Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G34000 166 / 7e-53 OHP2 one-helix protein 2 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10000462 [exp] 251 / 3e-86 AT1G34000 166 / 9e-53 one-helix protein 2 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.005G196100 [exp] 167 / 5e-53 AT1G34000 154 / 8e-48 one-helix protein 2 (.1) Potri.002G065000 [exp] 166 / 1e-52 AT1G34000 154 / 4e-48 one-helix protein 2 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00504 [flax] [poplar] Chloroa_b-bind Chlorophyll A-B binding protein
Representative CDS sequence Show only first row Show all	>Lus10017779 pacid=23177726 polypeptide=Lus10017779 locus=Lus10017779.g ID=Lus10017779.BGIv1.0 annot-version=v1.0 ATGTCAGCGGCGTCTTCATTCCCACCGTGCATCAATCTCCGGAACCCATCCCACTCCTCGTCCTCCTCTCCCTCCACTTCCGCCACCGCTACTTGTACAA ACTCCATCTCTTTCAGACCATCCTACTATAACGGTGTCATCATTCGTGCCTCCCAAGCTGAAGGACCCATTCGTAGACCCGTCGCCCCTCCTCTTAGACA GCCTTTGAAGCCTGCAGTTCCCCCTTCGTCTTCGTCTCCTCCTCCTCCTCCTCCTCCAGCTGTTGCCCAATTGGATATGTCTGGAGATAAGGGTTTTGTC ACTTTGGAATTTCAAAGGCAGAAGGCCAAAGAGCTACAGCAGTATTTTAAGCAGAAGAAGCTTGAAGAGGCCAATCTCGGTCCCTTCTTTGGCTTCCTTC CCAAAAATGAGATTTCTAATGGAAGATGGGCAATGTTCGGTTTCGCTGTTGGATTGCTGACAGAGTATGCAACAGGGTCAGACTTCGTTGTTCAAGTGAA GATCCTTTTCTCCAATTTCGGCATCTTAGACCTGGACTGA
AA sequence Show only first row Show all	>Lus10017779 pacid=23177726 polypeptide=Lus10017779 locus=Lus10017779.g ID=Lus10017779.BGIv1.0 annot-version=v1.0 MSAASSFPPCINLRNPSHSSSSSPSTSATATCTNSISFRPSYYNGVIIRASQAEGPIRRPVAPPLRQPLKPAVPPSSSSPPPPPPPAVAQLDMSGDKGFV TLEFQRQKAKELQQYFKQKKLEEANLGPFFGFLPKNEISNGRWAMFGFAVGLLTEYATGSDFVVQVKILFSNFGILDLD

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G34000		OHP2	one-helix protein 2 (.1)		Lus10017779 [exp]	0	1
AT4G26860			Predicted pyridoxal phosphate-...		Lus10032558 [exp]	3.5	0.8807
AT5G45275			Major facilitator superfamily ...		Lus10033270 [exp]	6.4	0.7810
AT3G26070			Plastid-lipid associated prote...		Lus10020982 [exp]	8.8	0.8796
AT1G15140			FAD/NAD(P)-binding oxidoreduct...		Lus10007954 [exp]	9.2	0.8504
AT5G19590			Protein of unknown function, D...		Lus10017733 [exp]	12.0	0.8161
AT4G14450		ATBET12	unknown protein		Lus10022200 [exp]	14.2	0.8001
AT4G28030			Acyl-CoA N-acyltransferases (N...		Lus10019975 [exp]	14.9	0.8192
AT4G14450		ATBET12	unknown protein		Lus10021878 [exp]	15.1	0.8667
AT1G34000		OHP2	one-helix protein 2 (.1)		Lus10000462 [exp]	17.7	0.8475
AT1G24040			Acyl-CoA N-acyltransferases (N...		Lus10030837 [exp]	22.4	0.7715

Compare expression of checked genes

Lus10017779 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.