Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G14730 157 / 1e-48 Cytochrome b561/ferric reductase transmembrane protein family (.1) AT4G25570 91 / 2e-22 ACYB-2 Cytochrome b561/ferric reductase transmembrane protein family (.1) AT5G38630 89 / 7e-22 ACYB-1 cytochrome B561-1 (.1) AT1G26100 52 / 5e-08 Cytochrome b561/ferric reductase transmembrane protein family (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10034427 [exp] 232 / 9e-78 AT1G14730 280 / 4e-96 Cytochrome b561/ferric reductase transmembrane protein family (.1) Lus10031935 [exp] 203 / 2e-66 AT1G14730 284 / 8e-98 Cytochrome b561/ferric reductase transmembrane protein family (.1) Lus10027461 [exp] 98 / 7e-25 AT4G25570 287 / 3e-98 Cytochrome b561/ferric reductase transmembrane protein family (.1) Lus10039216 [exp] 97 / 1e-24 AT4G25570 305 / 6e-106 Cytochrome b561/ferric reductase transmembrane protein family (.1) Lus10038866 [exp] 86 / 2e-20 AT4G25570 326 / 3e-114 Cytochrome b561/ferric reductase transmembrane protein family (.1) Lus10014986 [exp] 83 / 4e-19 AT4G25570 331 / 8e-115 Cytochrome b561/ferric reductase transmembrane protein family (.1) Lus10028996 [exp] 82 / 4e-19 AT4G25570 145 / 4e-43 Cytochrome b561/ferric reductase transmembrane protein family (.1) Lus10003682 [exp] 78 / 2e-17 AT4G25570 131 / 1e-37 Cytochrome b561/ferric reductase transmembrane protein family (.1) Lus10003076 [exp] 57 / 4e-10 AT5G38630 281 / 2e-97 cytochrome B561-1 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.010G102400 [exp] 167 / 2e-52 AT1G14730 271 / 7e-93 Cytochrome b561/ferric reductase transmembrane protein family (.1) Potri.008G138300 [exp] 167 / 4e-52 AT1G14730 252 / 2e-85 Cytochrome b561/ferric reductase transmembrane protein family (.1) Potri.015G143700 [exp] 104 / 7e-28 AT4G25570 297 / 8e-103 Cytochrome b561/ferric reductase transmembrane protein family (.1) Potri.012G141000 [exp] 96 / 2e-24 AT4G25570 254 / 5e-86 Cytochrome b561/ferric reductase transmembrane protein family (.1) Potri.004G103800 [exp] 91 / 2e-22 AT5G38630 301 / 2e-104 cytochrome B561-1 (.1) Potri.017G111700 [exp] 86 / 2e-20 AT5G38630 321 / 2e-112 cytochrome B561-1 (.1) Potri.008G115300 [exp] 84 / 5e-20 AT5G38630 272 / 7e-93 cytochrome B561-1 (.1) Potri.008G115200 [exp] 53 / 1e-08 AT1G26100 270 / 6e-92 Cytochrome b561/ferric reductase transmembrane protein family (.1) Potri.010G131100 [exp] 52 / 4e-08 AT1G26100 270 / 6e-92 Cytochrome b561/ferric reductase transmembrane protein family (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0328 [flax] [poplar] 2heme_cytochrom PF03188 [flax] [poplar] Cytochrom_B561 Eukaryotic cytochrome b561
Representative CDS sequence Show only first row Show all	>Lus10019135 pacid=23141823 polypeptide=Lus10019135 locus=Lus10019135.g ID=Lus10019135.BGIv1.0 annot-version=v1.0 ATGGAGACGGGGGTGGTATATAGGAGGTCTGCATCTGGGCTGACGGTAGGTGCTCACGTGTTTGGGATACTGGGGATCATACTGATGCTGGTGTGGTTGC TTCACTTCCGTGAAGGGATTGAGTATGATTCTGACAACCCGGCTCGCGTCTTCAATGTTCATCCATTCCTCATGTTCTGCGGATTCATCTTCCTCGTTGG TCAAGCGATGATGGCATACAAGTCGGTGCCGGCGGCGAGAGAAGCACAGAAGGTAGTGCACATGGTCCTAAACCTGGTCGGAATAGCTGTAGGGATCGCC GGAATATCGGCGGCGTTCAGGTTCCACGACATGGTGAACGCGGAGGATATGTACAGCCTCCATTCCTGGATAGGACTCACAACGTTTCTGTCTGGTGGGA CTCCAGTGGCTCCTCGGATTCTTCACCTACATGTTCCCCAAGGCCAGCCAGGGGACGCGTGGCAGCATGATGGCGAGGCACATCAGCGGCGGCAGGACCC TGCTGTACATGGCAATCTGCGCCGCCCTCACCGGAGTCATGGAGAAGTCCAGCATCCTGCGGCTCCAAGGATACGGCGAGGCTAG
AA sequence Show only first row Show all	>Lus10019135 pacid=23141823 polypeptide=Lus10019135 locus=Lus10019135.g ID=Lus10019135.BGIv1.0 annot-version=v1.0 METGVVYRRSASGLTVGAHVFGILGIILMLVWLLHFREGIEYDSDNPARVFNVHPFLMFCGFIFLVGQAMMAYKSVPAAREAQKVVHMVLNLVGIAVGIA GISAAFRFHDMVNAEDMYSLHSWIGLTTFLSGGTPVAPRILHLHVPQGQPGDAWQHDGEAHQRRQDPAVHGNLRRPHRSHGEVQHPAAPRIRRG

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G14730			Cytochrome b561/ferric reducta...		Lus10019135 [exp]	0	1
AT1G23530			unknown protein		Lus10030608 [exp]	1.7	0.9739
AT5G46530			AWPM-19-like family protein (....		Lus10004587 [exp]	2.0	0.9650
AT5G18970			AWPM-19-like family protein (....		Lus10001116 [exp]	3.0	0.9605
AT1G75720			Plant protein of unknown funct...		Lus10024335 [exp]	3.5	0.9508
AT5G67550			unknown protein		Lus10011544 [exp]	3.9	0.9588
AT5G04890		RTM2	RESTRICTED TEV MOVEMENT 2, HSP...		Lus10028874 [exp]	4.9	0.9604
AT5G24620			Pathogenesis-related thaumatin...		Lus10032914 [exp]	6.9	0.9562
AT1G14730			Cytochrome b561/ferric reducta...		Lus10031935 [exp]	9.4	0.9516
AT1G60360			RING/U-box superfamily protein...		Lus10022967 [exp]	9.5	0.9517
AT1G75260			oxidoreductases, acting on NAD...		Lus10033210 [exp]	9.9	0.9557

Compare expression of checked genes

Lus10019135 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.