Lus10017691 [FLAX]


External link
JGI Phytozome v13
Symbol
Arabidopsis homologues
Locus ID BLAST score/e-value TF class Alias TAIR10 short description
AT4G35160 187 / 7e-56 O-methyltransferase family protein (.1)
AT4G35150 167 / 9e-49 O-methyltransferase family protein (.1)
AT5G54160 132 / 3e-35 ATOMT1 O-methyltransferase 1 (.1)
AT1G77520 128 / 2e-33 O-methyltransferase family protein (.1)
AT1G51990 120 / 6e-31 O-methyltransferase family protein (.1.2)
AT3G53140 117 / 2e-29 O-methyltransferase family protein (.1)
AT5G53810 112 / 8e-28 O-methyltransferase family protein (.1)
AT1G63140 112 / 9e-28 O-methyltransferase family protein (.1.2)
AT1G33030 110 / 3e-27 O-methyltransferase family protein (.1)
AT1G77530 109 / 1e-26 O-methyltransferase family protein (.1)
Paralogs
Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Lus10018629 390 / 2e-135 AT4G35160 214 / 3e-66 O-methyltransferase family protein (.1)
Lus10018628 373 / 3e-128 AT4G35160 192 / 7e-58 O-methyltransferase family protein (.1)
Lus10001510 365 / 5e-125 AT4G35160 197 / 1e-59 O-methyltransferase family protein (.1)
Lus10033656 314 / 3e-105 AT4G35150 211 / 8e-65 O-methyltransferase family protein (.1)
Lus10017699 306 / 5e-102 AT4G35150 204 / 2e-62 O-methyltransferase family protein (.1)
Lus10033653 278 / 4e-91 AT4G35150 172 / 2e-50 O-methyltransferase family protein (.1)
Lus10015311 267 / 4e-87 AT4G35160 189 / 1e-56 O-methyltransferase family protein (.1)
Lus10008538 266 / 2e-86 AT4G35160 167 / 5e-48 O-methyltransferase family protein (.1)
Lus10039744 265 / 3e-86 AT4G35160 190 / 5e-57 O-methyltransferase family protein (.1)
Poplar homologues
Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Potri.019G093100 345 / 1e-117 AT4G35160 225 / 1e-70 O-methyltransferase family protein (.1)
Potri.013G121300 337 / 2e-114 AT4G35160 201 / 4e-61 O-methyltransferase family protein (.1)
Potri.013G120800 337 / 2e-114 AT4G35160 205 / 7e-63 O-methyltransferase family protein (.1)
Potri.013G122400 335 / 1e-113 AT4G35160 188 / 2e-56 O-methyltransferase family protein (.1)
Potri.013G121400 332 / 2e-112 AT4G35160 202 / 8e-62 O-methyltransferase family protein (.1)
Potri.013G121900 328 / 4e-111 AT4G35160 184 / 5e-55 O-methyltransferase family protein (.1)
Potri.019G093000 324 / 2e-109 AT4G35160 230 / 1e-72 O-methyltransferase family protein (.1)
Potri.011G059600 317 / 2e-106 AT4G35160 196 / 3e-59 O-methyltransferase family protein (.1)
Potri.004G050500 310 / 7e-104 AT4G35160 178 / 2e-52 O-methyltransferase family protein (.1)
Potri.013G122000 308 / 5e-103 AT4G35160 174 / 6e-51 O-methyltransferase family protein (.1)
PFAM info
Clan ID Clan name Pfam ID Pfam name Pfam description
CL0063 NADP_Rossmann PF00891 Methyltransf_2 O-methyltransferase domain
CL0123 HTH PF08100 Dimerisation Dimerisation domain
Representative CDS sequence
>Lus10017691 pacid=23155523 polypeptide=Lus10017691 locus=Lus10017691.g ID=Lus10017691.BGIv1.0 annot-version=v1.0
ATGGAGTTGAGTCTGAGTGAGCTCGTCCAAGCCCAGAGCCAAGTATGGCACCAAACCTTCAACTTTGTGACCTCCATGTCACTGAAATGCGCCATCCAGC
TCCGCATACCGGAAGCCATCCACGCTAACGGCGCCGGTCTGCCGATCACCCTCCCGGACCTCGTCGCTGCACTTGAAATCCCTCCCGGGAAAGCTCCCTA
TCTCCGCCGTCTGATGCGCCTCCTTGCTCATTGCGGCTTCTTCTCCGTCTCGGAAGGTGGCGGGGCCAAGTCCAACGGAACTCCAGTTCCAGACTACGAA
ATCAGGTACTCTCTTACTCCGGCCGGACGTTACCTAGTTCGGGAAGGCGGGGCCCTATTTCCCCTCATGGTCCTCAACCCGGTTCTGATGGCCCCGTACC
ATCAAATGAGCACGTGGTTCAGAAGCGACAAGGATGATACGACGGTTATTTCCGAAACTTACGACGCAAAGGACGCATGGAAGTACTTTTCGGCGGCTCC
CGAGATGTCTAAGCTGTTCGACGCCGCCATGGCCGCCGACAGTCACATTGTAGCGGAAGTGGTTGTGAAGGAATGTAATAACAAGGCTATCTTTGACGGC
GTTGGGTCTCTTGTTGACGTGGCTGGTGGGACCGGAATCATGGCCAAAGCCATCGCGGCGGGGTTCCCTCACGTCGGATGCTCAGTGCTTGATCTCCCGC
ATGTCGTCGCCAGCTTGGAAGACCATGATGGGAACGTTAAGTATATAGCCGGCGACATGTTTCAGGCCATTCCTCCGGCCGATGCCATTTTGCTCAAGTG
GGTACTACACGATTGGGACGACGAGAACAGCTTGAAAATATTGAAGAAGTGCAAAGAAGCATTGTCGTCGAGGACGATGAACAAGGGTAAAACGGGGAAA
TTGATTATCATAGATATGGTGGTGGATGATGAAAGTTCGGACGTCGAATTGACGACGACGCAATACTGTCTCGACATCGGGATGCTGGTAGCTCAAAAGG
GGCAGGAGAGGAATAAAGAGCAATGGGAGAAGCTATTCGCCGATGCTGGATTCACTAGATACTACATCAACCCGATTCTTAGGACGAGAGCTCTCATCGA
GGTCTATCCCTAG
AA sequence
>Lus10017691 pacid=23155523 polypeptide=Lus10017691 locus=Lus10017691.g ID=Lus10017691.BGIv1.0 annot-version=v1.0
MELSLSELVQAQSQVWHQTFNFVTSMSLKCAIQLRIPEAIHANGAGLPITLPDLVAALEIPPGKAPYLRRLMRLLAHCGFFSVSEGGGAKSNGTPVPDYE
IRYSLTPAGRYLVREGGALFPLMVLNPVLMAPYHQMSTWFRSDKDDTTVISETYDAKDAWKYFSAAPEMSKLFDAAMAADSHIVAEVVVKECNNKAIFDG
VGSLVDVAGGTGIMAKAIAAGFPHVGCSVLDLPHVVASLEDHDGNVKYIAGDMFQAIPPADAILLKWVLHDWDDENSLKILKKCKEALSSRTMNKGKTGK
LIIIDMVVDDESSDVELTTTQYCLDIGMLVAQKGQERNKEQWEKLFADAGFTRYYINPILRTRALIEVYP

