Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G20900 676 / 0 DGK5, ATDGK5 diacylglycerol kinase 5 (.1.2.3.4) AT4G28130 565 / 0 DGK6, ATDGK6 diacylglycerol kinase 6 (.1) AT5G57690 203 / 3e-59 ATDGK4 diacylglycerol kinase 4 (.1) AT4G30340 198 / 3e-57 ATDGK7 diacylglycerol kinase 7 (.1) AT2G18730 196 / 1e-56 ATDGK3 diacylglycerol kinase 3 (.1) AT5G63770 132 / 4e-33 ATDGK2 diacylglycerol kinase 2 (.1.2) AT5G07920 106 / 4e-24 ATDGK1, DGK1 DIACYLGLYCEROL KINASE 1, diacylglycerol kinase1 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10039747 [exp] 824 / 0 AT2G20900 751 / 0.0 diacylglycerol kinase 5 (.1.2.3.4) Lus10031612 [exp] 707 / 0 AT2G20900 719 / 0.0 diacylglycerol kinase 5 (.1.2.3.4) Lus10033732 [exp] 702 / 0 AT2G20900 730 / 0.0 diacylglycerol kinase 5 (.1.2.3.4) Lus10019987 [exp] 224 / 5e-67 AT4G30340 713 / 0.0 diacylglycerol kinase 7 (.1) Lus10015514 [exp] 223 / 8e-67 AT4G30340 707 / 0.0 diacylglycerol kinase 7 (.1) Lus10006991 [exp] 206 / 4e-60 AT2G18730 677 / 0.0 diacylglycerol kinase 3 (.1) Lus10008907 [exp] 121 / 1e-31 AT2G18730 322 / 1e-109 diacylglycerol kinase 3 (.1) Lus10010896 [exp] 120 / 8e-29 AT5G63770 955 / 0.0 diacylglycerol kinase 2 (.1.2) Lus10012719 [exp] 120 / 1e-28 AT5G63770 957 / 0.0 diacylglycerol kinase 2 (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.013G148500 [exp] 689 / 0 AT2G20900 765 / 0.0 diacylglycerol kinase 5 (.1.2.3.4) Potri.001G408500 [exp] 624 / 0 AT2G20900 695 / 0.0 diacylglycerol kinase 5 (.1.2.3.4) Potri.018G096700 [exp] 216 / 4e-64 AT2G18730 702 / 0.0 diacylglycerol kinase 3 (.1) Potri.006G174700 [exp] 210 / 5e-62 AT4G30340 670 / 0.0 diacylglycerol kinase 7 (.1) Potri.007G097900 [exp] 129 / 8e-32 AT5G63770 933 / 0.0 diacylglycerol kinase 2 (.1.2) Potri.005G070900 [exp] 126 / 1e-30 AT5G63770 897 / 0.0 diacylglycerol kinase 2 (.1.2) Potri.012G066300 [exp] 112 / 7e-26 AT5G07920 1154 / 0.0 DIACYLGLYCEROL KINASE 1, diacylglycerol kinase1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00609 [flax] [poplar] DAGK_acc Diacylglycerol kinase accessory domain CL0240 [flax] [poplar] PFK PF00781 [flax] [poplar] DAGK_cat Diacylglycerol kinase catalytic domain
Representative CDS sequence Show only first row Show all	>Lus10018527 pacid=23180412 polypeptide=Lus10018527 locus=Lus10018527.g ID=Lus10018527.BGIv1.0 annot-version=v1.0 ATGCAGATGGAGGCATCGTCGTCAATGGATTCAAATGCCGAGTCGAGTCTTCTGAAGGAATTCTACATTCCGACGTATGTACTTGTAGCGGAATCGGAGG CGGTGAGCGTTACTGATTTTCCTCAGTGTCCTGTTTTGGTGTTCATCAACTCCAAAAGCGGTGGTCAGCTCGGTGGAGATCTTCTCCTAACCTATCGATC CATTCTCAATGACCATCAGGTTTTCGATGTAGGGGAGGAGACTCCTGATAGTGTGCTGAAAAGGATATATGTGAACATTGAGAAGCTCAAGTCCGGCGGT GATGGGTTTGCTGCTAAGATTCAGGAGAGGTTGAAAATCATTGTTGCAGGTGGTGATGGAACTGCTGGTTGGCTTCTTGGTGTTGTTTGTGATCTTAAGT