Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G21270 899 / 0 KATAP, ATK1 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA A PROTEIN, KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA A, kinesin 1 (.1) AT4G05190 874 / 0 ATK5 kinesin 5 (.1) AT5G54670 768 / 0 KATC, ATK3 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA C, kinesin 3 (.1) AT4G27180 753 / 0 KATB, ATK2 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA B, kinesin 2 (.1) AT1G72250 309 / 2e-90 Di-glucose binding protein with Kinesin motor domain (.1.2) AT5G27550 293 / 1e-87 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT2G22610 296 / 2e-86 Di-glucose binding protein with Kinesin motor domain (.1.2) AT1G73860 295 / 3e-86 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT1G63640 291 / 9e-85 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1), P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.2) AT5G27000 286 / 2e-83 KATD, ATK4 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA D, kinesin 4 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10007629 [exp] 1436 / 0 AT4G21270 975 / 0.0 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA A PROTEIN, KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA A, kinesin 1 (.1) Lus10035838 [exp] 781 / 0 AT5G54670 1076 / 0.0 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA C, kinesin 3 (.1) Lus10036621 [exp] 779 / 0 AT5G54670 1075 / 0.0 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA C, kinesin 3 (.1) Lus10005582 [exp] 289 / 1e-83 AT1G72250 1109 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Lus10013714 [exp] 289 / 2e-83 AT1G72250 1098 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Lus10035954 [exp] 284 / 4e-82 AT2G22610 1302 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Lus10025708 [exp] 281 / 6e-81 AT2G22610 1238 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Lus10032264 [exp] 280 / 3e-80 AT1G63640 991 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1), P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.2) Lus10029865 [exp] 275 / 4e-79 AT5G27000 1014 / 0.0 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA D, kinesin 4 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.011G031200 [exp] 1070 / 0 AT4G21270 1109 / 0.0 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA A PROTEIN, KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA A, kinesin 1 (.1) Potri.004G031600 [exp] 1036 / 0 AT4G21270 1076 / 0.0 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA A PROTEIN, KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA A, kinesin 1 (.1) Potri.001G416300 [exp] 806 / 0 AT5G54670 1090 / 0.0 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA C, kinesin 3 (.1) Potri.011G131900 [exp] 789 / 0 AT5G54670 