Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G43840 97 / 5e-23 UGT74F1 UDP-glycosyltransferase 74 F1 (.1.2) AT1G05675 69 / 3e-13 UDP-Glycosyltransferase superfamily protein (.1) AT4G15490 63 / 2e-11 UGT84A3 UDP-Glycosyltransferase superfamily protein (.1) AT1G24100 63 / 3e-11 UGT74B1 UDP-glucosyl transferase 74B1 (.1) AT4G15480 62 / 5e-11 UGT84A1 UDP-Glycosyltransferase superfamily protein (.1) AT4G15500 57 / 2e-09 UGT84A4 UDP-Glycosyltransferase superfamily protein (.1) AT4G15550 54 / 2e-08 IAGLU indole-3-acetate beta-D-glucosyltransferase (.1) AT1G05560 54 / 2e-08 UGT75B1, UGT1 UDP-GLUCOSE TRANSFERASE 1, UDP-glucosyltransferase 75B1 (.1) AT2G31750 50 / 4e-07 UGT74D1 UDP-glucosyl transferase 74D1 (.1) AT2G23260 48 / 3e-06 UGT84B1 UDP-glucosyl transferase 84B1 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10006721 [exp] 145 / 8e-41 AT2G43820 392 / 9e-134 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10006353 [exp] 142 / 2e-39 AT2G43820 398 / 1e-135 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10008742 [exp] 137 / 9e-38 AT2G43840 478 / 6e-167 UDP-glycosyltransferase 74 F1 (.1.2) Lus10006352 [exp] 136 / 3e-37 AT2G43820 414 / 6e-142 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10014148 [exp] 135 / 4e-37 AT2G43840 407 / 2e-139 UDP-glycosyltransferase 74 F1 (.1.2) Lus10017825 [exp] 132 / 1e-35 AT2G43840 392 / 2e-133 UDP-glycosyltransferase 74 F1 (.1.2) Lus10009412 [exp] 98 / 3e-23 AT2G43820 474 / 1e-165 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10020556 [exp] 97 / 8e-23 AT2G43820 472 / 1e-164 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10010712 [exp] 94 / 5e-22 AT1G24100 462 / 1e-160 UDP-glucosyl transferase 74B1 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.014G175000 [exp] 121 / 5e-32 AT2G43840 411 / 8e-141 UDP-glycosyltransferase 74 F1 (.1.2) Potri.007G140500 [exp] 100 / 3e-24 AT2G43840 463 / 3e-161 UDP-glycosyltransferase 74 F1 (.1.2) Potri.015G071900 [exp] 100 / 3e-24 AT1G24100 427 / 5e-147 UDP-glucosyl transferase 74B1 (.1) Potri.017G032300 [exp] 94 / 4e-22 AT1G05675 465 / 6e-162 UDP-Glycosyltransferase superfamily protein (.1) Potri.007G117200 [exp] 90 / 2e-20 AT2G43840 461 / 1e-160 UDP-glycosyltransferase 74 F1 (.1.2) Potri.017G032766 [exp] 81 / 2e-18 AT2G43820 143 / 2e-40 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Potri.017G032733 [exp] 81 / 2e-17 AT1G05680 444 / 6e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.017G032700 [exp] 81 / 2e-17 AT1G05680 444 / 6e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.007G140300 [exp] 81 / 2e-17 AT1G05680 457 / 4e-159 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.017G032500 [exp] 81 / 3e-17 AT1G05680 446 / 1e-154 Uridine diphosphate glycosyltransferase 74E2 (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10017826 pacid=23148855 polypeptide=Lus10017826 locus=Lus10017826.g ID=Lus10017826.BGIv1.0 annot-version=v1.0 ATGGTGTGGCATAAAAACCCAAGTAAAACTCTCCTCTGCCTCTTGGTCGACTGGTGGCCTATAAATATTGGAGTGGAGCCAAAAGCTCAGCAACAAACAC CAAGAATCATCAATGGCGGCGGAACCCTTAAAACCCTCAAGACACTGCGTAGTAGCTCCTTTCCCAGCACAAGGACGCATCAATCCAATCCTTCAATTCT GCAAGCGCCTAATACCAAACGGAATCCATGTCACTCTGGTTCTAACTCGCTTCGTCGCCTCAACGATCACCCCACCGCTACCGCCGCCTTATCCAAAGTC CGCCTTGATACCATTTCCGATGGATATGAAGGGGGCGGTATAAGGGCGGCAGAGAGCGTCCAAGTCTACATGGACACATTCCAAGAAGTGGGTTCCGAAA CTCTGGCTCAACTTCTACGGAAACAGAGTGATGCAGGGGATCCCGTGCACTGCATTGTATACGATTCTTGCCTTCCTTGGTGCGTCCACGTTGCCGAGAG GTTCGGAGTGATGGGAGCTGCTTTCTTGGGGCAATCGTGTGCTGTTGATTCCATCTACAACCACGTCCACAATAAAATTTTGAAGACTCCCGTTGTACCA GATGTTAGTGGTGGAGGTTTGAAAGTAATTGTTCCAAGGCTGCCGGCGCCCTTGGAGCATCGGGATTTTCCGTCTTTTGTGATAGAGTCTGAACAAAATT ACTGGAGTTTTGGATCTGTTCATTGA
AA sequence Show only first row Show all	>Lus10017826 pacid=23148855 polypeptide=Lus10017826 locus=Lus10017826.g ID=Lus10017826.BGIv1.0 annot-version=v1.0 MVWHKNPSKTLLCLLVDWWPINIGVEPKAQQQTPRIINGGGTLKTLKTLRSSSFPSTRTHQSNPSILQAPNTKRNPCHSGSNSLRRLNDHPTATAALSKV RLDTISDGYEGGGIRAAESVQVYMDTFQEVGSETLAQLLRKQSDAGDPVHCIVYDSCLPWCVHVAERFGVMGAAFLGQSCAVDSIYNHVHNKILKTPVVP DVSGGGLKVIVPRLPAPLEHRDFPSFVIESEQNYWSFGSVH

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G43820		SGT1, ATSAGT1, ...	UDP-glucose:salicylic acid glu...		Lus10017826 [exp]	0	1
AT5G67360		ARA12	Subtilase family protein (.1)		Lus10006700 [exp]	1.4	0.9365
AT1G52820			2-oxoglutarate (2OG) and Fe(II...		Lus10023160 [exp]	3.0	0.9225
AT5G05320			FAD/NAD(P)-binding oxidoreduct...		Lus10033385 [exp]	3.2	0.9244
AT5G10695			unknown protein		Lus10042440 [exp]	3.7	0.8719
AT5G04220		SYT3, NTMCTYPE1...	synaptotagmin 3, Calcium-depen...		Lus10009226 [exp]	6.9	0.8761
AT2G29940		ABCG31, PDR3, A...	ATP-binding cassette G31, plei...		Lus10020550 [exp]	8.8	0.8890
					Lus10033191 [exp]	9.5	0.8688
					Lus10028940 [exp]	10.4	0.8593
AT1G52560			HSP20-like chaperones superfam...		Lus10023653 [exp]	11.5	0.8924
AT3G10020			unknown protein		Lus10002842 [exp]	13.0	0.8606

Compare expression of checked genes

Lus10017826 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.