	oleosin 1 (.1)		Lus10017460 [exp]	0	1

Compare expression of checked genes

Lus10017460 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.