Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G21770 108 / 1e-31 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) AT1G77540 102 / 4e-29 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10025670 [exp] 181 / 5e-60 AT1G21770 140 / 3e-44 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.005G178501 [exp] 123 / 2e-37 AT1G21770 145 / 2e-46 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10018168 pacid=23145210 polypeptide=Lus10018168 locus=Lus10018168.g ID=Lus10018168.BGIv1.0 annot-version=v1.0 ATGGCGGCATCAGCGGCGGCGATCGGAGAGGCGAAGACGGAGACGCCGAAGATAGTGCACAACGAGAAGGAAAGGAAGTTCGAGACGGAGGATAAGAAGG CTTACCTACAGTACGTGACGAGGGAAGGAGGCAGAGTTATGGATATCGTTCATACCTTCGTCCCTTCTTCCAAGCGAGGTCTAGGCATGGCTTCTCACCT CTGCACCGCTGCTTTCCACCACGCCGGATCCAATTCCATCTCCGTCATCCCCACTTGCTCCTACGTCTCCTTTCTGAGAAATCGAACCGGCCCAGGACTG ATTTTGTATAGTCTATTGAAGGCTACATCATTCATGGTCACTTGTTCATGGGAGTCGAATCTACTTGTTCCAGGTCACTTGTCACTAGATCGTCGTAACG AATGA
AA sequence Show only first row Show all	>Lus10018168 pacid=23145210 polypeptide=Lus10018168 locus=Lus10018168.g ID=Lus10018168.BGIv1.0 annot-version=v1.0 MAASAAAIGEAKTETPKIVHNEKERKFETEDKKAYLQYVTREGGRVMDIVHTFVPSSKRGLGMASHLCTAAFHHAGSNSISVIPTCSYVSFLRNRTGPGL ILYSLLKATSFMVTCSWESNLLVPGHLSLDRRNE

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G21770			Acyl-CoA N-acyltransferases (N...		Lus10018168 [exp]	0	1
AT2G37975			Yos1-like protein (.1)		Lus10017192 [exp]	2.2	0.8060
AT1G12260	NAC	ANAC007, VND4, ...	VASCULAR RELATED NAC-DOMAIN PR...		Lus10019638 [exp]	4.9	0.8156
AT5G49060			Heat shock protein DnaJ, N-ter...		Lus10006515 [exp]	5.5	0.8177
AT5G64816			unknown protein		Lus10009081 [exp]	5.7	0.8517
AT4G09550		ATGIP1	ARABIDOPSIS ATGCP3 INTERACTING...		Lus10040621 [exp]	6.6	0.7902
AT1G29850			double-stranded DNA-binding fa...		Lus10004540 [exp]	6.6	0.8321
AT3G10400		U11/U12-31K	U11/U12-31K, RNA recognition m...		Lus10038693 [exp]	18.9	0.7766
AT2G43780			unknown protein		Lus10035718 [exp]	19.0	0.7729
AT2G18196			Heavy metal transport/detoxifi...		Lus10010147 [exp]	20.0	0.7930
AT5G01075			Glycosyl hydrolase family 35 p...		Lus10018699 [exp]	21.8	0.7537

Compare expression of checked genes

Lus10018168 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.