Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G28390 202 / 2e-64 ATAAC3, AAC3 ADP/ATP carrier 3 (.1) AT3G08580 175 / 4e-54 AAC1 ADP/ATP carrier 1 (.1.2) AT5G13490 173 / 3e-53 AAC2 ADP/ATP carrier 2 (.1.2) AT5G17400 122 / 2e-34 ER-ANT1 endoplasmic reticulum-adenine nucleotide transporter 1 (.1) AT5G56450 90 / 7e-22 PM-ANT Mitochondrial substrate carrier family protein (.1) AT2G37890 64 / 2e-12 Mitochondrial substrate carrier family protein (.1) AT4G26180 57 / 5e-10 Mitochondrial substrate carrier family protein (.1) AT3G53940 57 / 7e-10 Mitochondrial substrate carrier family protein (.1) AT3G55640 52 / 2e-08 Mitochondrial substrate carrier family protein (.1) AT4G01100 50 / 1e-07 ADNT1 adenine nucleotide transporter 1 (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10039847 [exp] 303 / 2e-104 AT4G28390 545 / 0.0 ADP/ATP carrier 3 (.1) Lus10019702 [exp] 185 / 4e-58 AT5G13490 612 / 0.0 ADP/ATP carrier 2 (.1.2) Lus10031276 [exp] 185 / 6e-58 AT5G13490 582 / 0.0 ADP/ATP carrier 2 (.1.2) Lus10031843 [exp] 182 / 4e-57 AT5G13490 580 / 0.0 ADP/ATP carrier 2 (.1.2) Lus10016418 [exp] 180 / 6e-56 AT5G13490 612 / 0.0 ADP/ATP carrier 2 (.1.2) Lus10019701 [exp] 172 / 6e-53 AT5G13490 607 / 0.0 ADP/ATP carrier 2 (.1.2) Lus10016417 [exp] 172 / 9e-53 AT5G13490 602 / 0.0 ADP/ATP carrier 2 (.1.2) Lus10034658 [exp] 125 / 2e-35 AT5G17400 491 / 5e-177 endoplasmic reticulum-adenine nucleotide transporter 1 (.1) Lus10017874 [exp] 118 / 6e-33 AT5G17400 473 / 5e-170 endoplasmic reticulum-adenine nucleotide transporter 1 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.017G012800 [exp] 206 / 5e-66 AT4G28390 575 / 0.0 ADP/ATP carrier 3 (.1) Potri.007G139100 [exp] 204 / 2e-65 AT4G28390 572 / 0.0 ADP/ATP carrier 3 (.1) Potri.003G204600 [exp] 186 / 2e-58 AT5G13490 582 / 0.0 ADP/ATP carrier 2 (.1.2) Potri.001G019400 [exp] 184 / 2e-57 AT5G13490 580 / 0.0 ADP/ATP carrier 2 (.1.2) Potri.001G267800 [exp] 182 / 1e-56 AT3G08580 592 / 0.0 ADP/ATP carrier 1 (.1.2) Potri.009G062200 [exp] 176 / 3e-54 AT5G13490 625 / 0.0 ADP/ATP carrier 2 (.1.2) Potri.012G062500 [exp] 102 / 2e-26 AT5G17400 416 / 5e-147 endoplasmic reticulum-adenine nucleotide transporter 1 (.1) Potri.006G227100 [exp] 94 / 1e-23 AT5G56450 462 / 4e-165 Mitochondrial substrate carrier family protein (.1) Potri.006G226300 [exp] 60 / 5e-11 AT1G14560 476 / 7e-170 Mitochondrial substrate carrier family protein (.1) Potri.006G153600 [exp] 57 / 6e-10 AT4G26180 475 / 4e-170 Mitochondrial substrate carrier family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00153 [flax] [poplar] Mito_carr Mitochondrial carrier protein
Representative CDS sequence Show only first row Show all	>Lus10018611 pacid=23180388 polypeptide=Lus10018611 locus=Lus10018611.g ID=Lus10018611.BGIv1.0 annot-version=v1.0 ATGGCGGATGGATCAAATCATCCATCAGTTTTTCAGAAGATGTATGTGGAATGGTCCCTTGATCCGAGTCCGAGACCTTCTCCTAATGTAGAAAGCAGGG GTGTGAATGGGAATGCTGCTAATGGAATGCAGGGCACTGGTGTGGAAGCTTCTCCAAACCATTCTTCCATGCCAGCAGTAGTGCCTGCTGAGAAAGGTCT TGGTGCGTTCATGACTGATTTCCTCATGGGAGGAGTTTCCGCCGCAGTTTCCAAGACTGCAGCTGCTCCGATCGAGCGTGTCAAGCTCTTGATTCAGAAT CAAGACGAGATGATTAAAGCTGGCCGTCTTTCCCATCCGTATAGGGGCATCGGTGACTGTTTTGCTAGAACCATGAAAGACGAAGGAGTGCTTGCTCTTT GGAGAGGCAACCCGGCCAATGTTATCAGATACTTCCCTACTCAGGCACTAAACTTTGCATTCAAAGATTTACATCAAGAGGTTGTTTAA
AA sequence Show only first row Show all	>Lus10018611 pacid=23180388 polypeptide=Lus10018611 locus=Lus10018611.g ID=Lus10018611.BGIv1.0 annot-version=v1.0 MADGSNHPSVFQKMYVEWSLDPSPRPSPNVESRGVNGNAANGMQGTGVEASPNHSSMPAVVPAEKGLGAFMTDFLMGGVSAAVSKTAAAPIERVKLLIQN QDEMIKAGRLSHPYRGIGDCFARTMKDEGVLALWRGNPANVIRYFPTQALNFAFKDLHQEVV

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G28390		ATAAC3, AAC3	ADP/ATP carrier 3 (.1)		Lus10018611 [exp]	0	1
AT5G13490		AAC2	ADP/ATP carrier 2 (.1.2)		Lus10018612 [exp]	2.8	0.9080
AT1G67550		URE	urease (.1)		Lus10015814 [exp]	3.7	0.9137
AT1G02260			Divalent ion symporter (.1)		Lus10027497 [exp]	7.9	0.9080
AT5G26990			Drought-responsive family prot...		Lus10013990 [exp]	8.9	0.8829
AT4G14720	ZIM	TIFY4B, PPD2	PEAPOD 2, TIFY domain/Divergen...		Lus10000490 [exp]	12.0	0.8973
AT5G25140		CYP71B13	"cytochrome P450, family 71, s...		Lus10018263 [exp]	13.0	0.9115
AT3G27530		MAG4, GC6	MAIGO 4, golgin candidate 6 (....		Lus10032089 [exp]	14.3	0.8973
AT3G11040		AtENGase85B	Endo-beta-N-acetyglucosaminida...		Lus10007526 [exp]	18.8	0.8846
AT2G29200		APUM1	pumilio 1 (.1)		Lus10000516 [exp]	20.1	0.8886
AT4G00830		LIF2	LHP1-Interacting Factor 2, RNA...		Lus10002689 [exp]	25.0	0.8835

Compare expression of checked genes

Lus10018611 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.