Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G64080 97 / 2e-21 MAKR2 MEMBRANE-ASSOCIATED KINASE REGULATOR 2, unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10028754 [exp] 436 / 1e-149 AT1G64080 185 / 1e-53 MEMBRANE-ASSOCIATED KINASE REGULATOR 2, unknown protein Lus10029192 [exp] 121 / 4e-32 ND / Lus10017761 [exp] 112 / 3e-29 ND / Lus10010734 [exp] 113 / 1e-27 AT1G69980 159 / 1e-47 unknown protein Lus10023588 [exp] 106 / 9e-27 ND / Lus10025380 [exp] 113 / 2e-26 AT3G07610 516 / 8e-170 increase in bonsai methylation 1, Transcription factor jumonji (jmjC) domain-containing protein (.1), Transcription factor jumonji (jmjC) domain-containing protein (.2), Transcription factor jumonji (jmjC) domain-containing protein (.3) Lus10010593 [exp] 104 / 2e-26 ND / Lus10024766 [exp] 105 / 5e-26 ND / Lus10012423 [exp] 103 / 2e-25 ND /
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.003G133500 [exp] 193 / 7e-56 AT1G64080 147 / 2e-39 MEMBRANE-ASSOCIATED KINASE REGULATOR 2, unknown protein Potri.001G098000 [exp] 184 / 2e-52 AT1G64080 145 / 8e-39 MEMBRANE-ASSOCIATED KINASE REGULATOR 2, unknown protein Potri.015G027500 [exp] 96 / 2e-21 AT5G52870 90 / 4e-20 MEMBRANE-ASSOCIATED KINASE REGULATOR 5, unknown protein Potri.012G035700 [exp] 87 / 2e-18 AT5G52870 115 / 2e-29 MEMBRANE-ASSOCIATED KINASE REGULATOR 5, unknown protein
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10017532 pacid=23163195 polypeptide=Lus10017532 locus=Lus10017532.g ID=Lus10017532.BGIv1.0 annot-version=v1.0 ATGGAAGCTTTCACCTTACTCAAATACTGGCGCGGCGGTGGTGCTACCTCCTCCATCCTCATTCCTCCTCCTCCTCCTCGCCCCACAACCACCATCTTTA CTTCTGGTATCTCTCATGACAATGCCACTGACACGGACAACGAAGAAGATGCCGCTGGTGGGGATGATGGGTCTTTCTTCGACTTGGAGTTCTCCGTCGG AGATGACGTCGGAAAGGGCGATGTTGACGATTCCCAAGGAGATTGTACGGACGATGGAGATAGGGAGTATGATTTCACCCTCTCCTCCTCCTGCTCAGCT TCCAGCTCCAACAACGACCATGGCGACCTCACCACCACCGCCATTGCTCTTTCCCCTTCTTCTACTGACGAAATGTTCGGTCAATTGGTGCCCATGATGG ACTCTTCCGACGCGTTTAACCCTAAATCTCAGAGGATTCCCGTCTCCCTCCTCAAATCCGCCACCAAATTCCGTGTCTTTCTGTTAGGGTTCAAGAAGTC CAACTCCAAGGCCAGCAGCAACAACCCAGTTGCCCAGGAGGACAACAAAATTATTAGCGAGGTCACATCCACCGATTCCGCCGGAGATGCAGCGCCGGAA AGCGAGGACGATGAGAGTGGGAAGCAGAGCAAGCCGTTCACTGTGAAGTTCAAAGTCGAGGAAGTACCTGTTGTGTCTCTGTTCACGAGGGACAACAGCA GCAGCAGCAGCAGTAATAAGTCATCTTCCCTTACGGACAACGCCGACAACATTACTTCACCGGCGGCGTCTGTTTCCGACGAGAGGCAGAGGTTCTCGAA GGAGGCGTTGCAAAAGTACTTAAAGAAAGTGAAGCCTCTCTATGTCCGAGTTTCCAAGCGGTATGGGGACAAGCTGAGATTCTCCTCCTCCTCCTCCGGC CAACTGACGTTGACCTCCTCCGGCGGTGATATAACTCTGAAGTCTTCGCCGTCGATATCTGCATTGTCCACGGAGAAGATTCATCTCGAAGCCGTAGCGG AGAAGAGTGAAGTTCATCAAGTGACGAACACCACCACCAAGCAGGTCGGAGCAAAACAGGGGACTTTGCAGGCGGGACTTAGGGTAGTGTGCAAACACTT GGGGAAAAGCCGATCTGCATCTTCGGCGGCGGTGGCAGCGGCTCCTTCTCCTAATACGGCGGCGTCACAGAGGAGAGATGACTCGTTGTTGCAGCAGCAG GACGGGATTCAGAGCGCCATTCTTCACTGCAAGAGATCTTTCAATGCATCGCGAGCGAGACTAATGACGCTGAAGTTTGAGAAATATTTCAATTGTCCTT TCTATAAGTGTAGGTTCGAGAAGAAGTTGGAGGTGGTGTTGGCTGAGAACTCGGTGAGGCGCGCGATGAGAGCTACAATGGAGGCGAAGCTTGTTGAGAA GGATGCTGAGATTGAAGTTGTTTGTGCTGGGCTGGCACATGATCGTTCTGAATGA
AA sequence Show only first row Show all	>Lus10017532 pacid=23163195 polypeptide=Lus10017532 locus=Lus10017532.g ID=Lus10017532.BGIv1.0 annot-version=v1.0 MEAFTLLKYWRGGGATSSILIPPPPPRPTTTIFTSGISHDNATDTDNEEDAAGGDDGSFFDLEFSVGDDVGKGDVDDSQGDCTDDGDREYDFTLSSSCSA SSSNNDHGDLTTTAIALSPSSTDEMFGQLVPMMDSSDAFNPKSQRIPVSLLKSATKFRVFLLGFKKSNSKASSNNPVAQEDNKIISEVTSTDSAGDAAPE SEDDESGKQSKPFTVKFKVEEVPVVSLFTRDNSSSSSSNKSSSLTDNADNITSPAASVSDERQRFSKEALQKYLKKVKPLYVRVSKRYGDKLRFSSSSSG QLTLTSSGGDITLKSSPSISALSTEKIHLEAVAEKSEVHQVTNTTTKQVGAKQGTLQAGLRVVCKHLGKSRSASSAAVAAAPSPNTAASQRRDDSLLQQQ DGIQSAILHCKRSFNASRARLMTLKFEKYFNCPFYKCRFEKKLEVVLAENSVRRAMRATMEAKLVEKDAEIEVVCAGLAHDRSE

