Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10028793 [exp] 253 / 5e-86 AT4G34630 42 / 7e-05 unknown protein
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.004G160700 [exp] 79 / 2e-18 AT4G34630 73 / 3e-16 unknown protein Potri.009G121700 [exp] 60 / 4e-11 AT4G34630 74 / 1e-16 unknown protein
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10017493 pacid=23163204 polypeptide=Lus10017493 locus=Lus10017493.g ID=Lus10017493.BGIv1.0 annot-version=v1.0 ATGGCCAAATCCTTCGCCTTCTTCCAGTCCGTCTTCTCCTCTTCCTCAGCCACCGCCACCGCCACCACAGCGGACGAACCGACGATCCTCGTCCAAGATG CTGACCTGTCGTCTTACTGGGAGTTCATCAACGCTTCAGACGCCGATTCCTCCGACACCGAGTCGGTTCTCAGCGTCGAGAACGGATTCGTGTCTCTGCC GGTCTTGTCTGAGGCTTTCTTGTTGACAACAGCCGTGGAGGAAGCGGTCCACGACGACGTTAAACAAGAAGATGATAAGGAATCTCGCTACGGATCAGCG AAAGAGGAGGCGGTGGTCATCGACGTCACGGATCGTGCCGTCTTCCGTCGGCAGATCGTGGTGAGTGACTATACATCGTACGCTGATCATTACTGCGGAT TGTACGGGAAGAGACAGGAAGATGATCTTGAAGAGGAGGAAGATGAGGAGGTGGACGAATACGGACGAGAAGACGAGCTGGTTCACGGGAAGCTTGAGAG TAAAAGGACGAGGAAGCTCGGGAAGAGAGCGTGTGCCAAAATGAGCAACTCCAAGCGCGACCCGTATCGCTACGTCAAGCGGGGATGCCTCTACGGTAAG CACAAGGCTTAA
AA sequence Show only first row Show all	>Lus10017493 pacid=23163204 polypeptide=Lus10017493 locus=Lus10017493.g ID=Lus10017493.BGIv1.0 annot-version=v1.0 MAKSFAFFQSVFSSSSATATATTADEPTILVQDADLSSYWEFINASDADSSDTESVLSVENGFVSLPVLSEAFLLTTAVEEAVHDDVKQEDDKESRYGSA KEEAVVIDVTDRAVFRRQIVVSDYTSYADHYCGLYGKRQEDDLEEEEDEEVDEYGREDELVHGKLESKRTRKLGKRACAKMSNSKRDPYRYVKRGCLYGK HKA

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G34630			unknown protein		Lus10017493 [exp]	0	1
AT3G26430			GDSL-like Lipase/Acylhydrolase...		Lus10006224 [exp]	1.7	0.9056
AT5G60850	DOF	OBP4, AtDof5. 4	OBF binding protein 4 (.1)		Lus10007976 [exp]	7.3	0.8852
AT1G65720			unknown protein		Lus10031363 [exp]	10.7	0.8836
AT5G58020			unknown protein		Lus10035833 [exp]	14.1	0.8481
AT1G75390	bZIP	ATBZIP44	basic leucine-zipper 44 (.1.2)		Lus10040428 [exp]	14.8	0.8832
AT3G26430			GDSL-like Lipase/Acylhydrolase...		Lus10036873 [exp]	15.0	0.8537
AT1G44414			unknown protein		Lus10025672 [exp]	16.5	0.8581
AT5G46800		BOU	A BOUT DE SOUFFLE, Mitochondri...		Lus10000906 [exp]	20.0	0.8515
AT2G36300			Integral membrane Yip1 family ...		Lus10021374 [exp]	21.4	0.8645
AT5G67020			unknown protein		Lus10019344 [exp]	26.4	0.8638

Compare expression of checked genes

Lus10017493 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.