Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G41790 1358 / 0 Insulinase (Peptidase family M16) family protein (.1) AT3G57470 1184 / 0 Insulinase (Peptidase family M16) family protein (.1), Insulinase (Peptidase family M16) family protein (.2), Insulinase (Peptidase family M16) family protein (.3) AT1G06900 480 / 4e-153 Insulinase (Peptidase family M16) family protein (.1) AT3G57460 202 / 2e-57 catalytics;metal ion binding (.1) AT3G02090 45 / 0.0003 MPPBETA Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) AT5G42390 45 / 0.0003 SPP stromal processing peptidase, Insulinase (Peptidase family M16) family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10042064 [exp] 1810 / 0 AT2G41790 1320 / 0.0 Insulinase (Peptidase family M16) family protein (.1) Lus10018072 [exp] 1599 / 0 AT2G41790 1451 / 0.0 Insulinase (Peptidase family M16) family protein (.1) Lus10042213 [exp] 432 / 2e-134 AT1G06900 1311 / 0.0 Insulinase (Peptidase family M16) family protein (.1) Lus10008604 [exp] 423 / 5e-131 AT1G06900 1271 / 0.0 Insulinase (Peptidase family M16) family protein (.1) Lus10004939 [exp] 48 / 3e-05 AT3G02090 869 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10040885 [exp] 48 / 4e-05 AT3G02090 869 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10040886 [exp] 47 / 7e-05 AT3G02090 869 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.006G050700 [exp] 1432 / 0 AT2G41790 1503 / 0.0 Insulinase (Peptidase family M16) family protein (.1) Potri.013G154600 [exp] 448 / 1e-140 AT1G06900 1461 / 0.0 Insulinase (Peptidase family M16) family protein (.1) Potri.004G118900 [exp] 51 / 4e-06 AT3G02090 822 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Potri.017G092400 [exp] 48 / 4e-05 AT3G02090 832 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Potri.002G235700 [exp] 46 / 0.0002 AT5G42390 1822 / 0.0 stromal processing peptidase, Insulinase (Peptidase family M16) family protein (.1) Potri.014G149200 [exp] 44 / 0.0006 AT5G42390 1815 / 0.0 stromal processing peptidase, Insulinase (Peptidase family M16) family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0094 [flax] [poplar] Peptidase_ME PF00675 [flax] [poplar] Peptidase_M16 Insulinase (Peptidase family M16) CL0094 [flax] [poplar] Peptidase_ME PF05193 [flax] [poplar] Peptidase_M16_C Peptidase M16 inactive domain