DESeq2's median of ratios [FLAX]

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Coexpressed genes

Only top 10 genes are shown Show allDownload tab-delimited text
Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.
At best At TF class At alias At description Locus MR r Symbol HYPR_s2_CTRR_s2_FoxR_s4_CTRR_s4_FoxR_r1_CTRR_r1_FoxR_r3_CTRR_r3_FoxR_r1s2_CTRR_r1s2_FoxR_r3s2_CTRR_r3s2_FoxR_s6_CTRR_s6_Al4R_s6_Al12R_s6_Al24R_s8_CTRR_s8_Al4R_s8_Al12R_s8_Al24R_r5_CTRR_r5_Al4R_r5_Al12R_r5_Al24R_r7_CTRR_r7_Al4R_r7_Al12R_r7_Al24LEAF_NLEAF_PLEAF_NPKSAMAR_BetAR_rdfcPARTOP_BetTOP_rdfiFIBaiFIBbMID_BetMID_rdftFIBatFIB_GrtFIB_LitFIB_BitFIBbtFIBb_PUL8tFIBb_PUL24tFIBb_PUL96tFIBb_OPP8tFIBb_OPP24tFIBb_OPP96sXYLasXYLbsXYLb_PUL8sXYLb_PUL24sXYLb_PUL96sXYLb_OPP8sXYLb_OPP24sXYLb_OPP96
AT4G35160 O-methyltransferase family pro... Lus10017691 0 1
AT4G37370 CYP81D8 "cytochrome P450, family 81, s... Lus10007220 9.7 0.9994
AT1G72460 Leucine-rich repeat protein ki... Lus10015678 11.2 0.9929
Lus10033811 13.9 0.9990
AT3G15990 SULTR3;4 sulfate transporter 3;4 (.1) Lus10043247 16.6 0.9987
AT5G13620 unknown protein Lus10017168 17.0 0.9990
Lus10026149 17.2 0.9978
AT3G11930 Adenine nucleotide alpha hydro... Lus10029310 17.9 0.9966
Lus10015929 19.6 0.9990
Lus10016867 21.9 0.9990
AT5G17230 PSY PHYTOENE SYNTHASE (.1.2.3) Lus10039186 24.0 0.9836

Lus10017691 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.