Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G43670 620 / 0 FINS1, AtcFBP FRUCTOSE INSENSITIVE 1, Arabidopsis thaliana cytosolic fructose-1,6-bisphosphatase, Inositol monophosphatase family protein (.1) AT3G54050 346 / 1e-117 HCEF1 high cyclic electron flow 1 (.1.2) AT5G64380 233 / 1e-73 Inositol monophosphatase family protein (.1) AT3G55800 98 / 1e-22 SBPASE sedoheptulose-bisphosphatase (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10028580 [exp] 693 / 0 AT1G43670 618 / 0.0 FRUCTOSE INSENSITIVE 1, Arabidopsis thaliana cytosolic fructose-1,6-bisphosphatase, Inositol monophosphatase family protein (.1) Lus10027748 [exp] 342 / 3e-116 AT3G54050 655 / 0.0 high cyclic electron flow 1 (.1.2) Lus10035545 [exp] 342 / 3e-116 AT3G54050 655 / 0.0 high cyclic electron flow 1 (.1.2) Lus10021115 [exp] 327 / 4e-110 AT3G54050 647 / 0.0 high cyclic electron flow 1 (.1.2) Lus10017195 [exp] 309 / 4e-103 AT3G54050 601 / 0.0 high cyclic electron flow 1 (.1.2) Lus10007061 [exp] 230 / 3e-72 AT5G64380 549 / 0.0 Inositol monophosphatase family protein (.1) Lus10020433 [exp] 218 / 7e-68 AT5G64380 528 / 0.0 Inositol monophosphatase family protein (.1) Lus10040228 [exp] 99 / 4e-23 AT3G55800 611 / 0.0 sedoheptulose-bisphosphatase (.1) Lus10028261 [exp] 99 / 4e-23 AT3G55800 611 / 0.0 sedoheptulose-bisphosphatase (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.005G191400 [exp] 645 / 0 AT1G43670 609 / 0.0 FRUCTOSE INSENSITIVE 1, Arabidopsis thaliana cytosolic fructose-1,6-bisphosphatase, Inositol monophosphatase family protein (.1) Potri.002G069000 [exp] 632 / 0 AT1G43670 619 / 0.0 FRUCTOSE INSENSITIVE 1, Arabidopsis thaliana cytosolic fructose-1,6-bisphosphatase, Inositol monophosphatase family protein (.1) Potri.016G106900 [exp] 340 / 2e-115 AT3G54050 619 / 0.0 high cyclic electron flow 1 (.1.2) Potri.016G109000 [exp] 324 / 6e-109 AT3G54050 526 / 0.0 high cyclic electron flow 1 (.1.2) Potri.017G042900 [exp] 232 / 3e-73 AT5G64380 552 / 0.0 Inositol monophosphatase family protein (.1) Potri.010G193300 [exp] 98 / 8e-23 AT3G55800 625 / 0.0 sedoheptulose-bisphosphatase (.1) Potri.008G063800 [exp] 98 / 9e-23 AT3G55800 629 / 0.0 sedoheptulose-bisphosphatase (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0171 [flax] [poplar] Phospoesterase PF00316 [flax] [poplar] FBPase Fructose-1-6-bisphosphatase, N-terminal domain
Representative CDS sequence Show only first row Show all	>Lus10018885 pacid=23144766 polypeptide=Lus10018885 locus=Lus10018885.g ID=Lus10018885.BGIv1.0 annot-version=v1.0 ATGGATCATGCGGCGGATGCGATGAGGACCGATTTGATGACGATAACTCGGTACGTGCTGAATGAACAGACGAAGCACCCCGAGTCTCGCGGCGACTTCA CCATCCTCCTCAGCCACATTGTCCTCGGCTGCAAGTTCGTCTGCTCCTCCGTTAACAAGGCTGGTCTGGCAAAGTTGATTGGGCTTGCTGGGGAGACCAA TGTTCAAGGTGAAGAGCAGAAGAAACTGGATGTGCTCTCTAATGAAGTCTTCATCAAAGCCTTAGTAAGCAGCGGCAGAACTTGCATTCTTGTGTCTGAG GAAGATGAAGAAGCAACCTTTGTGGAACCAGCCTTGCGCGGCAAGTACTGTGTTGTTTTCGATCCGTTGGACGGATCCTCCAACATCGACTGTGGAGTCT CCATTGGAACGATATTTGGGATTTACATGATCAAAGATGGCTCTGAGCCAACTGTGGGGGATGCATTGCAGCCTGGGAAGAACATGGTTGCAGCCGGTTA CTGCATGTATGGAAGCTCTTGCACGTTAGTGTTGAGCACGGGGAAAGGAGTCAATGGGTTCACTCTTGATCCGTCTCTTGGGGAGTTCATACTCACTCAC CCTGATATTAAGATTCCAAAAAAGGGAAAGATCTATTCGGTCAACGAAGGGAATGCCAAGAATTGGGATGGTCCAACGGCCAAGTATGTGGAGAGCTGCA AGTACCCTAAAGATGGTTCCTCTCCAAAGTCTCTTAGATACATTGGAAGTATGGTTGCTGATGTGCACCGGACATTGCTCTATGGAGGCATATTCTTGTA CCCAGCTGACAAGAAGAGTCCCAACGGAAAACTTCGTGTGTTGTATGAAGTCTTCCCAATGTCGTTCCTGATGGAGCAAGCTGGAGGCCAAGCTTTCACC GGCAAGGAAAGGGCACTAGACTTGGTCCCGACGAAGATACACGAGCGATCTCCCATATTCTTGGGAAGTTCGGACGACGTGGAGGAAATCAAAGCCCTAT ATGCTGCTGAGGCAAAGAACTAA
AA sequence Show only first row Show all	>Lus10018885 pacid=23144766 polypeptide=Lus10018885 locus=Lus10018885.g ID=Lus10018885.BGIv1.0 annot-version=v1.0 MDHAADAMRTDLMTITRYVLNEQTKHPESRGDFTILLSHIVLGCKFVCSSVNKAGLAKLIGLAGETNVQGEEQKKLDVLSNEVFIKALVSSGRTCILVSE EDEEATFVEPALRGKYCVVFDPLDGSSNIDCGVSIGTIFGIYMIKDGSEPTVGDALQPGKNMVAAGYCMYGSSCTLVLSTGKGVNGFTLDPSLGEFILTH PDIKIPKKGKIYSVNEGNAKNWDGPTAKYVESCKYPKDGSSPKSLRYIGSMVADVHRTLLYGGIFLYPADKKSPNGKLRVLYEVFPMSFLMEQAGGQAFT GKERALDLVPTKIHERSPIFLGSSDDVEEIKALYAAEAKN

