Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G35150 371 / 1e-128 EXL7, EXL1 EXORDIUM LIKE 7, EXORDIUM like 1 (.1) AT2G17230 364 / 2e-125 EXL5 EXORDIUM like 5 (.1) AT5G51550 320 / 2e-108 EXL3 EXORDIUM like 3 (.1) AT5G64260 139 / 2e-38 EXL2, MSJ1.10 EXORDIUM like 2 (.1) AT1G35140 138 / 4e-38 EXL1, EXL7, PHI-1 PHOSPHATE-INDUCED 1, EXORDIUM like 1, Phosphate-responsive 1 family protein (.1) AT4G08950 132 / 7e-36 EXO EXORDIUM, Phosphate-responsive 1 family protein (.1) AT5G09440 112 / 1e-28 EXL4 EXORDIUM like 4 (.1) AT3G02970 75 / 5e-15 EXL6 EXORDIUM like 6 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10017138 [exp] 357 / 5e-125 AT2G35150 240 / 9e-80 EXORDIUM LIKE 7, EXORDIUM like 1 (.1) Lus10013834 [exp] 344 / 1e-117 AT2G17230 496 / 4e-177 EXORDIUM like 5 (.1) Lus10026548 [exp] 341 / 1e-116 AT2G17230 499 / 2e-178 EXORDIUM like 5 (.1) Lus10031130 [exp] 313 / 1e-105 AT5G51550 526 / 0.0 EXORDIUM like 3 (.1) Lus10031709 [exp] 213 / 2e-67 AT5G51550 377 / 2e-132 EXORDIUM like 3 (.1) Lus10017139 [exp] 199 / 9e-64 AT2G35150 149 / 1e-44 EXORDIUM LIKE 7, EXORDIUM like 1 (.1) Lus10017050 [exp] 140 / 9e-39 AT4G08950 404 / 2e-142 EXORDIUM, Phosphate-responsive 1 family protein (.1) Lus10021370 [exp] 140 / 2e-38 AT4G08950 403 / 1e-141 EXORDIUM, Phosphate-responsive 1 family protein (.1) Lus10010352 [exp] 128 / 4e-34 AT5G64260 378 / 2e-132 EXORDIUM like 2 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.015G122100 [exp] 431 / 4e-152 AT2G35150 377 / 3e-131 EXORDIUM LIKE 7, EXORDIUM like 1 (.1) Potri.009G167800 [exp] 349 / 8e-120 AT2G17230 499 / 1e-178 EXORDIUM like 5 (.1) Potri.004G206600 [exp] 349 / 1e-119 AT2G17230 481 / 4e-171 EXORDIUM like 5 (.1) Potri.012G128100 [exp] 320 / 2e-108 AT5G51550 521 / 0.0 EXORDIUM like 3 (.1) Potri.015G129700 [exp] 319 / 6e-108 AT5G51550 521 / 0.0 EXORDIUM like 3 (.1) Potri.014G126000 [exp] 147 / 2e-41 AT5G64260 240 / 9e-78 EXORDIUM like 2 (.1) Potri.005G163500 [exp] 145 / 6e-41 AT4G08950 430 / 2e-152 EXORDIUM, Phosphate-responsive 1 family protein (.1) Potri.005G163700 [exp] 145 / 6e-41 AT4G08950 431 / 4e-153 EXORDIUM, Phosphate-responsive 1 family protein (.1) Potri.002G098600 [exp] 142 / 1e-39 AT4G08950 404 / 4e-142 EXORDIUM, Phosphate-responsive 1 family protein (.1) Potri.005G163600 [exp] 142 / 1e-39 AT4G08950 438 / 1e-155 EXORDIUM, Phosphate-responsive 1 family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF04674 [flax] [poplar] Phi_1 Phosphate-induced protein 1 conserved region
Representative CDS sequence Show only first row Show all	>Lus10018314 pacid=23179372 polypeptide=Lus10018314 locus=Lus10018314.g ID=Lus10018314.BGIv1.0 annot-version=v1.0 ATGCAGAACCAGAAGAAACTCCTCCATTACTTCCTCTCCATCTCCTTCTTCTTCCTTGTGTCTTCTCCAGCATGGAGCAGCAGCCAAGAACAAGACAAAG GATTCACATTCAGGCAATCGAAGAACTACGAAGGATCATCTGACCTGATCGATGTAAACTACCACATGGGTCCTGTTCTAGCCTCCCCTGTCAGTCTCTA CATCATCTGGTACGGCCAATGGAGTCCACCCCATCAATCCACCATCAGAGATTTCATCTCCTCTATTTCCGCACCAACTTCTTCTTCTTCTTCTACCATT CGCCACCCTTCCGTTTCAGACTGGTGGCGGACGGTTCGCCTCTACACGGACCAGACAGGATCCAACATCACCGACAAAATCACCCTCGTCGGCGAGCTCG CCGACTCAGGCTACTCCCACGGCCGTGACCTGACCCGGCTGTCGATGCAATCCATCATCAAGACCGCCGTATCCGGCGGCGGAATGCCTCTCAACTCTAA AGACGGGCTCTATTTAGTGCTGACTTCGCACGACGTTGCCGTTCAGGACTTTTGTCGAGCAGTTTGCGGGTTCCATTACTTCACCTTCCCGTACCTCGTC GGAGCCTCCGTGCCGTACGCCTGGGTCGGGTACAGCGGCACGCAGTGCCCCGGGATGTGCGCCTACCCGTTCGCCTGGCCGACTTACTCCGGCGGAAAGC CGCCGCCGAACAACAACATTATGAAGTCCCCCAACGGAGACGCTGGAATCGACGGGATGATCAGCGTCATCGCTCACGAGCTGGCGGAGGTGACGAGCAA CCCGCTTGTCAACTCCTGGTACGCCGGTGATGACCCGATGAATCCGACGGAGATCGCGGACTTGTGCTTGGGAGTCTACGGCACTGGAGCCGGCGGCGGG TACGTTGGCCAGGTGATGAAGGACGCCTGGGGAGACGGGTACAACGTCAATGGAGTTAAGGGGCGGAAGTTTCTGGTGCAGTGGGTTTGGAATCCGGCTA GGAGAAGTTGCTTTGGACCAAATGCTAGGGATTAA
AA sequence Show only first row Show all	>Lus10018314 pacid=23179372 polypeptide=Lus10018314 locus=Lus10018314.g ID=Lus10018314.BGIv1.0 annot-version=v1.0 MQNQKKLLHYFLSISFFFLVSSPAWSSSQEQDKGFTFRQSKNYEGSSDLIDVNYHMGPVLASPVSLYIIWYGQWSPPHQSTIRDFISSISAPTSSSSSTI RHPSVSDWWRTVRLYTDQTGSNITDKITLVGELADSGYSHGRDLTRLSMQSIIKTAVSGGGMPLNSKDGLYLVLTSHDVAVQDFCRAVCGFHYFTFPYLV GASVPYAWVGYSGTQCPGMCAYPFAWPTYSGGKPPPNNNIMKSPNGDAGIDGMISVIAHELAEVTSNPLVNSWYAGDDPMNPTEIADLCLGVYGTGAGGG YVGQVMKDAWGDGYNVNGVKGRKFLVQWVWNPARRSCFGPNARD

