Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G30910 432 / 2e-153 Molybdenum cofactor sulfurase family protein (.1) AT5G44720 416 / 5e-147 Molybdenum cofactor sulfurase family protein (.1.2) AT1G16540 116 / 9e-29 ACI2, ABA3, SIR3, LOS5, ATABA3 SIRTINOL RESISTANT 3, LOW OSMOTIC STRESS 5, ALTERED CHLOROPLAST IMPORT 2, ABA DEFICIENT 3, molybdenum cofactor sulfurase (LOS5) (ABA3) (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10007754 [exp] 623 / 0 AT1G30910 435 / 1e-154 Molybdenum cofactor sulfurase family protein (.1) Lus10031190 [exp] 112 / 3e-27 AT1G16540 1012 / 0.0 SIRTINOL RESISTANT 3, LOW OSMOTIC STRESS 5, ALTERED CHLOROPLAST IMPORT 2, ABA DEFICIENT 3, molybdenum cofactor sulfurase (LOS5) (ABA3) (.1) Lus10031768 [exp] 110 / 9e-27 AT1G16540 1021 / 0.0 SIRTINOL RESISTANT 3, LOW OSMOTIC STRESS 5, ALTERED CHLOROPLAST IMPORT 2, ABA DEFICIENT 3, molybdenum cofactor sulfurase (LOS5) (ABA3) (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.003G154900 [exp] 365 / 4e-127 AT1G30910 332 / 3e-114 Molybdenum cofactor sulfurase family protein (.1) Potri.007G066400 [exp] 110 / 1e-26 AT1G16540 1071 / 0.0 SIRTINOL RESISTANT 3, LOW OSMOTIC STRESS 5, ALTERED CHLOROPLAST IMPORT 2, ABA DEFICIENT 3, molybdenum cofactor sulfurase (LOS5) (ABA3) (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF03473 [flax] [poplar] MOSC MOSC domain PF03476 [flax] [poplar] MOSC_N MOSC N-terminal beta barrel domain
Representative CDS sequence Show only first row Show all	>Lus10018692 pacid=23176211 polypeptide=Lus10018692 locus=Lus10018692.g ID=Lus10018692.BGIv1.0 annot-version=v1.0 ATGACAGAGAAGGAGGGATCAGTTACTGCTGCAACAGTGTCTTCCATTTTCATCTATCCGATCAAATCATGCCGCGGTATCTCCGTTCCTCACGCCCCAC TCACTCCTACCGGGTTTCGTTGGGATCGGAATTGGCTGGTGGTTAACTACAAAGGGAGGGCATACACTCAAAGGGTTGAGCCTAAGCTTGCCCTCGTTGA GATACAGCTACCAGATGAAGCATTCATGGACGGCTGGGAACCTACCAGAAACTCCTTTATGGTCATAAAGGCTCCTGGGATGGATACCCTTCAGATTCCG CTGACGAAACCCCAAGATGTGGCAGAGGGAGTATCAGTATGGGAGTGGTCTGGTTCTGCACTTGATGAGGGATCTGAACCAGCTAAATGGTTCTCTGATT ACATTGGGAAACCCAGTCGCCTTGTTCGTTTCGATGCAGGATCAGAAGTGAGGCCTGTGGATCCCGAGTATGGCCCCGGGCATAATATTATGTTTTCTGA CCTCTTTCCCTACATGGTTGCATCTCAGGAGTCTCTGGATGCACTTAATAATCTTCTCACTGAACCTGTTCCTATTAATCGTTTTCGACCCAACATACTG GTTAATGGATGTGAACCTTTTTCGGAGGACTTGTGGACTGAGATTAGGATAAACAAGACGACATTTGGAGGTGTGAGGCTGTGCTCCCGCTGCAAGATAC CAACAGTTAATCAGGACACTGGTGTTGCTGGGTCCGAGCCAAATGCAACCCTGATGCAGTTCAGATCTGATAAAGTTCTGCGTCCAGACAAGAAACAACA AGGGAAGGTTTACTTCGGCCAAAACTTAGTCTGGAAGGATAACGATTCAGGGGCAGGGAAAGGAAATGTTATGAAAGTAGGAGATCCTGTTGTTGTACTC CAAAAGGTCTCCTCTTCTGCTGAAGCTGTAGCATGA
AA sequence Show only first row Show all	>Lus10018692 pacid=23176211 polypeptide=Lus10018692 locus=Lus10018692.g ID=Lus10018692.BGIv1.0 annot-version=v1.0 MTEKEGSVTAATVSSIFIYPIKSCRGISVPHAPLTPTGFRWDRNWLVVNYKGRAYTQRVEPKLALVEIQLPDEAFMDGWEPTRNSFMVIKAPGMDTLQIP LTKPQDVAEGVSVWEWSGSALDEGSEPAKWFSDYIGKPSRLVRFDAGSEVRPVDPEYGPGHNIMFSDLFPYMVASQESLDALNNLLTEPVPINRFRPNIL VNGCEPFSEDLWTEIRINKTTFGGVRLCSRCKIPTVNQDTGVAGSEPNATLMQFRSDKVLRPDKKQQGKVYFGQNLVWKDNDSGAGKGNVMKVGDPVVVL QKVSSSAEAVA

---

DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

---

Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G30910			Molybdenum cofactor sulfurase ...		Lus10018692 [exp]	0	1
AT1G30910			Molybdenum cofactor sulfurase ...		Lus10007754 [exp]	1.7	0.8593
AT1G64620	DOF	AtDof1,8	Dof-type zinc finger DNA-bindi...		Lus10023032 [exp]	3.2	0.8555
AT5G51980	C3HZnF		Transducin/WD40 repeat-like su...		Lus10034716 [exp]	4.2	0.8530
AT1G03750		SWI2, SNF2, CHR...	CHROMATIN REMODELING 9, switch...		Lus10017712 [exp]	7.0	0.8325
AT5G40880			WD-40 repeat family protein / ...		Lus10014612 [exp]	7.4	0.8173
AT5G53020			Ribonuclease P protein subunit...		Lus10022396 [exp]	7.7	0.8131
AT4G25440	C3HZnF	ZFWD1	zinc finger WD40 repeat protei...		Lus10021655 [exp]	8.2	0.8416
AT3G26300		CYP71B34	"cytochrome P450, family 71, s...		Lus10011499 [exp]	8.4	0.8216
AT4G34180			Cyclase family protein (.1)		Lus10001508 [exp]	9.2	0.8355
AT1G29690		CAD1	constitutively activated cell ...		Lus10025153 [exp]	12.0	0.8271

Compare expression of checked genes

Lus10018692 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.