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G43670		FINS1, AtcFBP	FRUCTOSE INSENSITIVE 1, Arabid...		Lus10018885 [exp]	0	1
AT3G27820		ATMDAR4	monodehydroascorbate reductase...		Lus10022260 [exp]	2.0	0.8650
AT4G09760			Protein kinase superfamily pro...		Lus10028728 [exp]	3.0	0.8636
AT1G55280			Lipase/lipooxygenase, PLAT/LH2...		Lus10039181 [exp]	6.6	0.8715
AT1G62760			Plant invertase/pectin methyle...		Lus10024595 [exp]	7.5	0.8263
AT4G35090		CAT2	catalase 2 (.1.2)		Lus10012258 [exp]	8.4	0.8522
AT4G01940		ATCNFU1, NFU1	NFU domain protein 1 (.1)		Lus10009999 [exp]	9.5	0.8004
AT5G06130			chaperone protein dnaJ-related...		Lus10014223 [exp]	11.7	0.8398
AT1G63900		DAL1	DIAP1-like protein 1, E3 Ubiqu...		Lus10027994 [exp]	14.7	0.8566
AT1G01050		ATPPA1	pyrophosphorylase 1 (.1)		Lus10014292 [exp]	19.1	0.8460
AT5G40760		G6PD6	glucose-6-phosphate dehydrogen...		Lus10014614 [exp]	19.8	0.8192

Compare expression of checked genes

Lus10018885 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.