Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10024837 [exp] 83 / 2e-19 AT1G03055 229 / 1e-73 unknown protein
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10018751 pacid=23176218 polypeptide=Lus10018751 locus=Lus10018751.g ID=Lus10018751.BGIv1.0 annot-version=v1.0 ATGGTAGAGATCAATGCCGCTTTGTTCCTCCCCGAGTCAGAATCGTCATTTGACTGGCATTACGATCGGACAACTTTCCGCTCCGGTTGCATTGCCACAA ACTTCTGTTTGCTTCACTCCGATTGCGAACTTCAATGGCGGCAACTGATAGAATCGAAGTCCGAGTTTGGAAGGAGCGTCGACATTCCAGTCCTACTTCC TCGATCTCTAGCCGCATTCAATCGTATCCTTTCTGATAACTTCGCTGAAGAGAAAGAACTGAGGCTTGTACGGATGAACAATAACGAGAATGTGCGAATT TATTATCTAAGGAGTTCAGTGTTTCTCACGAGCAGTTTGAAGGAGGAGGATTGCGTGTTTCATTCGAATGATTTCGACAACTGGCCTAGCACGGGAAGTT TAGAACCTTTAGAGTGA
AA sequence Show only first row Show all	>Lus10018751 pacid=23176218 polypeptide=Lus10018751 locus=Lus10018751.g ID=Lus10018751.BGIv1.0 annot-version=v1.0 MVEINAALFLPESESSFDWHYDRTTFRSGCIATNFCLLHSDCELQWRQLIESKSEFGRSVDIPVLLPRSLAAFNRILSDNFAEEKELRLVRMNNNENVRI YYLRSSVFLTSSLKEEDCVFHSNDFDNWPSTGSLEPLE

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10018751 [exp]	0	1
AT3G19184	B3		AP2/B3-like transcriptional fa...		Lus10014044 [exp]	4.1	0.7942
AT1G71750		HGPT	Hypoxanthine-guanine phosphori...		Lus10024262 [exp]	6.0	0.7516
AT3G59330			Eukaryotic protein of unknown ...		Lus10002279 [exp]	9.7	0.7744
					Lus10037800 [exp]	11.7	0.7026
AT3G05950			RmlC-like cupins superfamily p...		Lus10035278 [exp]	12.8	0.7291
AT5G57880		MPS1, ATPRD2	ARABIDOPSIS THALIANA PUTATIVE ...		Lus10010784 [exp]	14.7	0.7779
AT1G03220			Eukaryotic aspartyl protease f...		Lus10041224 [exp]	17.5	0.7769
AT5G52860		ABCG8	ATP-binding cassette G8, ABC-2...		Lus10039305 [exp]	18.4	0.7798
					Lus10019746 [exp]	21.5	0.7005
AT5G02070			Protein kinase family protein ...		Lus10020667 [exp]	25.0	0.7176

Compare expression of checked genes

Lus10018751 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.