TCCCTCATCCTCCTCCAATTGCAACTGTGCCTTTGGGAACTGGAAATAATCTTCCATTTGCCTTTGGCTGGGGAAAGAGGAATCCTGGGACAGATCGTCA GTCTGTAGTTTCCTTTCTGAAGGAGGTCATGAAAGCAAAGGAAATGAAGATTGACAACTGGCATATTATGATGAGGATGAAGACCCCGAAAGAAGGTTCT TGTGAACCGATTGCACCTCTCGAGCTACCGCAATCTCTGCATACTGTTCACCGTGTCTCTTCTTCAGACGAATTCAACAGGGAAGGTTATACAACATTTC GTGGCGGATTCTGGAACTACTTTAGCTTGGGCATGGATGCTCAAATATCCTATGCATTTCATTCTGAGAGGAAACTGCATCCTGAAAAATTCAAGAATCA GTTGGCTAATCAGAATAGCCAGCTTGGCGAAGGTGAAAGTCATGAAAACACCAGGGAAGTGGGAAGATCTATCTATATCCAACAGGTTGGATTTAAGTGT CTCTTAGCGAATCTCTTCAGGATGGAAAACAGAGAGAATCTTTACCGTAACGTAGTCCTCATTGCTGGTTCTCCTCTGCTCCACAGCATAAGATCAATAG TGTGCCTCAACTTGCCCAGCTTCTCCGGCGGACTGAATCCTTGGGGTACACCAAGCACTTGGAAACGCCGTGATCGAGACTTGACGCCACCTTATGTCGA CGATGGGCGAATCGAGGTTGTTGGGTTCAGAGACGCATGGCATGGACTCGTCTTGCTTGCTCCAAAAGGAAAAGGGCACGGAACTCGCCTCGCACAGGCA CACAGAATCAGGTTCGAGTTCCACAAAGGCGTTGCGGATCAAACGTTCATGAGGATTGACGGCGAGCCCTGGAAGCAACCGTTGCCAACCGATGATGACA TGGTAGTTGTGGAGATCTCTCACCTAGGTCAGGTGAATATACTAGCCACAAATGATTGTAGGTCGAAGAGTATGACCGATCCTTCAACTCCAAGTCACCC TGGCCGAGATGAAGACGACCAAGATAGCGAGGAAGATTGCGGAGAAGAATTCAGGAAGTTCGGTGCAGCCGACACATTCAAGATGCCAGATGAGTTCGAC ATTTCCCATCTCAGTTAA
AA sequence Show only first row Show all	>Lus10018527 pacid=23180412 polypeptide=Lus10018527 locus=Lus10018527.g ID=Lus10018527.BGIv1.0 annot-version=v1.0 MQMEASSSMDSNAESSLLKEFYIPTYVLVAESEAVSVTDFPQCPVLVFINSKSGGQLGGDLLLTYRSILNDHQVFDVGEETPDSVLKRIYVNIEKLKSGG DGFAAKIQERLKIIVAGGDGTAGWLLGVVCDLKFPHPPPIATVPLGTGNNLPFAFGWGKRNPGTDRQSVVSFLKEVMKAKEMKIDNWHIMMRMKTPKEGS CEPIAPLELPQSLHTVHRVSSSDEFNREGYTTFRGGFWNYFSLGMDAQISYAFHSERKLHPEKFKNQLANQNSQLGEGESHENTREVGRSIYIQQVGFKC LLANLFRMENRENLYRNVVLIAGSPLLHSIRSIVCLNLPSFSGGLNPWGTPSTWKRRDRDLTPPYVDDGRIEVVGFRDAWHGLVLLAPKGKGHGTRLAQA HRIRFEFHKGVADQTFMRIDGEPWKQPLPTDDDMVVVEISHLGQVNILATNDCRSKSMTDPSTPSHPGRDEDDQDSEEDCGEEFRKFGAADTFKMPDEFD ISHLS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G20900		DGK5, ATDGK5	diacylglycerol kinase 5 (.1.2....		Lus10018527 [exp]	0	1
					Lus10032375 [exp]	3.5	0.8860
AT3G06530			ARM repeat superfamily protein...		Lus10026144 [exp]	7.7	0.8747
AT4G08250	GRAS		GRAS family transcription fact...		Lus10022664 [exp]	10.2	0.8098
AT1G65480		FT	FLOWERING LOCUS T, PEBP (phosp...		Lus10004452 [exp]	12.6	0.8671
AT2G04740			ankyrin repeat family protein ...		Lus10006408 [exp]	13.5	0.8014
					Lus10008409 [exp]	13.6	0.8624
AT4G25440	C3HZnF	ZFWD1	zinc finger WD40 repeat protei...		Lus10032062 [exp]	13.9	0.7610
AT5G23940		PEL3, DCR, EMB3...	PERMEABLE LEAVES3, EMBRYO DEFE...		Lus10027500 [exp]	14.4	0.8397
					Lus10002291 [exp]	15.3	0.8455
					Lus10022993 [exp]	21.6	0.8289

Compare expression of checked genes

Lus10018527 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.