Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10018313 pacid=23179266 polypeptide=Lus10018313 locus=Lus10018313.g ID=Lus10018313.BGIv1.0 annot-version=v1.0 ATGCTAAAGATCTCATCGAGTGAGCTCATTCATGATCAAACACTTCAGTTAAGAATGATAGTGCAGAGATCATTCACATGTTCAATACAGAGTTCAACTG ACATAGCCGATTATAAGCTAGGTGTGTCCACTGTCATTGTTGTTGATTGGAACCGAGGCAGATGGCGAGGGAGAGCTCAGCCTCCTGGCACTGCGACCTC TTCAGAGCCGTGCCACCGCTGGCGCAAAGGCTACGAACCGCCTCCGCCTCCTCCGGACACGCCACCGCCACCAGGCACCTGGCTAGGCCGAGATTCAGGT GGCGGCAGGCGCTGTCCCTTCCCCGACCAAAAGGCATGCGGCGGTGGCACTCGAGGAGCGCCTGCTGCAACCTCTCGCACGGGATCCCCGGCGATCCCGA TTCGGATGGTCGCATCGTCTGGATTGAATTTGGTGATTTCCGTCGACAGCGAGAGGAACGGTGGCGAGTCGGGAGGATGTGATCGTTTTGATGGAACGGA GGCGATTAGGATGCCGTGTTCGTTTGTGGAAATTAATGAGTTTTGTCGCTTGTTCTCTTTGGTTGCTTGA
AA sequence Show only first row Show all	>Lus10018313 pacid=23179266 polypeptide=Lus10018313 locus=Lus10018313.g ID=Lus10018313.BGIv1.0 annot-version=v1.0 MLKISSSELIHDQTLQLRMIVQRSFTCSIQSSTDIADYKLGVSTVIVVDWNRGRWRGRAQPPGTATSSEPCHRWRKGYEPPPPPPDTPPPPGTWLGRDSG GGRRCPFPDQKACGGGTRGAPAATSRTGSPAIPIRMVASSGLNLVISVDSERNGGESGGCDRFDGTEAIRMPCSFVEINEFCRLFSLVA

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10018313 [exp]	0	1
AT3G60330		AHA7	H\(+\)-ATPase 7, H\(+\)-ATPase...		Lus10042905 [exp]	2.2	0.9445
AT3G19000			2-oxoglutarate (2OG) and Fe(II...		Lus10023850 [exp]	4.0	0.9291
AT1G13440		GAPC2, GAPC-2	GLYCERALDEHYDE-3-PHOSPHATE DEH...		Lus10022332 [exp]	4.9	0.9065
					Lus10031873 [exp]	6.9	0.9164
AT2G39530			Uncharacterised protein family...		Lus10031303 [exp]	8.1	0.9107
AT5G13150		ATEXO70C1	exocyst subunit exo70 family p...		Lus10037048 [exp]	10.0	0.9122
AT3G18760			Translation elongation factor...		Lus10038301 [exp]	10.2	0.8808
AT1G02520		MDR8, ABCB11, P...	multi-drug resistance 8, ATP-b...		Lus10011976 [exp]	11.0	0.8054
AT4G35980			unknown protein		Lus10028436 [exp]	11.4	0.8855
					Lus10004778 [exp]	11.5	0.9028

Compare expression of checked genes

Lus10018313 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.