1058 / 0.0 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA C, kinesin 3 (.1) Potri.013G020700 [exp] 293 / 3e-87 AT5G27550 862 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Potri.011G140000 [exp] 299 / 6e-87 AT1G72250 1201 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Potri.001G104000 [exp] 294 / 2e-85 AT1G63640 1102 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1), P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.2) Potri.001G436200 [exp] 294 / 4e-85 AT1G72250 1248 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Potri.005G030271 [exp] 286 / 5e-85 AT5G27550 865 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Potri.003G127800 [exp] 291 / 2e-84 AT1G63640 1065 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1), P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0023 [flax] [poplar] P-loop_NTPase PF00225 [flax] [poplar] Kinesin Kinesin motor domain
Representative CDS sequence Show only first row Show all	>Lus10018384 pacid=23162093 polypeptide=Lus10018384 locus=Lus10018384.g ID=Lus10018384.BGIv1.0 annot-version=v1.0 ATGGCTTCTAGGAATCAGAACAGGCCTCCGAGGAGTCCTGCGGCGAAGCGGGATGGTGGCGATGGGGTTTCTGTGGATAAGCGTAGAAGAGTTGGAGTTG GAGCAGGGAGAACTGGGGGTCCTGACCGGAAGCCGCTCGGTTCGGTTAACAAGAAGCTGGAAGGAGCTAGCTCGACGGCTGCAAATGAAGTGTTGGAGAA TAGCGTGATTGGGTTTACGAAGGAGGAAGTTGAGGCGTTAGTGAATGAGAGGCCTAAGATGAAGAAATTCGATCACAAGGGGAATTTGGAAGTGATGACT GAGTTTAACGGTAGGCTCAAGATTTGTATCAAATGGTGTCAGAAACAAGAGGAAAAGCATGTCGAGGAGGAGAGTAAGCTCCGAAGTGCTTTGGAAGTTT CAGAGAAAAGATGCGTTGATATTGAGGCGGAAATGAGATGTAAGGAAGAGACGTATAGAACATCCATGGCAGAGTTGAGTAAAGAGAATGCATCTTTGCG AGAGAAACTTTCTAAGGAAGGATCAGAGAAGCTGGCTGCCATTCAGAGCCATAGGAAGGAGCACGAGGCACGAATCACATTAGAGACTGTGCAGGCATCT CTCTCAAAGGACCTTGAGAAAGCACATCAAGACATTTTAGTGGCCAACCAAAGGGCAGCCGCGCTTGATGCTGACTATAAGAGATCGCAGGAGTACAATC AGAACTTGCAGCAGCATATTAGCAAAGTGCTGGCTGACCTGAATGCAGAACGTGAATCGTTGAAACGAGTGGAGAAGGACAAGTCTACAATAGTGGAGAG CCTTAGTGCCTTGAGAGGCCACTATCATTCATTGCAGGAGCAACTCACTATGTCTAAAACTTCTCGAGATGAGGCAGTCAGTCAGAAAAATTCACTGGAC AATGAACTAAAATGCGTTCGTGGCGATCTCCAACAAGCAAGAGATGACCGTGATCGACAGTTGGCGCAGGTTCAAGCCCTGACAGCGGACTTATTGAAAT ACCAAGAGAACTCCGGCAAATTTCTTGCTGAGATAGATGTGGTTACTGAGAAGACAAAGTCATTAGAGGAAACATGTTCTTCACAACGGCAGCATATAAG TTTGCTGGAGCAGAAACTGTCTGCAGCGAATGAGAAGTTAAAGATATTGGACTTATCTGCTGGTGAGGCAAGGACAGGATATGAAGAACAGAGAAAAATA GTGACTGACTTGCAGGATCGACTAGCAGATGCAGAACATAAACTCCTTGAAGGAGAGAAGTTGAGGAAGAAGTTGCATAACACCATTTTGGAACTAAAAG GAAACATACGTGTGTTCTGTAGAGTTCGCCCTGTCTTACCAGATGAGAGCTATCGAAACGATACCCAAGTCATCTCTTATCCCGGTTCTCTCGAATCTCT TGGCCGTGGCATTGATGTCGTCCAAAATGGTCAGAAGTATCCCTTCACATTCGATAAGGTGTTTAGTCATGATGCTTCACAGCAAGATGTCTTTGTGGAA ATTTCACAGTTGGTTCAGAGTGCCCTTGATGGCTATAAGGTCTGCATATTTGCTTATGGTCAGACGGGATCAGGAAAAACTTACACCATGATGGGAAAGC CTGAAGCACACGACTTGAAGGGGCTAATACCTCGCTCCCTTGAACAAGTATTTGAAGCTAGTCAGTCCCTTATGGCCCAAGGGTGGAAGTACAAAATGCA