Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G41790 1452 / 0 Insulinase (Peptidase family M16) family protein (.1) AT3G57470 1238 / 0 Insulinase (Peptidase family M16) family protein (.1), Insulinase (Peptidase family M16) family protein (.2), Insulinase (Peptidase family M16) family protein (.3) AT1G06900 488 / 5e-156 Insulinase (Peptidase family M16) family protein (.1) AT3G57460 175 / 5e-48 catalytics;metal ion binding (.1) AT3G02090 50 / 5e-06 MPPBETA Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) AT5G42390 50 / 1e-05 SPP stromal processing peptidase, Insulinase (Peptidase family M16) family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10018071 [exp] 1612 / 0 AT2G41790 1377 / 0.0 Insulinase (Peptidase family M16) family protein (.1) Lus10042064 [exp] 1532 / 0 AT2G41790 1320 / 0.0 Insulinase (Peptidase family M16) family protein (.1) Lus10042213 [exp] 439 / 5e-137 AT1G06900 1311 / 0.0 Insulinase (Peptidase family M16) family protein (.1) Lus10008604 [exp] 432 / 9e-135 AT1G06900 1271 / 0.0 Insulinase (Peptidase family M16) family protein (.1) Lus10040885 [exp] 52 / 2e-06 AT3G02090 869 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10040886 [exp] 51 / 3e-06 AT3G02090 869 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10004939 [exp] 50 / 6e-06 AT3G02090 869 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10021970 [exp] 48 / 5e-05 AT5G42390 1122 / 0.0 stromal processing peptidase, Insulinase (Peptidase family M16) family protein (.1) Lus10041263 [exp] 48 / 6e-05 AT5G42390 1789 / 0.0 stromal processing peptidase, Insulinase (Peptidase family M16) family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.006G050700 [exp] 1567 / 0 AT2G41790 1503 / 0.0 Insulinase (Peptidase family M16) family protein (.1) Potri.013G154600 [exp] 470 / 1e-148 AT1G06900 1461 / 0.0 Insulinase (Peptidase family M16) family protein (.1) Potri.002G235700 [exp] 56 / 2e-07 AT5G42390 1822 / 0.0 stromal processing peptidase, Insulinase (Peptidase family M16) family protein (.1) Potri.004G118900 [exp] 55 / 2e-07 AT3G02090 822 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Potri.017G092400 [exp] 52 / 2e-06 AT3G02090 832 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Potri.014G149200 [exp] 51 / 5e-06 AT5G42390 1815 / 0.0 stromal processing peptidase, Insulinase (Peptidase family M16) family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0094 [flax] [poplar] Peptidase_ME PF00675 [flax] [poplar] Peptidase_M16 Insulinase (Peptidase family M16) CL0094 [flax] [poplar] Peptidase_ME PF05193 [flax] [poplar] Peptidase_M16_C Peptidase M16 inactive domain