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G64080		MAKR2	MEMBRANE-ASSOCIATED KINASE REG...		Lus10017532 [exp]	0	1
AT5G55390		EDM2	ENHANCED DOWNY MILDEW 2 (.1.2)		Lus10001729 [exp]	1.7	0.9622
AT2G35640	Trihelix		Homeodomain-like superfamily p...		Lus10040628 [exp]	3.2	0.9713
AT1G75060			unknown protein		Lus10028777 [exp]	5.7	0.9184
AT3G63300		FKD1	FORKED 1 (.1.2)		Lus10004079 [exp]	5.9	0.9521
AT1G64080		MAKR2	MEMBRANE-ASSOCIATED KINASE REG...		Lus10028754 [exp]	6.3	0.9662
AT5G57380		VIN3	VERNALIZATION INSENSITIVE 3, F...		Lus10042869 [exp]	7.7	0.9296
AT3G58690			Protein kinase superfamily pro...		Lus10017647 [exp]	7.9	0.9457
AT3G13960	GRF	ATGRF5	growth-regulating factor 5 (.1...		Lus10033441 [exp]	8.9	0.9622
AT4G13640	GARP	UNE16	unfertilized embryo sac 16, Ho...		Lus10007132 [exp]	9.2	0.9198
AT1G58470		XF41, ATRBP1	RNA-binding protein 1 (.1)		Lus10018657 [exp]	9.6	0.9188

Compare expression of checked genes

Lus10017532 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.