GGCATCAATGCTTGAGATATATAACGAAACAATCCGGGATTTGCTGTCACCAAGCTCTTCCTCTTGCACCGATACTAATGCTCCTGCCAAGCAATATAAA ATCCAACATGACACCAGTGGAAATACACATGTAACAGACCTTACCGTCGTTGATGTCAGCAGCATATCCGAAGTATCATCTCTACTCCGAAAGGCTGCTC AAAGCAGATCTGTTGGGAGAACGAACATGAACGAGCAGTCCTCGAGAAGCCACTTCGTCTTCACACTGCGGATTTATGGGGTAAACGAGGGCACTGACCA ACAGTTACAAGGCGTCCTCAACCTGATCGATCTAGCTGGAAGCGAACGGCTCTCGAAAAGTGGTGCAACTGGCGATCGGTTGAAGGAAACCCAAGCCATT AACAAAAGCTTATCATGCTTGGCGAATGTGATCTTCTCTTTAGCCAAGAAAGAGGATCATGTTCCCTTCAGAGACTCCAAGTTGACTCATCTTCTTCAGC CTTGTTTAGGTGGCGAATCGAAGACGCTAATGTTCGTGAACGTCTCTCCTGACCCGTCCTCAGTCGGTGAGTCATTATGCTCGCTGAAGTTTGCAGCCAG GGTCAACGCCTGCGAAATTGGAGTGGCTAGGCGTCAGATGAACTTGAGACTTCCTGCTGTTGATTCGCGGCTGAGCTATGGGTAA
AA sequence Show only first row Show all	>Lus10018384 pacid=23162093 polypeptide=Lus10018384 locus=Lus10018384.g ID=Lus10018384.BGIv1.0 annot-version=v1.0 MASRNQNRPPRSPAAKRDGGDGVSVDKRRRVGVGAGRTGGPDRKPLGSVNKKLEGASSTAANEVLENSVIGFTKEEVEALVNERPKMKKFDHKGNLEVMT EFNGRLKICIKWCQKQEEKHVEEESKLRSALEVSEKRCVDIEAEMRCKEETYRTSMAELSKENASLREKLSKEGSEKLAAIQSHRKEHEARITLETVQAS LSKDLEKAHQDILVANQRAAALDADYKRSQEYNQNLQQHISKVLADLNAERESLKRVEKDKSTIVESLSALRGHYHSLQEQLTMSKTSRDEAVSQKNSLD NELKCVRGDLQQARDDRDRQLAQVQALTADLLKYQENSGKFLAEIDVVTEKTKSLEETCSSQRQHISLLEQKLSAANEKLKILDLSAGEARTGYEEQRKI VTDLQDRLADAEHKLLEGEKLRKKLHNTILELKGNIRVFCRVRPVLPDESYRNDTQVISYPGSLESLGRGIDVVQNGQKYPFTFDKVFSHDASQQDVFVE ISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGKPEAHDLKGLIPRSLEQVFEASQSLMAQGWKYKMQASMLEIYNETIRDLLSPSSSSCTDTNAPAKQYK IQHDTSGNTHVTDLTVVDVSSISEVSSLLRKAAQSRSVGRTNMNEQSSRSHFVFTLRIYGVNEGTDQQLQGVLNLIDLAGSERLSKSGATGDRLKETQAI NKSLSCLANVIFSLAKKEDHVPFRDSKLTHLLQPCLGGESKTLMFVNVSPDPSSVGESLCSLKFAARVNACEIGVARRQMNLRLPAVDSRLSYG

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G21270		KATAP, ATK1	KINESIN-LIKE PROTEIN IN ARABI...		Lus10018384 [exp]	0	1
AT2G36200			P-loop containing nucleoside t...		Lus10021340 [exp]	1.0	0.9836
AT1G59540		ZCF125	P-loop containing nucleoside t...		Lus10018661 [exp]	1.4	0.9836
AT2G20635			ATP binding;protein kinases;pr...		Lus10017714 [exp]	2.4	0.9834
AT2G37420			ATP binding microtubule motor ...		Lus10024429 [exp]	2.8	0.9812
AT2G07170			ARM repeat superfamily protein...		Lus10027590 [exp]	3.2	0.9802
AT1G08560		KN, ATSYP111, S...	KNOLLE, syntaxin of plants 11...		Lus10021988 [exp]	4.0	0.9761
AT5G48600		ATSMC4, SMC4, A...	ARABIDOPSIS THALIANA STRUCTURA...		Lus10005240 [exp]	4.9	0.9768
AT2G37420			ATP binding microtubule motor ...		Lus10025304 [exp]	6.0	0.9721
AT5G13840		FZR3	FIZZY-related 3 (.1.2)		Lus10040282 [exp]	6.0	0.9742
AT5G13960		SDG33, KYP, SUV...	SET DOMAIN PROTEIN 33, KRYPTON...		Lus10041515 [exp]	6.8	0.9649

Compare expression of checked genes

Lus10018384 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.