Representative CDS sequence Show only first row Show all	>Lus10018072 pacid=23147875 polypeptide=Lus10018072 locus=Lus10018072.g ID=Lus10018072.BGIv1.0 annot-version=v1.0 ATGGCGCTGGGCACGGAGGAGATATTGAAGCCTCGAACGGACAAGAGGGAGTATAGAAGGATCGTCCTCAGCAATTCCCTCCAAGTTCTCCTCATAAGCG ATCCCGAAACCGATAAGGCAAGTTCGTTTTATCCTCCATCATCACATAATCCTTCCGTTTGTCTCCGCTTCTGTATGTGTTCAATCTCAATTACCAACAA GTTCGAGTTGTTTCAGGCTTCTGCTTCCATGAGCGTTGGCGTTGGTGCTTTCAGCGACCCCGTTGGACTCGAAGGCCTTGCCCATTTCCTTGAGCACATG CTGTTTTATGCTAGTGAGAAGTACCCATTGGAGGATTCTTATTCCAAGTACATCAGCGAGCACGGAGGGAGAACTAATGCTTTCACTGCTTCGGAGCAAA CCAACTACTATTTTGATGTCAATGGCGACTGTTTTGAAGATGCTCTGGACAGATTCGCGCAGTTCTTTATTAAACCACTCATGTCAGCTGATGCAACAAC AAGGGAAATAAAAGCTGTTGATTCTGAGAATCAAAAAAATTTGTTGTCTGACGCTTGGAGAATTAATCAGCTTCAGAAGCATCTAAGCGACGAGGGACAC CCGTTTCACAAGTTCAGTACAGGTAACTGGGATACTTTGGAGGTTAGACCAAAAGCGAAGGGCCTGGATACAAGACAAGAGCTGATAAAATTCTACGAAG AACATTATTCAGCCAATCTCATGCATCTCCTCATATATGCAAAAGAAAGCCTTGATAAGCTCCAAGGCATCATTGAGGAGAAATTCCAGGCTATTCAAAA CCATGAGAGGACCTGCTTCTCTTTCCCTGGTCAACCCTGCTCTTCAGAGCATTTACAGATACTAGTCAAAGTTGTCCCTATAAAACAAGGCCACAAGCTG CGAATTGTGTGGCCAATAACCCCAGGGATTCTTCACTACAAGGAAGGGCCAGCGAGGTATCTTGGTCATCTTGTTGGTCATGAAGCCGAAGGATCTGTAT TTTATGTATTGAAAACCTTGGGTGGGTATATGCTGTTTGAAGGATGGGCGACGAGTTTATCTGCTGGTGAAGGAGATTCGACTAAGGAGTTTTCCTTTTT TGAAGTGGGAATTGACCTCACAGATGCTGGCCATGAGCACATGCAAGATGTTGTCGGGTTGGTTTTCAGATACATTCGGCTCTTGCAGCAATCTGGTGTA TGCAAATGGATATTTGATGAGCTTGCAGCAGTTTGTCAGACAGAATTCCATTATCAGGACAAAATTCCTCCGATTGATTATGCAGTCAGAATTTCTTCTA ATATGCAAAAATATCCGCCAGCAGATTGGCTCGTAGGGTCATCCTTGCCTTCTAATTTCAATCCAAGCACAATCCAGATGTATCTTGACCAGCTCTCTCC AGACAATGTTCGTATCTTTTGGGTATCAAAGAAATTTGAAGGAGAAGCTAATATGGTGGAGCCATGGTATGGAACTGCATATGGTATCGATAAAATCACG AACTCCATGGTTGAGGGCTGGATGCAATCAACTCCCGACAAAAATCTGCATCTTCCAGCACCTAATGTGTTTGTCCCCACTGACTTGTCAATTAAGGACA CAAGAGAGAAGGTTATGTTGCCAACTCTATTGAAAAGGTCAACCTATTTGTCATTGTGGTACAAGCCGGATACAATGTTCTCTACCCCAAAGGCATACAT CAAGATTGATTTCAGTTGCCCTCTTGCCTGTGCTTCACCAGAAGCTTACGTGCTTACAGATATTTTTGCACGATTGTTAATGGATTACTTGAACGAATAT GCCTATTACGCACAAGTTGCTGGTTTATATTATGGGATAGGCAACACAAACAGTGGTTTTCAGGTGACTGTGCTTGGTTATAATCACAAATTGAGGATCT TGTTAGAAACGGTTATGGAGAAAATAGCCACATTCGAAGTCAACCCTGACAGGTTTATTGTTATCAAGGAAACAGTAACGAAGGAATATGAAAATTACAA GTTTCACCAACCTTATCAGCAGGCCATGTACTACTGCTCTTTAATTCTACAAGATCAAACATGGCCTTGGATGGAAAACCTTGAAGTTCTTTCTCAACTG CAGGCGGATGATCTTTCTAAGTTTGTACCAATGATGCTGTCAAGAGCTTTCTTGGAGTGTTACATAGCAGGAAACATCGAACGAGACGAGGCAGAATCAA TATGCGATCAAATTGAGCATGTCTTTTTCAAGTGTCCAAACCCCATATGCCAACCTTTGTTCTCCTCTCAACATCTAACTAATAGAGTTGTCAAACTTGA CCGGGGCATGACTTACATCTATCCAGCTGAAGGCTTAAATACAAAAGATGAGAATTCAGCTTTAGTGCATTATATTCAGGTTCATAGAGATGATTTTAAG CTGAATGTCAAGCTCCAGCTTTTTGCTTTAATTGCAAAGCAAGAAGCTTTCCACCAGCTTAGATCAGTCGAGCAACTTGGTTACATCACTGTCCTCATGC AGAGGAATGATTTTGGTATCCGTGGAGTACAGTTCATTATCCAATCAACCGCTAAAGGTCCTGGGCAGATTGATTTGAGAGTGAAGGCTTTTCTTAGCAT