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G35150		EXL7, EXL1	EXORDIUM LIKE 7, EXORDIUM like...		Lus10018314 [exp]	0	1
AT1G01300			Eukaryotic aspartyl protease f...		Lus10003999 [exp]	1.7	0.8190
AT5G24318			O-Glycosyl hydrolases family 1...		Lus10005459 [exp]	9.5	0.7779
AT5G50290			unknown protein		Lus10042105 [exp]	14.9	0.8092
AT5G52882			P-loop containing nucleoside t...		Lus10039309 [exp]	16.3	0.7632
AT2G29630		PY, THIC	PYRIMIDINE REQUIRING, thiaminC...		Lus10018211 [exp]	19.2	0.7899
AT5G22090			Protein of unknown function (D...		Lus10004098 [exp]	22.1	0.7787
AT2G27770			Plant protein of unknown funct...		Lus10009405 [exp]	23.5	0.7171
AT5G52882			P-loop containing nucleoside t...		Lus10027551 [exp]	24.7	0.7465
AT4G17960			unknown protein		Lus10040087 [exp]	25.1	0.7501
AT1G27660	bHLH	bHLH110	basic helix-loop-helix (bHLH) ...		Lus10033198 [exp]	25.6	0.7403

Compare expression of checked genes

Lus10018314 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.