Representative CDS sequence Show only first row Show all	>Lus10018071 pacid=23147963 polypeptide=Lus10018071 locus=Lus10018071.g ID=Lus10018071.BGIv1.0 annot-version=v1.0 ATGGCTGTGTGCGGGGAAGAGATCTTGAAGCCTCGAACGGACAAGAGGGAGTACAGGAGGATCGTCCTCAGCAATTCTCTCCAAGTCCTGCTCATCAGCG ACCCCGAAACCGATAAGGCAATTTTGTGTTTCCCCAGCTTCCTTCCTCTTCTGTATGGCTACATTCTGTTCCAGACTTCGATCGTTCTTACTTCATTATT GTTTCAGGCTTCTGCTTCCATGAGCGTTGGCGTTGGGTCTTTCAGCGACCCCGTTGGACTCGAAGGCCTTGCTCATTTCCTCGAGCACATGCTGTTTTAT GCTAGTGAGAAGTACCCGTTGGAGGATAGTTACTCCAAGTACATCAGTGAGCATGGAGGGGGAACCAATGCTTTCACTGCTTGTGACCAAACCAACTATC ATTTTGATGTCAACAGTGATTGTTTTGAAGATGCATTGGACAGATTTTCTCAATTCTTTATTAGACCACTCATGTCAGCTGATGCTACGATGAGGGAAAG TAAAGCTGTTGATTCTGAGAATCAAAACAATTTGTTATCTGATGCTTGGAGAATGAGTCAGCTTCAAAGACATTTTAGCAAGGAAGGGCACCCATACCAC AAGTTCAATACAGGTAACTGGGATACTTTGGAGGTAAGACCAAAAGCAAAGGGCTTGGATACAAGACAAGAACTGATAAAATTCTATGAAGAGCATTATT CAGCCAACCTCATGCATCTTGTAATATATGCAAAAGAAAGCCTGGAAAAACTCCAAGGCATTGTTGAGGAGAAGTTCCAGGATATTCAAAACCACGAGAG GAGCTGCTTCTCGTTCCCTGATCAACCTTGCTCGCTAGAGCATTTACAGAAGGAGATATTTGGTTTACAACAGATACTCGTCAGAACGGTCCCTATAAAA CAAGGTCACGAGCTGAGAATTTCATGGCCGATAACCCCAGAGATTTTGTACTACAAGGGTGGACCTGTGAGGTATCTTAGCCATCTTATTGGTCATGAAG CAGAAGGATCTGTATTTTATGTATTGAAAACCTTGGGATGGGCTACGGACTTATATGCTAGTGAAGAAAACTGGACAAACGACTTCTCTTTCTTTGAAGT GGCAATAGACCTCACCGATACTGGTCATGAGCACATGCAAGATGTTGTTGGGCTGCTATTCAAGTACATAAGGCTCTTGCAGCAATCTGGTGTATGCAAA TGGATATTTGATGAGCTTGCAGCAGTTTGTCAGACCCAATTCCATTATCAAGACAAAGTCCCCCCCATTGATTATGTTGTCAGCATTGCTTCCACTATGC AAAAATATCCTCCAGAAGAGTGGCTTGTAGGGTCAGCTTTGCCTTCTGATTTCAGTCCAAGCATAATCCAAATGTATCTCAATCTACTTTCTCAGGAAAA CGTCCGTATCTTCTGGGTCTCAAAGAAATTTGAAGGTGAAACGAACATGGTGGAACCATGGTATGGAACTGCATATAACATTGAGAAAATCAGTAGCTCC ATGATTGAGGAATGGATGCAATCATCTCCGGAAAAACCTTTGCATCTTCCAATACATAATGTGTTTGTTCCCACCGACTTATCAATTAAGGCTGCAAAAG AGAAGGTTGTATCGCCAACTCTATTGAGGAGATCATCCAATTTGTCCTTGTGGTACAAGCCGGATACAACATTCCTTACTCCAAAGTCATACATAATGAT CGATTTCAGTTGCCCTCTTGCTAGTGTTTCACCTGCAGCGTCAGTGCTTACAGATATTTTTACTCGATTGTTAGTGGATTACTTGAATGAGTATGCCTAT TATGCGCAAGTTGCTGGTCTATACTATGGAATAGATAGCACAACCCGTGGTTTTCAGGTGACTGTGGTTGGTTATAATGATAAATTGAGGATTTTGTTGG GAACTATCATAGAGAAGATAGCTACATTCGTTGTGCGCCCTGACAGGTTTGCTGTGATAAAGGAAACTGCCATGAAGGAATATGAAAATTGCAAATTCCA TCAACCTTATGAACAGGCCAACTATTATTGCTATTACATACTGCAAGATCAAACATGGCCTTGGATGGAAGAATTTGAGGTTCTTTCTCAACTTCAGGCT GATGATCTTGCTAGTTTTGTACCAATGATGCTGTCAAGAGCCTTCTTGGAATGCTATGTAGCAGGAAACGTTGAACAAGATGAAGCGGAATCAATAAGTA ATCAAATCGAACATGCATTTTTCAAGGGTCTGAGCCCCCTATGCAAACCTTTGTTCTCCTCTCAACATCTGCCAAAAAGAGTTGTCCAGCTTGACATGGG CATCAGCTACATCTATCCAGTTGAAGGCTTAAATACAAAGGATGAGAATTCTGCTTTGCTGCATTATATTCAGGTTCACCGGGATGATTTCAAGCTGAAC GTTAAGCTCGAGCTTTTTGCTTTAATTGCAAAGCAAGCAGCTTTCCACCAGCTTAGATCAGTTGAGCAACTTGGTTACATCACTTCCCTCGCTGAGACGA ATAACTCTGGTATTCATGGACTACAGTTTATTATCCAATCGGCAGTGAAAGGTCCTGGGAAGATTGATTTGAGAGTCCAAGCTTTTCTTTTAATGTTCGA