GTTCGAAAGTAAACTGCGTGAGATGTCCAATGATGAATTCAAGAACAATGTGAGTGCTTTGATCGACATGAAACTCGAGAAGCTAAAGAATTTAAGGGAA GAATCTTCATACTACTTGCGCGAGATTTCAGATGGGACACTCAAGTTTGACAGGAAGGAACACGAGGTGGCAGCCTTGCGAGAGCTAACTCAAGAGGAGT TGATAGAGTTCTTCGAGGAATACATAAAAGTGGATGCACCTCAGAAGAAGGTACTGAGCGTACGAGTGTACGGGAGCCCACATTCATCTGAGTTGGGAGC TGATAAGATCGCAGATGCTGCCCAACCAAACTGTGTTGAAATAAAGGACATCTTCACGTTCAGAAGATCACAGCCTCTGTACGGTTCGTTCAGAGGCGGA GTCGGCCACATGAAGCTGTAA
AA sequence Show only first row Show all	>Lus10018072 pacid=23147875 polypeptide=Lus10018072 locus=Lus10018072.g ID=Lus10018072.BGIv1.0 annot-version=v1.0 MALGTEEILKPRTDKREYRRIVLSNSLQVLLISDPETDKASSFYPPSSHNPSVCLRFCMCSISITNKFELFQASASMSVGVGAFSDPVGLEGLAHFLEHM LFYASEKYPLEDSYSKYISEHGGRTNAFTASEQTNYYFDVNGDCFEDALDRFAQFFIKPLMSADATTREIKAVDSENQKNLLSDAWRINQLQKHLSDEGH PFHKFSTGNWDTLEVRPKAKGLDTRQELIKFYEEHYSANLMHLLIYAKESLDKLQGIIEEKFQAIQNHERTCFSFPGQPCSSEHLQILVKVVPIKQGHKL RIVWPITPGILHYKEGPARYLGHLVGHEAEGSVFYVLKTLGGYMLFEGWATSLSAGEGDSTKEFSFFEVGIDLTDAGHEHMQDVVGLVFRYIRLLQQSGV CKWIFDELAAVCQTEFHYQDKIPPIDYAVRISSNMQKYPPADWLVGSSLPSNFNPSTIQMYLDQLSPDNVRIFWVSKKFEGEANMVEPWYGTAYGIDKIT NSMVEGWMQSTPDKNLHLPAPNVFVPTDLSIKDTREKVMLPTLLKRSTYLSLWYKPDTMFSTPKAYIKIDFSCPLACASPEAYVLTDIFARLLMDYLNEY AYYAQVAGLYYGIGNTNSGFQVTVLGYNHKLRILLETVMEKIATFEVNPDRFIVIKETVTKEYENYKFHQPYQQAMYYCSLILQDQTWPWMENLEVLSQL QADDLSKFVPMMLSRAFLECYIAGNIERDEAESICDQIEHVFFKCPNPICQPLFSSQHLTNRVVKLDRGMTYIYPAEGLNTKDENSALVHYIQVHRDDFK LNVKLQLFALIAKQEAFHQLRSVEQLGYITVLMQRNDFGIRGVQFIIQSTAKGPGQIDLRVKAFLSMFESKLREMSNDEFKNNVSALIDMKLEKLKNLRE ESSYYLREISDGTLKFDRKEHEVAALRELTQEELIEFFEEYIKVDAPQKKVLSVRVYGSPHSSELGADKIADAAQPNCVEIKDIFTFRRSQPLYGSFRGG VGHMKL

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G41790			Insulinase (Peptidase family M...		Lus10018072 [exp]	0	1
AT5G02310		PRT6, CER3	proteolysis 6 (.1)		Lus10025352 [exp]	8.0	0.9362
AT2G36850		CHOR, ATGSL8, A...	CHORUS, glucan synthase-like 8...		Lus10040892 [exp]	13.9	0.9339
AT1G55860		UPL1	ubiquitin-protein ligase 1 (.1...		Lus10002605 [exp]	17.1	0.9290
AT2G28290		CHR3, SYD	SPLAYED, CHROMATIN REMODELING ...		Lus10033980 [exp]	19.0	0.9280
AT3G61690			nucleotidyltransferases (.1)		Lus10004018 [exp]	21.2	0.9186
AT3G13330		PA200	proteasome activating protein ...		Lus10027111 [exp]	22.2	0.9146
AT5G24740			Protein of unknown function (D...		Lus10003835 [exp]	24.6	0.9272
AT2G28290		CHR3, SYD	SPLAYED, CHROMATIN REMODELING ...		Lus10012798 [exp]	25.2	0.9163
AT1G24706		EMB2793, AtTHO2	EMBRYO DEFECTIVE 2793, THO2 (....		Lus10035106 [exp]	27.1	0.9237
AT1G24706		EMB2793, AtTHO2	EMBRYO DEFECTIVE 2793, THO2 (....		Lus10031945 [exp]	27.4	0.9207

Compare expression of checked genes

Lus10018072 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.