Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G44280 365 / 1e-123 Major facilitator superfamily protein (.1.2.3) AT3G60070 263 / 7e-84 Major facilitator superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10034394 [exp] 602 / 0 AT3G60070 592 / 0.0 Major facilitator superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G232100 [exp] 435 / 3e-151 AT3G60070 648 / 0.0 Major facilitator superfamily protein (.1) Potri.009G024600 [exp] 432 / 6e-150 AT2G44280 653 / 0.0 Major facilitator superfamily protein (.1.2.3)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10019162 pacid=23141710 polypeptide=Lus10019162 locus=Lus10019162.g ID=Lus10019162.BGIv1.0 annot-version=v1.0 ATGGGTGACAATGAGATTGGGGATGAAGAGGAACTTTCATATGCTAAATCTGATGGGGGAAGACGGTCGGTTTTCTTTTATGGTGTTGGCCACATGCTGA ATGATATAACTTCCTCCTGCTGGTTTACTTATCTCTTATTGTTCTTGGCAGATATCGGATTGTCCCCGAGGGCTGCTGCAATGGTGATGCTCTCGGGGCA GGTTGCGGATGGATTTGCTACCGTATTTGTCGGAGAACTGATAGACAGGTTCGGAAATTTCAAAGTATGGCATGGTGCTGGGTCGGTTTTAGTTGCGGTT TCATTTTCCTCTGTTTTTGGAGGTTGTTTACCATGCCGATTCTTCAGTACTGGTTCTGCAGTGGTGGAAACCATCTCATATAGTGTATTTGCTGCAATCT TTAACGTGGGCTGGGCTGCTACTCAAGTTTCGCACATGTCCATGGTCAATTGCATCTCACTGAATTCAACTACTAGAGTAGTCCTGACCAGCTGCCGGAA TGCATTTACAATGGTTGCAAATCTCAGCCTTTATGCAATTGCGTTGGTAGTGTTCAATATAATTAGAGGAAAGTCGCATGCTGATATTGAGAATCAGGCA TACCTTGCTTTCTATGTGATTCAAGATTTGCACATGGGCCAGTCAGCTAAAGCTTTGGTTCCTGCAATCATCTACGTCAGCAGCTTCATTGTCTCTATCA TGATGCAGGAAGTATCATGGACTGGCCGGCGCCTAAAAGCATACTTTTCTGTTGGTGGAATCCTTTGGGTTCTTTGTGGAGCAACGATCATTCTCTTACC TTGCAGGATGAGTGTTTTTATGTACATCATATCAGGATTTATCGGCATAGCAAACGCACTGATGATGGTAACTGCAGTAAGCATGCAAAGTGTCCTAGTG GGTTCAGATTTCAATGGTTCTGCATTTATTTGTGGATCCCTAAGCTTCCTTGACAAAATGTCATGTGGGATTGCACTTTACGCTCTTCAGTCGTTTCAAA GTGAAGCCTCACCAGTAGCCCAAGCACCGGATAGCCTATCTTCTGGTTATGTTTCAGTGACGAGATATGGTCTGGGACTGCTTCCAGCTATTTGTTCACT TGTAGGGGTTGGCGTGACGTTTACAATGAAACTCCACACACATTCGGAATACTTGACACTGCCATTGTTAGAGTAA
AA sequence Show only first row Show all	>Lus10019162 pacid=23141710 polypeptide=Lus10019162 locus=Lus10019162.g ID=Lus10019162.BGIv1.0 annot-version=v1.0 MGDNEIGDEEELSYAKSDGGRRSVFFYGVGHMLNDITSSCWFTYLLLFLADIGLSPRAAAMVMLSGQVADGFATVFVGELIDRFGNFKVWHGAGSVLVAV SFSSVFGGCLPCRFFSTGSAVVETISYSVFAAIFNVGWAATQVSHMSMVNCISLNSTTRVVLTSCRNAFTMVANLSLYAIALVVFNIIRGKSHADIENQA YLAFYVIQDLHMGQSAKALVPAIIYVSSFIVSIMMQEVSWTGRRLKAYFSVGGILWVLCGATIILLPCRMSVFMYIISGFIGIANALMMVTAVSMQSVLV GSDFNGSAFICGSLSFLDKMSCGIALYALQSFQSEASPVAQAPDSLSSGYVSVTRYGLGLLPAICSLVGVGVTFTMKLHTHSEYLTLPLLE

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G44280			Major facilitator superfamily ...		Lus10019162 [exp]	0	1
AT3G60070			Major facilitator superfamily ...		Lus10034394 [exp]	1.0	0.8417
AT2G17290		ATCPK6, ATCDPK3...	calcium dependent protein kina...		Lus10026559 [exp]	2.4	0.7949
AT1G71830		ATSERK1, SERK1	somatic embryogenesis receptor...		Lus10006056 [exp]	3.7	0.8104
AT4G10030			alpha/beta-Hydrolases superfam...		Lus10006176 [exp]	8.9	0.7617
AT1G16040			unknown protein		Lus10015585 [exp]	15.7	0.7571
AT5G07920		ATDGK1, DGK1	DIACYLGLYCEROL KINASE 1, diacy...		Lus10003460 [exp]	18.5	0.7885
AT3G17700		ATCNGC20, CNBT1	CYCLIC NUCLEOTIDE-GATED CHANNE...		Lus10031320 [exp]	20.5	0.7494
AT1G19660			Wound-responsive family protei...		Lus10007390 [exp]	21.8	0.7430
					Lus10026843 [exp]	25.7	0.6812
AT2G14910			unknown protein		Lus10013888 [exp]	35.5	0.7359

Compare expression of checked genes

Lus10019162 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.