AACCAAATTGCGTGAGATGTCAGACGATGAATTCAAGAAACATGTGACTGCGTTGATCGACGCGAAACTCGAGAAGCTGCATAATTTGAGTGAAGAATCT TGGTATTACTGGAGCGAGATTTCATGCGGGACACTCAGGTTTGACAGGAAGGAATGCGAGGTTGCAGCGTTGAGAGAGCTGAGTAAAGATGAGTTGATAG ACTTCTTCAACGAGTATATAAGAGTAGATGCAGCTCAGAAGAGGTCTCTGAGCATACGGGTTTACGGGAGCCCGCATCTGGCTGAAATGGCAGCCGATAA GAGCGAAGAATCGTGCCGTCCTAACCGTGTTGAGATCGAGGACATCTGCAGTTTCAGAAGATCACAGCCGCTTTACGGTTCTTTCAGAGGCGGCCATGTT GCTGGCCACAAGAAGCTGTGA
AA sequence Show only first row Show all	>Lus10018071 pacid=23147963 polypeptide=Lus10018071 locus=Lus10018071.g ID=Lus10018071.BGIv1.0 annot-version=v1.0 MAVCGEEILKPRTDKREYRRIVLSNSLQVLLISDPETDKAILCFPSFLPLLYGYILFQTSIVLTSLLFQASASMSVGVGSFSDPVGLEGLAHFLEHMLFY ASEKYPLEDSYSKYISEHGGGTNAFTACDQTNYHFDVNSDCFEDALDRFSQFFIRPLMSADATMRESKAVDSENQNNLLSDAWRMSQLQRHFSKEGHPYH KFNTGNWDTLEVRPKAKGLDTRQELIKFYEEHYSANLMHLVIYAKESLEKLQGIVEEKFQDIQNHERSCFSFPDQPCSLEHLQKEIFGLQQILVRTVPIK QGHELRISWPITPEILYYKGGPVRYLSHLIGHEAEGSVFYVLKTLGWATDLYASEENWTNDFSFFEVAIDLTDTGHEHMQDVVGLLFKYIRLLQQSGVCK WIFDELAAVCQTQFHYQDKVPPIDYVVSIASTMQKYPPEEWLVGSALPSDFSPSIIQMYLNLLSQENVRIFWVSKKFEGETNMVEPWYGTAYNIEKISSS MIEEWMQSSPEKPLHLPIHNVFVPTDLSIKAAKEKVVSPTLLRRSSNLSLWYKPDTTFLTPKSYIMIDFSCPLASVSPAASVLTDIFTRLLVDYLNEYAY YAQVAGLYYGIDSTTRGFQVTVVGYNDKLRILLGTIIEKIATFVVRPDRFAVIKETAMKEYENCKFHQPYEQANYYCYYILQDQTWPWMEEFEVLSQLQA DDLASFVPMMLSRAFLECYVAGNVEQDEAESISNQIEHAFFKGLSPLCKPLFSSQHLPKRVVQLDMGISYIYPVEGLNTKDENSALLHYIQVHRDDFKLN VKLELFALIAKQAAFHQLRSVEQLGYITSLAETNNSGIHGLQFIIQSAVKGPGKIDLRVQAFLLMFETKLREMSDDEFKKHVTALIDAKLEKLHNLSEES WYYWSEISCGTLRFDRKECEVAALRELSKDELIDFFNEYIRVDAAQKRSLSIRVYGSPHLAEMAADKSEESCRPNRVEIEDICSFRRSQPLYGSFRGGHV AGHKKL

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G41790			Insulinase (Peptidase family M...		Lus10018071 [exp]	0	1
AT2G41790			Insulinase (Peptidase family M...		Lus10042064 [exp]	1.0	0.9413
AT2G18750			Calmodulin-binding protein (.1...		Lus10029852 [exp]	1.7	0.8549
AT1G78280			transferases, transferring gly...		Lus10036482 [exp]	2.0	0.8662
AT3G52820		ATPAP22, PAP22	purple acid phosphatase 22 (.1...		Lus10021378 [exp]	2.8	0.8250
AT5G55530			Calcium-dependent lipid-bindin...		Lus10043169 [exp]	6.7	0.8224
AT4G33620			Cysteine proteinases superfami...		Lus10020445 [exp]	7.4	0.8525
AT4G02020		SDG10, SWINGER,...	SWINGER, SET DOMAIN-CONTAINING...		Lus10041386 [exp]	9.4	0.8548
AT3G23700			Nucleic acid-binding proteins ...		Lus10021484 [exp]	9.8	0.8365
AT5G17460			unknown protein		Lus10009117 [exp]	10.6	0.8315
AT3G30841			Cofactor-independent phosphogl...		Lus10003060 [exp]	13.2	0.7835

Compare expression of checked genes

Lus10018071 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.