Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G18570 114 / 3e-32 Oleosin family protein (.1) AT1G48990 97 / 1e-25 Oleosin family protein (.1) AT2G25890 61 / 7e-12 Oleosin family protein (.1) AT4G25140 60 / 2e-11 OLE1, OLEO1 oleosin 1 (.1) AT5G51210 57 / 1e-10 OLEO3 oleosin3 (.1) AT5G40420 49 / 2e-07 OLE2, PA23, OLEO2 oleosin 2 (.1) AT3G27660 49 / 2e-07 OLE3, OLEO4 OLEOSIN 3, oleosin 4 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10041987 [exp] 257 / 3e-88 AT3G18570 129 / 2e-38 Oleosin family protein (.1) Lus10032461 [exp] 130 / 1e-38 AT3G18570 142 / 1e-43 Oleosin family protein (.1) Lus10042957 [exp] 126 / 8e-37 AT3G18570 139 / 2e-42 Oleosin family protein (.1) Lus10027161 [exp] 74 / 1e-16 AT4G25140 154 / 3e-48 oleosin 1 (.1) Lus10031387 [exp] 73 / 2e-16 AT4G25140 164 / 1e-52 oleosin 1 (.1) Lus10039683 [exp] 70 / 4e-15 AT4G25140 159 / 2e-50 oleosin 1 (.1) Lus10010943 [exp] 71 / 3e-14 AT1G22400 535 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) Lus10028822 [exp] 64 / 2e-13 AT4G25140 146 / 3e-46 oleosin 1 (.1) Lus10017460 [exp] 64 / 7e-13 AT4G25140 136 / 9e-42 oleosin 1 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.012G059400 [exp] 131 / 4e-39 AT3G18570 113 / 4e-32 Oleosin family protein (.1) Potri.001G080000 [exp] 72 / 2e-16 AT4G25140 108 / 1e-30 oleosin 1 (.1) Potri.006G234900 [exp] 72 / 2e-16 AT2G25890 113 / 1e-32 Oleosin family protein (.1) Potri.015G081901 [exp] 67 / 3e-14 AT5G40420 108 / 5e-30 oleosin 2 (.1) Potri.T125308 [exp] 67 / 3e-14 AT5G40420 108 / 5e-30 oleosin 2 (.1) Potri.012G083400 [exp] 64 / 5e-13 AT5G40420 97 / 2e-25 oleosin 2 (.1) Potri.018G057800 [exp] 64 / 5e-13 AT2G25890 91 / 5e-24 Oleosin family protein (.1) Potri.003G150600 [exp] 62 / 2e-12 AT4G25140 124 / 3e-37 oleosin 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF01277 [flax] [poplar] Oleosin Oleosin
Representative CDS sequence Show only first row Show all	>Lus10017992 pacid=23147977 polypeptide=Lus10017992 locus=Lus10017992.g ID=Lus10017992.BGIv1.0 annot-version=v1.0 ATGGCTGACCACCGTCCTACCGTAGGCTCAGCACGCTCCACGCGCCCACCAACCTCCCCATCACTCACCACCGCCGCCGCCACCTCCTCCTCCCACCCAA CCATCTCCGCCGCAGCCGCCTTCCTCCACAGACTCCAAACTTTAATCCAGCGCCATGCACCGGGAAACACCGCCTCCACCCAGCTCATCGGCCTACTAAC TCTCTTCATCACCGGCTCCATCCTCCTCCTCCTCACCGGCGCCACCGTCGCTGTATTTGTCGTCTCCTTGATCTTCCTCGCCCCGATCCTCATCGTGTTC AGCCCGATATGGGTCCCGGTGGCCACTCTCTTGTTCGTCCTGGTGACCGGGTTCCTGACGTTCGCCGGGTTCGTGGTGGCGTTGGTCGGCGGGCTGTCGT GGGGGTATCGGTACTACCGAGGGATGAACCCGGTGGGGTCGGACCGGTTCGATTACGCGAGGGAGCGGATTTCGGATACGGCGGGAGCGGTCAAGGAGTA CGCTAGGGAGTACGGTGGGTATTTCCAGAGTAAGGTCAAGGATGCGGCTCCAGGTGCTTGA
AA sequence Show only first row Show all	>Lus10017992 pacid=23147977 polypeptide=Lus10017992 locus=Lus10017992.g ID=Lus10017992.BGIv1.0 annot-version=v1.0 MADHRPTVGSARSTRPPTSPSLTTAAATSSSHPTISAAAAFLHRLQTLIQRHAPGNTASTQLIGLLTLFITGSILLLLTGATVAVFVVSLIFLAPILIVF SPIWVPVATLLFVLVTGFLTFAGFVVALVGGLSWGYRYYRGMNPVGSDRFDYARERISDTAGAVKEYAREYGGYFQSKVKDAAPGA

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G18570			Oleosin family protein (.1)		Lus10017992 [exp]	0	1
AT5G45890		SAG12	senescence-associated gene 12 ...		Lus10028502 [exp]	1.7	0.9244
AT3G12910	NAC		NAC (No Apical Meristem) domai...		Lus10031766 [exp]	2.4	0.8948
					Lus10014377 [exp]	3.7	0.8942
AT5G49450	bZIP	ATBZIP1	basic leucine-zipper 1 (.1)		Lus10037750 [exp]	8.2	0.9155
AT3G16150		ASPGB1	asparaginase B1, N-terminal nu...		Lus10024795 [exp]	10.2	0.8642
AT4G13830		J20	DNAJ-like 20 (.1.2)		Lus10002356 [exp]	10.2	0.9042
AT4G36670		AtPMT6, AtPLT6	polyol/monosaccharide transpor...		Lus10041731 [exp]	11.5	0.9103
AT5G59340	HD	WOX2	WUSCHEL related homeobox 2 (.1...		Lus10016569 [exp]	12.7	0.8628
AT1G31260		ZIP10	zinc transporter 10 precursor ...		Lus10040615 [exp]	13.6	0.8548
AT3G16350	MYB		Homeodomain-like superfamily p...		Lus10037560 [exp]	16.9	0.8837

Compare expression of checked genes

Lus10017992 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.